Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0924
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013357-1|AAH13357.1| 624|Homo sapiens ring finger protein 12 ... 33 1.3
AL513007-2|CAI41712.1| 624|Homo sapiens ring finger protein 12 ... 33 1.3
AK001334-1|BAA91632.1| 624|Homo sapiens protein ( Homo sapiens ... 33 1.3
AJ271670-1|CAC14228.1| 624|Homo sapiens RING zinc finger LIM do... 33 1.3
AF155109-1|AAD42875.1| 483|Homo sapiens putative ring zinc fing... 33 1.3
EF068222-1|ABK64187.1| 2358|Homo sapiens jumonji domain-containi... 32 1.7
BX537954-1|CAD97921.1| 2210|Homo sapiens hypothetical protein pr... 32 1.7
AL831917-1|CAD38578.1| 2162|Homo sapiens hypothetical protein pr... 32 1.7
AL713895-2|CAI10948.1| 2081|Homo sapiens jumonji domain containi... 32 1.7
AL713895-1|CAI10947.1| 955|Homo sapiens jumonji domain containi... 32 1.7
AL590502-1|CAO03490.1| 2081|Homo sapiens jumonji domain containi... 32 1.7
AB037801-1|BAA92618.1| 1265|Homo sapiens KIAA1380 protein protein. 32 1.7
BC000952-1|AAH00952.1| 477|Homo sapiens hypothetical protein FL... 31 5.1
>BC013357-1|AAH13357.1| 624|Homo sapiens ring finger protein 12
protein.
Length = 624
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 163 GSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEG 324
GSGGG S ++SS ++S+ S G SET SD L E ++EG
Sbjct: 448 GSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSD--LFEGSNEG 499
>AL513007-2|CAI41712.1| 624|Homo sapiens ring finger protein 12
protein.
Length = 624
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 163 GSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEG 324
GSGGG S ++SS ++S+ S G SET SD L E ++EG
Sbjct: 448 GSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSD--LFEGSNEG 499
>AK001334-1|BAA91632.1| 624|Homo sapiens protein ( Homo sapiens
cDNA FLJ10472 fis, clone NT2RP2000054. ).
Length = 624
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 163 GSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEG 324
GSGGG S ++SS ++S+ S G SET SD L E ++EG
Sbjct: 448 GSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSD--LFEGSNEG 499
>AJ271670-1|CAC14228.1| 624|Homo sapiens RING zinc finger LIM
domain binding protein protein.
Length = 624
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 163 GSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEG 324
GSGGG S ++SS ++S+ S G SET SD L E ++EG
Sbjct: 448 GSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSD--LFEGSNEG 499
>AF155109-1|AAD42875.1| 483|Homo sapiens putative ring zinc finger
protein NY-REN-43 antigen protein.
Length = 483
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 163 GSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEG 324
GSGGG S ++SS ++S+ S G SET SD L E ++EG
Sbjct: 307 GSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSD--LFEGSNEG 358
>EF068222-1|ABK64187.1| 2358|Homo sapiens jumonji domain-containing 1
C splice variant protein.
Length = 2358
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +1
Query: 121 GSSNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDP 300
G+ N L P E + P Q+ R K N N +ER + S+S P
Sbjct: 1813 GTDNKLTPPESQSPLHWLADLAEQKAREEKKENKELTLENQIKEEREQDNSESPNGRTSP 1872
Query: 301 LLESNDE 321
L+ N+E
Sbjct: 1873 LVSQNNE 1879
>BX537954-1|CAD97921.1| 2210|Homo sapiens hypothetical protein
protein.
Length = 2210
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +1
Query: 121 GSSNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDP 300
G+ N L P E + P Q+ R K N N +ER + S+S P
Sbjct: 1690 GTDNKLTPPESQSPLHWLADLAEQKAREEKKENKELTLENQIKEEREQDNSESPNGRTSP 1749
Query: 301 LLESNDE 321
L+ N+E
Sbjct: 1750 LVSQNNE 1756
>AL831917-1|CAD38578.1| 2162|Homo sapiens hypothetical protein
protein.
Length = 2162
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +1
Query: 121 GSSNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDP 300
G+ N L P E + P Q+ R K N N +ER + S+S P
Sbjct: 1617 GTDNKLTPPESQSPLHWLADLAEQKAREEKKENKELTLENQIKEEREQDNSESPNGRTSP 1676
Query: 301 LLESNDE 321
L+ N+E
Sbjct: 1677 LVSQNNE 1683
>AL713895-2|CAI10948.1| 2081|Homo sapiens jumonji domain containing 1C
protein.
Length = 2081
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +1
Query: 121 GSSNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDP 300
G+ N L P E + P Q+ R K N N +ER + S+S P
Sbjct: 1536 GTDNKLTPPESQSPLHWLADLAEQKAREEKKENKELTLENQIKEEREQDNSESPNGRTSP 1595
Query: 301 LLESNDE 321
L+ N+E
Sbjct: 1596 LVSQNNE 1602
>AL713895-1|CAI10947.1| 955|Homo sapiens jumonji domain containing
1C protein.
Length = 955
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +1
Query: 121 GSSNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDP 300
G+ N L P E + P Q+ R K N N +ER + S+S P
Sbjct: 541 GTDNKLTPPESQSPLHWLADLAEQKAREEKKENKELTLENQIKEEREQDNSESPNGRTSP 600
Query: 301 LLESNDE 321
L+ N+E
Sbjct: 601 LVSQNNE 607
>AL590502-1|CAO03490.1| 2081|Homo sapiens jumonji domain containing 1C
protein.
Length = 2081
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +1
Query: 121 GSSNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDP 300
G+ N L P E + P Q+ R K N N +ER + S+S P
Sbjct: 1536 GTDNKLTPPESQSPLHWLADLAEQKAREEKKENKELTLENQIKEEREQDNSESPNGRTSP 1595
Query: 301 LLESNDE 321
L+ N+E
Sbjct: 1596 LVSQNNE 1602
>AB037801-1|BAA92618.1| 1265|Homo sapiens KIAA1380 protein protein.
Length = 1265
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +1
Query: 121 GSSNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDP 300
G+ N L P E + P Q+ R K N N +ER + S+S P
Sbjct: 721 GTDNKLTPPESQSPLHWLADLAEQKAREEKKENKELTLENQIKEEREQDNSESPNGRTSP 780
Query: 301 LLESNDE 321
L+ N+E
Sbjct: 781 LVSQNNE 787
>BC000952-1|AAH00952.1| 477|Homo sapiens hypothetical protein
FLJ20628 protein.
Length = 477
Score = 30.7 bits (66), Expect = 5.1
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +1
Query: 127 SNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLL 306
S P P + D G+G S R P ++ SSP D S ++ R + D +L
Sbjct: 66 SCPSLPLSISDIGTGCLSSLENLRLPTLREESSPRELEDSSGDQGRCGPTHQGSEDPSML 125
Query: 307 ESNDEGIGTDER 342
I +ER
Sbjct: 126 SQAQSAIEVEER 137
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.135 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,605,760
Number of Sequences: 237096
Number of extensions: 1683447
Number of successful extensions: 7606
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7602
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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