Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0923
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   239   1e-65
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   239   1e-65
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   187   6e-50
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.0  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  239 bits (586), Expect = 1e-65
 Identities = 112/148 (75%), Positives = 132/148 (89%)
 Frame = +3

Query: 111 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 290
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 291 FDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID 470
           FDNR+V +  Q+FK+K+K D++ N RALRRLRT CERAKRTLSS+TQASIEIDSLF+GID
Sbjct: 61  FDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGID 120

Query: 471 FYTSITRARFEELNADLFRSTMEPVGEV 554
           + T+ITRARFE++N D F+  ++PV +V
Sbjct: 121 YSTTITRARFEDINMDYFKKCIDPVDKV 148



 Score = 57.6 bits (133), Expect = 8e-11
 Identities = 24/38 (63%), Positives = 34/38 (89%)
 Frame = +1

Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660
           +K L+DAK+ K+ +H+IVLVGGSTRIPKVQ+L+ ++FN
Sbjct: 146 DKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITEYFN 183


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  239 bits (586), Expect = 1e-65
 Identities = 112/148 (75%), Positives = 132/148 (89%)
 Frame = +3

Query: 111 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 290
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 291 FDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID 470
           FDNR+V +  Q+FK+K+K D++ N RALRRLRT CERAKRTLSS+TQASIEIDSLF+GID
Sbjct: 61  FDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGID 120

Query: 471 FYTSITRARFEELNADLFRSTMEPVGEV 554
           + T+ITRARFE++N D F+  ++PV +V
Sbjct: 121 YSTTITRARFEDINMDYFKKCIDPVDKV 148



 Score = 57.6 bits (133), Expect = 8e-11
 Identities = 24/38 (63%), Positives = 34/38 (89%)
 Frame = +1

Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660
           +K L+DAK+ K+ +H+IVLVGGSTRIPKVQ+L+ ++FN
Sbjct: 146 DKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITEYFN 183


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  187 bits (456), Expect = 6e-50
 Identities = 86/148 (58%), Positives = 121/148 (81%)
 Frame = +3

Query: 111 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 290
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGED 59

Query: 291 FDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID 470
           FD +++++F++  K+K+KKD+  +K+AL++LR   E+AKR LSS  + ++ I++L    D
Sbjct: 60  FDQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYD 119

Query: 471 FYTSITRARFEELNADLFRSTMEPVGEV 554
           F  ++TRA+FEELN D F  T++PV +V
Sbjct: 120 FSETLTRAKFEELNNDQFLKTLKPVKKV 147



 Score = 55.2 bits (127), Expect = 4e-10
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = +1

Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660
           +K L DA M K QI +IVLVGGSTRIPK+Q+L++DFF+
Sbjct: 145 KKVLEDADMTKDQIDEIVLVGGSTRIPKIQQLIKDFFD 182


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 66  TKDAGTISGLNVLRIINEPTAA 131
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 1   AKLCRMQLSRFPRTSMTLKDKPQKMQVPSLA 93
           AK+C   L+  P   +++KD+  K ++  LA
Sbjct: 315 AKICFYWLNEIPTMPVSIKDQTIKEELALLA 345


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/61 (18%), Positives = 24/61 (39%)
 Frame = -2

Query: 317 KVVDHAIVKVLTSQVGVAGGGFHLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVS 138
           K++   I KVL  +   +G  +           G + G   +++D Y +    +  K + 
Sbjct: 210 KLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCKLIQ 269

Query: 137 N 135
           +
Sbjct: 270 S 270


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 256 PPPATPTWEVRTL 294
           PP   PTW VR L
Sbjct: 13  PPQEMPTWFVRWL 25


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 274  TWEVRTLTIAWSTTLSRSSRGNTKRTSLPT 363
            TW   T T  W TT +      T+ T+  T
Sbjct: 1041 TWWSSTTTSPWWTTTTTRRTTTTRPTTTST 1070


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 630 LGDTSGATHQYNIVDLSLIHLGITE 556
           LG+T  +   Y++V++S IH  + +
Sbjct: 194 LGETWTSLSVYHLVEISEIHFDLCQ 218


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 630 LGDTSGATHQYNIVDLSLIHLGITE 556
           LG+T  +   Y++V++S IH  + +
Sbjct: 190 LGETWTSLSVYHLVEISEIHFDLCQ 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,056
Number of Sequences: 336
Number of extensions: 3621
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)