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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0923
         (660 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p...   321   5e-89
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ...   316   1e-87
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc...   279   3e-76
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M...   243   2e-65
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce...   199   3e-52
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch...   139   3e-34
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom...   128   5e-31
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe...    92   7e-20
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar...    29   0.45 
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc...    29   0.78 
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    28   1.0  
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p...    26   4.2  
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ...    26   4.2  
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c...    25   7.3  
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa...    25   7.3  
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca...    25   7.3  
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |...    25   7.3  
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p...    25   9.7  
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces...    25   9.7  
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr...    25   9.7  

>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 647

 Score =  321 bits (789), Expect = 5e-89
 Identities = 155/182 (85%), Positives = 167/182 (91%)
 Frame = +3

Query: 9   VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188
           V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+   GE NVLIF
Sbjct: 137 VTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIF 196

Query: 189 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 368
           DLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF+QEFKRK KKD+  N R
Sbjct: 197 DLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNAR 256

Query: 369 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVG 548
           A+RRLRTACERAKRTLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPV 
Sbjct: 257 AVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVE 316

Query: 549 EV 554
            V
Sbjct: 317 RV 318



 Score = 62.9 bits (146), Expect = 4e-11
 Identities = 27/38 (71%), Positives = 35/38 (92%)
 Frame = +1

Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660
           E+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFN
Sbjct: 316 ERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFN 353


>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 644

 Score =  316 bits (777), Expect = 1e-87
 Identities = 153/182 (84%), Positives = 167/182 (91%)
 Frame = +3

Query: 9   VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188
           V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+    E NVLIF
Sbjct: 137 VTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIF 196

Query: 189 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 368
           DLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF QEFKRK KKD+  N R
Sbjct: 197 DLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNAR 256

Query: 369 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVG 548
           A+RRLRTACERAKRTLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPV 
Sbjct: 257 AVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVE 316

Query: 549 EV 554
           +V
Sbjct: 317 KV 318



 Score = 62.5 bits (145), Expect = 5e-11
 Identities = 26/38 (68%), Positives = 35/38 (92%)
 Frame = +1

Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660
           EK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFN
Sbjct: 316 EKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFN 353


>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 613

 Score =  279 bits (684), Expect = 3e-76
 Identities = 132/184 (71%), Positives = 157/184 (85%)
 Frame = +3

Query: 3   KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 182
           K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K    +NVL
Sbjct: 139 KRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVL 198

Query: 183 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 362
           IFDLGGGTFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +V HF+QEFKRK K D++ +
Sbjct: 199 IFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDD 258

Query: 363 KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEP 542
            RALRRLR+ACERAKR LSS TQ ++E+DSL  GIDF +SITRARFE++NA  F++T++P
Sbjct: 259 PRALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDP 318

Query: 543 VGEV 554
           V +V
Sbjct: 319 VAKV 322



 Score = 60.5 bits (140), Expect = 2e-10
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = +1

Query: 550 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660
           K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+
Sbjct: 321 KVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFD 357


>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 663

 Score =  243 bits (595), Expect = 2e-65
 Identities = 110/184 (59%), Positives = 151/184 (82%)
 Frame = +3

Query: 3   KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 182
           K V +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK  T E++++
Sbjct: 168 KPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIV 226

Query: 183 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 362
           ++DLGGGTFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+  + + RK   D+  +
Sbjct: 227 VYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRKNNVDVTKD 286

Query: 363 KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEP 542
            +A+ +L+   E+AKRTLSS     IEI+S F G DF  +++RA+FEE+N DLF+ T++P
Sbjct: 287 LKAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKP 346

Query: 543 VGEV 554
           V +V
Sbjct: 347 VEQV 350



 Score = 54.4 bits (125), Expect = 1e-08
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = +1

Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657
           E+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF
Sbjct: 348 EQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF 384


>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 674

 Score =  199 bits (486), Expect = 3e-52
 Identities = 101/184 (54%), Positives = 133/184 (72%), Gaps = 4/184 (2%)
 Frame = +3

Query: 3   KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 182
           K V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK   +  V 
Sbjct: 181 KDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKKN--DAIVA 238

Query: 183 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 362
           +FDLGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD  +V H V+ FK+    DL+ +
Sbjct: 239 VFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKD 298

Query: 363 KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI----DFYTSITRARFEELNADLFRS 530
           + A++R+R A E+AK  LSS ++  I +  +             I+RA+FE+L   L R 
Sbjct: 299 RLAVQRIREAAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRAQFEKLVDPLVRR 358

Query: 531 TMEP 542
           T++P
Sbjct: 359 TIDP 362



 Score = 38.7 bits (86), Expect = 7e-04
 Identities = 13/37 (35%), Positives = 29/37 (78%)
 Frame = +1

Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657
           +++L+DA +  ++I++++LVGG TR+P+V + ++  F
Sbjct: 364 KRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIF 400


>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
           Pss1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 720

 Score =  139 bits (337), Expect = 3e-34
 Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 4/184 (2%)
 Frame = +3

Query: 6   TVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----R 173
           +V + VI++PA+F D QR+A  +A  I+GLN LR++N+  AAA+ YG+ K    E    R
Sbjct: 140 SVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPR 199

Query: 174 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 353
            V I D G   + VSI+    G F +KST  D +LG  + D  ++++F  EFK KYK D+
Sbjct: 200 RVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDV 259

Query: 354 ATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 533
            +N +A  RL TA ER K+ LS++  A + ++ +   ID  + I R+ FEEL   L    
Sbjct: 260 LSNPKATFRLATAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERL 319

Query: 534 MEPV 545
             P+
Sbjct: 320 TPPI 323



 Score = 34.3 bits (75), Expect = 0.016
 Identities = 14/37 (37%), Positives = 26/37 (70%)
 Frame = +1

Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657
           EK+L  A + K  ++ I +VGG TR+P V++++ ++F
Sbjct: 324 EKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF 360


>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 566

 Score =  128 bits (310), Expect = 5e-31
 Identities = 61/165 (36%), Positives = 104/165 (63%)
 Frame = +3

Query: 9   VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188
           V   V++VP YF D+QR+A + A   +GL VL++I++P A  +A    ++   ++ V++ 
Sbjct: 163 VNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVA 222

Query: 189 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 368
           + G    +VS+++++ G+  + ++  D +LGGE   + +VN F +EF++K   D   N R
Sbjct: 223 NFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKKNGIDPRKNAR 282

Query: 369 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFE 503
           +L +LR  CE  KR LS+ T AS  +DSL +GIDF++SI R R++
Sbjct: 283 SLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRYD 327



 Score = 29.9 bits (64), Expect = 0.34
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +1

Query: 550 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657
           +++  A M+   I +++L GG++  PK+  L++  F
Sbjct: 343 EAVEKANMEPFDISEVILAGGASNTPKLTSLMESIF 378


>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 848

 Score = 91.9 bits (218), Expect = 7e-20
 Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
 Frame = +3

Query: 9   VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGERNVLI 185
           + + V+TVP +FN+ QR    +A  I   +VL +I++  A AI Y L +   T     +I
Sbjct: 160 ITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNII 219

Query: 186 FDLGGGTFDVSIL---TIE-------DGIFEVKSTA-GDT-HLGGEDFDNRMVNHFVQEF 329
           +D G G+   +++   T+E         I  +++ A G T  L G + + +++      F
Sbjct: 220 YDSGSGSTSATVISFDTVEGSSLGKKQNITRIRALASGFTLKLSGNEINRKLIGFMKNSF 279

Query: 330 KRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 509
            +K+  DL+ N RAL RL     R K  LS++++A   I+ L +GIDF   ITR+  E L
Sbjct: 280 YQKHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLESL 339

Query: 510 NADLFRSTMEPVGE 551
             D+  + +EP+ +
Sbjct: 340 CKDMEDAAVEPINK 353



 Score = 35.1 bits (77), Expect = 0.009
 Identities = 14/35 (40%), Positives = 25/35 (71%)
 Frame = +1

Query: 550 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDF 654
           K+L+ A +  ++I+ I+L GG++RIP +Q  L D+
Sbjct: 353 KALKKANLTFSEINSIILFGGASRIPFIQSTLADY 387


>SPBC215.10 |||haloacid dehalogenase-like
           hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 302

 Score = 29.5 bits (63), Expect = 0.45
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 337 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR*ILSLR 462
           N K+  LP  E + + +  V G   GP H+PH R LR +  LR
Sbjct: 9   NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51


>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1238

 Score = 28.7 bits (61), Expect = 0.78
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -3

Query: 295 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 185
           +KSSP K VSP V   SK  +S V  + S +P   +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 17/49 (34%), Positives = 19/49 (38%)
 Frame = -3

Query: 295 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 149
           + S PP    P  +    IP           PPPRS  ST R P P  S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381


>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 2280

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 19/57 (33%), Positives = 22/57 (38%)
 Frame = +3

Query: 147 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 317
           LDK   G+    I   GG T   SIL   +GI  VK          E F+N     F
Sbjct: 48  LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKF 104


>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 384

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 331 LNSWTKWLTMRLSKSSPPKWVSPAVDF 251
           LN   K++    SK  P  W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282


>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 807

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 18/72 (25%), Positives = 29/72 (40%)
 Frame = -3

Query: 283 PPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGSLMIR 104
           PP   S       K P   V      VP P S  S  R   P+L     I+ + G+L+++
Sbjct: 416 PPSIASSPESKRRKCPKKFVARPP--VPHPTSLYSQIRIGCPYLKPKLVISKSFGTLIVK 473

Query: 103 RTFKPEMVPASF 68
              +  ++  +F
Sbjct: 474 NHNQLSLLKCTF 485


>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1628

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 303 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASI 440
           +++ F  EFK++ K D  +    L+ L + C R  R  SS    SI
Sbjct: 711 ILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSI 756


>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
           synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 2410

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = -3

Query: 628 WGYEWSHPPVQYRGFEPYPSWHHGETSPTGSMVDLNRSAFSSSKRARVIDV*KS-IPSKR 452
           WG +     +Q++G       H+G+T   GS  D  R     SK A V D  +   P   
Sbjct: 237 WGEDGGPVSIQFKGCYVSDYDHYGDTEAFGSHPDWQRQL---SKFASVQDRLRDWKPDVA 293

Query: 451 ESISMLACV 425
           E +  L+C+
Sbjct: 294 EKLMHLSCL 302


>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 638

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 199 AVPSTCPSLPSRMVSSR*NPPPATPTW 279
           ++PST P++PS   +S  + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325


>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 676

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 204 TFDVSILTIEDGIFEVKSTAGDTHL 278
           TF   I    DG+FE     GD+HL
Sbjct: 48  TFPTEIWETRDGLFEEPVGKGDSHL 72


>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 557

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 447 LSQCSLVWTMTRSSLPSHMQYANA 376
           +S C ++WTM+    P HM    A
Sbjct: 265 MSFCGVIWTMSGYDAPFHMSEETA 288


>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 1060

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 562 HGETSPTGSMVDLNRSAFSSSKRARV 485
           +G T+P+ +  D NRS  SSS R+ +
Sbjct: 50  NGTTNPSSNFNDSNRSNISSSLRSEM 75


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,932,506
Number of Sequences: 5004
Number of extensions: 61479
Number of successful extensions: 248
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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