BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0923 (660 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 321 5e-89 SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 316 1e-87 SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 279 3e-76 SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 243 2e-65 SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 199 3e-52 SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 139 3e-34 SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 128 5e-31 SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 92 7e-20 SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 29 0.45 SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 0.78 SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.0 SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 4.2 SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 26 4.2 SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 25 7.3 SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 7.3 SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 25 7.3 SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 7.3 SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 9.7 SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 25 9.7 SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 9.7 >SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces pombe|chr 3|||Manual Length = 647 Score = 321 bits (789), Expect = 5e-89 Identities = 155/182 (85%), Positives = 167/182 (91%) Frame = +3 Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188 V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIF Sbjct: 137 VTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIF 196 Query: 189 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 368 DLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF+QEFKRK KKD+ N R Sbjct: 197 DLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNAR 256 Query: 369 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVG 548 A+RRLRTACERAKRTLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPV Sbjct: 257 AVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVE 316 Query: 549 EV 554 V Sbjct: 317 RV 318 Score = 62.9 bits (146), Expect = 4e-11 Identities = 27/38 (71%), Positives = 35/38 (92%) Frame = +1 Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660 E+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFN Sbjct: 316 ERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFN 353 >SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces pombe|chr 1|||Manual Length = 644 Score = 316 bits (777), Expect = 1e-87 Identities = 153/182 (84%), Positives = 167/182 (91%) Frame = +3 Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188 V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIF Sbjct: 137 VTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIF 196 Query: 189 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 368 DLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF QEFKRK KKD+ N R Sbjct: 197 DLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNAR 256 Query: 369 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVG 548 A+RRLRTACERAKRTLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPV Sbjct: 257 AVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVE 316 Query: 549 EV 554 +V Sbjct: 317 KV 318 Score = 62.5 bits (145), Expect = 5e-11 Identities = 26/38 (68%), Positives = 35/38 (92%) Frame = +1 Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660 EK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFN Sbjct: 316 EKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFN 353 >SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces pombe|chr 2|||Manual Length = 613 Score = 279 bits (684), Expect = 3e-76 Identities = 132/184 (71%), Positives = 157/184 (85%) Frame = +3 Query: 3 KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 182 K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVL Sbjct: 139 KRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVL 198 Query: 183 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 362 IFDLGGGTFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +V HF+QEFKRK K D++ + Sbjct: 199 IFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDD 258 Query: 363 KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEP 542 RALRRLR+ACERAKR LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++P Sbjct: 259 PRALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDP 318 Query: 543 VGEV 554 V +V Sbjct: 319 VAKV 322 Score = 60.5 bits (140), Expect = 2e-10 Identities = 26/37 (70%), Positives = 33/37 (89%) Frame = +1 Query: 550 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660 K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+ Sbjct: 321 KVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFD 357 >SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual Length = 663 Score = 243 bits (595), Expect = 2e-65 Identities = 110/184 (59%), Positives = 151/184 (82%) Frame = +3 Query: 3 KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 182 K V +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++ Sbjct: 168 KPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIV 226 Query: 183 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 362 ++DLGGGTFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+ + + RK D+ + Sbjct: 227 VYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRKNNVDVTKD 286 Query: 363 KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEP 542 +A+ +L+ E+AKRTLSS IEI+S F G DF +++RA+FEE+N DLF+ T++P Sbjct: 287 LKAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKP 346 Query: 543 VGEV 554 V +V Sbjct: 347 VEQV 350 Score = 54.4 bits (125), Expect = 1e-08 Identities = 24/37 (64%), Positives = 32/37 (86%) Frame = +1 Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657 E+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF Sbjct: 348 EQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF 384 >SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces pombe|chr 1|||Manual Length = 674 Score = 199 bits (486), Expect = 3e-52 Identities = 101/184 (54%), Positives = 133/184 (72%), Gaps = 4/184 (2%) Frame = +3 Query: 3 KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 182 K V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V Sbjct: 181 KDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKKN--DAIVA 238 Query: 183 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 362 +FDLGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD +V H V+ FK+ DL+ + Sbjct: 239 VFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKD 298 Query: 363 KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI----DFYTSITRARFEELNADLFRS 530 + A++R+R A E+AK LSS ++ I + + I+RA+FE+L L R Sbjct: 299 RLAVQRIREAAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRAQFEKLVDPLVRR 358 Query: 531 TMEP 542 T++P Sbjct: 359 TIDP 362 Score = 38.7 bits (86), Expect = 7e-04 Identities = 13/37 (35%), Positives = 29/37 (78%) Frame = +1 Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657 +++L+DA + ++I++++LVGG TR+P+V + ++ F Sbjct: 364 KRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIF 400 >SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Schizosaccharomyces pombe|chr 1|||Manual Length = 720 Score = 139 bits (337), Expect = 3e-34 Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 4/184 (2%) Frame = +3 Query: 6 TVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----R 173 +V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R Sbjct: 140 SVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPR 199 Query: 174 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 353 V I D G + VSI+ G F +KST D +LG + D ++++F EFK KYK D+ Sbjct: 200 RVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDV 259 Query: 354 ATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 533 +N +A RL TA ER K+ LS++ A + ++ + ID + I R+ FEEL L Sbjct: 260 LSNPKATFRLATAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERL 319 Query: 534 MEPV 545 P+ Sbjct: 320 TPPI 323 Score = 34.3 bits (75), Expect = 0.016 Identities = 14/37 (37%), Positives = 26/37 (70%) Frame = +1 Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657 EK+L A + K ++ I +VGG TR+P V++++ ++F Sbjct: 324 EKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF 360 >SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pombe|chr 1|||Manual Length = 566 Score = 128 bits (310), Expect = 5e-31 Identities = 61/165 (36%), Positives = 104/165 (63%) Frame = +3 Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188 V V++VP YF D+QR+A + A +GL VL++I++P A +A ++ ++ V++ Sbjct: 163 VNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVA 222 Query: 189 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 368 + G +VS+++++ G+ + ++ D +LGGE + +VN F +EF++K D N R Sbjct: 223 NFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKKNGIDPRKNAR 282 Query: 369 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFE 503 +L +LR CE KR LS+ T AS +DSL +GIDF++SI R R++ Sbjct: 283 SLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRYD 327 Score = 29.9 bits (64), Expect = 0.34 Identities = 10/36 (27%), Positives = 22/36 (61%) Frame = +1 Query: 550 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657 +++ A M+ I +++L GG++ PK+ L++ F Sbjct: 343 EAVEKANMEPFDISEVILAGGASNTPKLTSLMESIF 378 >SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 848 Score = 91.9 bits (218), Expect = 7e-20 Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 13/194 (6%) Frame = +3 Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGERNVLI 185 + + V+TVP +FN+ QR +A I +VL +I++ A AI Y L + T +I Sbjct: 160 ITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNII 219 Query: 186 FDLGGGTFDVSIL---TIE-------DGIFEVKSTA-GDT-HLGGEDFDNRMVNHFVQEF 329 +D G G+ +++ T+E I +++ A G T L G + + +++ F Sbjct: 220 YDSGSGSTSATVISFDTVEGSSLGKKQNITRIRALASGFTLKLSGNEINRKLIGFMKNSF 279 Query: 330 KRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 509 +K+ DL+ N RAL RL R K LS++++A I+ L +GIDF ITR+ E L Sbjct: 280 YQKHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLESL 339 Query: 510 NADLFRSTMEPVGE 551 D+ + +EP+ + Sbjct: 340 CKDMEDAAVEPINK 353 Score = 35.1 bits (77), Expect = 0.009 Identities = 14/35 (40%), Positives = 25/35 (71%) Frame = +1 Query: 550 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDF 654 K+L+ A + ++I+ I+L GG++RIP +Q L D+ Sbjct: 353 KALKKANLTFSEINSIILFGGASRIPFIQSTLADY 387 >SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosaccharomyces pombe|chr 2|||Manual Length = 302 Score = 29.5 bits (63), Expect = 0.45 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +1 Query: 337 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR*ILSLR 462 N K+ LP E + + + V G GP H+PH R LR + LR Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51 >SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1238 Score = 28.7 bits (61), Expect = 0.78 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = -3 Query: 295 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 185 +KSSP K VSP V SK +S V + S +P +K Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239 >SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 574 Score = 28.3 bits (60), Expect = 1.0 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = -3 Query: 295 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 149 + S PP P + IP PPPRS ST R P P S Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381 >SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces pombe|chr 1|||Manual Length = 2280 Score = 26.2 bits (55), Expect = 4.2 Identities = 19/57 (33%), Positives = 22/57 (38%) Frame = +3 Query: 147 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 317 LDK G+ I GG T SIL +GI VK E F+N F Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKF 104 >SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr 3|||Manual Length = 384 Score = 26.2 bits (55), Expect = 4.2 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 331 LNSWTKWLTMRLSKSSPPKWVSPAVDF 251 LN K++ SK P W+SPA DF Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282 >SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr 2|||Manual Length = 807 Score = 25.4 bits (53), Expect = 7.3 Identities = 18/72 (25%), Positives = 29/72 (40%) Frame = -3 Query: 283 PPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGSLMIR 104 PP S K P V VP P S S R P+L I+ + G+L+++ Sbjct: 416 PPSIASSPESKRRKCPKKFVARPP--VPHPTSLYSQIRIGCPYLKPKLVISKSFGTLIVK 473 Query: 103 RTFKPEMVPASF 68 + ++ +F Sbjct: 474 NHNQLSLLKCTF 485 >SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1628 Score = 25.4 bits (53), Expect = 7.3 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +3 Query: 303 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASI 440 +++ F EFK++ K D + L+ L + C R R SS SI Sbjct: 711 ILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSI 756 >SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual Length = 2410 Score = 25.4 bits (53), Expect = 7.3 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Frame = -3 Query: 628 WGYEWSHPPVQYRGFEPYPSWHHGETSPTGSMVDLNRSAFSSSKRARVIDV*KS-IPSKR 452 WG + +Q++G H+G+T GS D R SK A V D + P Sbjct: 237 WGEDGGPVSIQFKGCYVSDYDHYGDTEAFGSHPDWQRQL---SKFASVQDRLRDWKPDVA 293 Query: 451 ESISMLACV 425 E + L+C+ Sbjct: 294 EKLMHLSCL 302 >SPAC4G9.04c |||cleavage and polyadenylation specificity factor |Schizosaccharomyces pombe|chr 1|||Manual Length = 638 Score = 25.4 bits (53), Expect = 7.3 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +1 Query: 199 AVPSTCPSLPSRMVSSR*NPPPATPTW 279 ++PST P++PS +S + PP T ++ Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325 >SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 676 Score = 25.0 bits (52), Expect = 9.7 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +3 Query: 204 TFDVSILTIEDGIFEVKSTAGDTHL 278 TF I DG+FE GD+HL Sbjct: 48 TFPTEIWETRDGLFEEPVGKGDSHL 72 >SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces pombe|chr 3|||Manual Length = 557 Score = 25.0 bits (52), Expect = 9.7 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = -1 Query: 447 LSQCSLVWTMTRSSLPSHMQYANA 376 +S C ++WTM+ P HM A Sbjct: 265 MSFCGVIWTMSGYDAPFHMSEETA 288 >SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 1060 Score = 25.0 bits (52), Expect = 9.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 562 HGETSPTGSMVDLNRSAFSSSKRARV 485 +G T+P+ + D NRS SSS R+ + Sbjct: 50 NGTTNPSSNFNDSNRSNISSSLRSEM 75 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,932,506 Number of Sequences: 5004 Number of extensions: 61479 Number of successful extensions: 248 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 215 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 244 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 299817502 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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