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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0923
         (660 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)                      326   1e-89
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)             318   2e-87
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)                       315   2e-86
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)                      253   8e-68
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)                153   1e-37
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)             136   1e-32
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)             116   1e-26
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)             105   3e-23
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)                 85   4e-17
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)              71   6e-13
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)                 49   4e-06
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.051
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.21 
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.83 
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)                   31   1.1  
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)                      30   1.9  
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)               30   1.9  
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)              29   2.5  
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)              29   2.5  
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)                    29   2.5  
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)            29   2.5  
SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.5  
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.4  
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.4  
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)               28   5.9  
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)                      28   5.9  
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)                     28   7.7  
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)                  28   7.7  
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)                 28   7.7  
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)                    28   7.7  
SB_23904| Best HMM Match : RdRP (HMM E-Value=0)                        28   7.7  

>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1097

 Score =  326 bits (801), Expect = 1e-89
 Identities = 156/179 (87%), Positives = 170/179 (94%)
 Frame = +3

Query: 9   VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188
           V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK   ERNVLI+
Sbjct: 139 VTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIY 198

Query: 189 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 368
           DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+  NKR
Sbjct: 199 DLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPNKR 258

Query: 369 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 545
           A+RRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELN DLF+ T EPV
Sbjct: 259 AMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPV 317



 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 25/39 (64%), Positives = 33/39 (84%), Gaps = 2/39 (5%)
 Frame = +1

Query: 547 EKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFF 657
           E+++RD+K+   K  IHDIVLVGGSTRIPK+QK+LQ+ F
Sbjct: 318 EQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELF 356


>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 746

 Score =  318 bits (782), Expect = 2e-87
 Identities = 153/179 (85%), Positives = 167/179 (93%)
 Frame = +3

Query: 9   VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188
           V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK   ERNVLIF
Sbjct: 232 VTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIF 291

Query: 189 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 368
           DLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD+  NKR
Sbjct: 292 DLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITPNKR 351

Query: 369 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 545
           ALRRLRTACERAKRTLSSSTQASIEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPV
Sbjct: 352 ALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPV 410



 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 24/39 (61%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
 Frame = +1

Query: 547 EKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFN 660
           EK+++D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFN
Sbjct: 411 EKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFN 449



 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +3

Query: 9   VQNAVITVPAYFNDSQRQATKDAG 80
           V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 164 VTDAVVTVPAYFNDSQRQATKDAG 187


>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 640

 Score =  315 bits (774), Expect = 2e-86
 Identities = 150/182 (82%), Positives = 170/182 (93%), Gaps = 1/182 (0%)
 Frame = +3

Query: 9   VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188
           V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK  +GE+NVLIF
Sbjct: 139 VTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIF 198

Query: 189 DLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNK 365
           DLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD++ N 
Sbjct: 199 DLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNS 258

Query: 366 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 545
           RA+RRLRTACERAKRTLSSST+ASIE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV
Sbjct: 259 RAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPV 318

Query: 546 GE 551
            +
Sbjct: 319 NK 320



 Score = 57.6 bits (133), Expect = 8e-09
 Identities = 22/37 (59%), Positives = 33/37 (89%)
 Frame = +1

Query: 550 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660
           K+L DAK  K+ IH++VLVGGSTR+PK+QK+L+++F+
Sbjct: 320 KALSDAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFS 356


>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1327

 Score =  253 bits (620), Expect = 8e-68
 Identities = 118/184 (64%), Positives = 153/184 (83%)
 Frame = +3

Query: 3    KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 182
            K V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK  GE+N+L
Sbjct: 835  KKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNIL 893

Query: 183  IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 362
            +FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD  ++ HF++ +K+K  K++  +
Sbjct: 894  VFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRKD 953

Query: 363  KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEP 542
             RA+++LR   E+AKR LS+  QA +EI+S FEG DF   +TRARFEELNA LF+ST++P
Sbjct: 954  NRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKP 1013

Query: 543  VGEV 554
            V +V
Sbjct: 1014 VQKV 1017



 Score = 57.6 bits (133), Expect = 8e-09
 Identities = 25/37 (67%), Positives = 33/37 (89%)
 Frame = +1

Query: 547  EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657
            +K L DA + K++IH+IVLVGGSTRIPKVQ+L++DFF
Sbjct: 1015 QKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFF 1051


>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
          Length = 437

 Score =  153 bits (371), Expect = 1e-37
 Identities = 81/188 (43%), Positives = 122/188 (64%), Gaps = 5/188 (2%)
 Frame = +3

Query: 6   TVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLI 185
           TV  AV++VPA F+  QR AT  A +++G+ VLR+INEPTAAA+AYGL KK  G  NV++
Sbjct: 168 TVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMV 226

Query: 186 FDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNK 365
            DLGGGT DVS+L I+ G+F   + AG+  LGG+DF+ R + + +Q   +++ + L T  
Sbjct: 227 VDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQL-TCS 285

Query: 366 RALRRLRTACERAKRTLSSSTQASIE--IDSLFEG---IDFYTSITRARFEELNADLFRS 530
             ++RLR   E AK  L+ + + +I+  + SL EG   + F  +I+R  FE +N DLF+ 
Sbjct: 286 EDIQRLRQEVEAAKINLTRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKK 345

Query: 531 TMEPVGEV 554
            ++P+  V
Sbjct: 346 VLQPIRRV 353



 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 16/35 (45%), Positives = 30/35 (85%)
 Frame = +1

Query: 556 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660
           L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+
Sbjct: 354 LAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFD 388


>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1068

 Score =  136 bits (329), Expect = 1e-32
 Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 4/183 (2%)
 Frame = +3

Query: 9   VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE---RNV 179
           V + VI+VP+Y+ D QR+   DA   +GLN LR++N+ TA ++AYG+ K+       RNV
Sbjct: 196 VTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNV 255

Query: 180 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLAT 359
           +  D+G  +  V I     G  +V STA + +LGG DFD  +V HF QEFK KYK D+ +
Sbjct: 256 VFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVHS 315

Query: 360 NKRALRRLRTACERAKRTLSSST-QASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 536
           + +A  +L   CE+ K+ +S++T +  I I+   E  D +  + RA+FEEL ADL +   
Sbjct: 316 SIKAKIKLGAECEKLKKLMSANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVE 375

Query: 537 EPV 545
            P+
Sbjct: 376 APL 378


>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 766

 Score =  116 bits (280), Expect = 1e-26
 Identities = 58/126 (46%), Positives = 82/126 (65%), Gaps = 4/126 (3%)
 Frame = +3

Query: 177 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 356
           + ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++   + EFK++   DL+
Sbjct: 2   IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61

Query: 357 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLF 524
            +  AL+RLR A E+AK  LSSS Q  I +  +             ++R++FE L ADL 
Sbjct: 62  KDSMALQRLREAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADLI 121

Query: 525 RSTMEP 542
             T+ P
Sbjct: 122 NRTVGP 127



 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 20/37 (54%), Positives = 31/37 (83%)
 Frame = +1

Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657
           +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F
Sbjct: 129 KKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF 165


>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1019

 Score =  105 bits (252), Expect = 3e-23
 Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 18/197 (9%)
 Frame = +3

Query: 9   VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERN 176
           +++ V+TVP +FN ++R+A   A  + GLNVL+I+N  TA A+ YGL ++     T E++
Sbjct: 105 IKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKH 164

Query: 177 VLIFDLGGGTFDVSIL------TIEDGIFE------VKSTAGDTHLGGEDFDNRMVNHFV 320
            + +D+G  +   +I+      T + GI E      +K    D  LGG   D R+ +H V
Sbjct: 165 FMFYDMGASSTVATIVGYSMTKTKDRGISETAPQLVIKGIGFDRTLGGHAIDMRLRDHLV 224

Query: 321 QEFKR--KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRA 494
           Q FK+  K+K ++  + RA+ +      R K+ LS++ +   +I+ +F+G DF   +TR 
Sbjct: 225 QLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFAQIEGVFDGKDFRVKVTRE 284

Query: 495 RFEELNADLFRSTMEPV 545
             EE+  DLF     PV
Sbjct: 285 ELEEMCQDLFDRVAGPV 301



 Score = 33.9 bits (74), Expect = 0.12
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 550 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 645
           ++L+ A M    I  +VLVGG  R+PKVQ  L
Sbjct: 303 RALKSASMTMNDIDSVVLVGGGIRVPKVQDAL 334


>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
          Length = 592

 Score = 85.4 bits (202), Expect = 4e-17
 Identities = 43/113 (38%), Positives = 72/113 (63%), Gaps = 5/113 (4%)
 Frame = +3

Query: 168 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR---- 335
           +  VL++ LGG + DV++L++ +G+++V +T  D  LGG +FD  +++    +FKR    
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLL 212

Query: 336 -KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITR 491
            K+K D  TNKR+  +L+T+ E+ K  LS+   A+  +DSL EGIDF   ++R
Sbjct: 213 WKWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQGQVSR 265


>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
          Length = 179

 Score = 71.3 bits (167), Expect = 6e-13
 Identities = 47/84 (55%), Positives = 53/84 (63%), Gaps = 26/84 (30%)
 Frame = +3

Query: 3   KTVQNAVITVPAYFNDSQRQATKDAGTISGLN------------------------VLRI 110
           + V+ AVITVPA+FND+QRQATKDAGTI+GL+                        VLRI
Sbjct: 36  QAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRI 95

Query: 111 INEPTAAAIAYGLDKK--GTGERN 176
           INEPTAAAIAYGLDK   G  ERN
Sbjct: 96  INEPTAAAIAYGLDKARGGKAERN 119


>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
          Length = 212

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 20/37 (54%), Positives = 31/37 (83%)
 Frame = +1

Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657
           +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F
Sbjct: 74  KKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF 110


>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 168

 Score = 35.1 bits (77), Expect = 0.051
 Identities = 12/29 (41%), Positives = 24/29 (82%)
 Frame = +1

Query: 571 MDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657
           + ++ +  ++LVGG+TR PK+Q+LL+++F
Sbjct: 35  LKQSSMIQVILVGGATRTPKIQQLLKNYF 63


>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3235

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +3

Query: 126  AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 293
            A A    L  +G  E  +   D G GT  VS + +E+G +++     D H+ G  F
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560



 Score = 31.1 bits (67), Expect = 0.83
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 174  NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 293
            + LI D   G+F VS    E+GI ++    GD H+ G  F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467



 Score = 28.7 bits (61), Expect = 4.4
 Identities = 19/64 (29%), Positives = 27/64 (42%)
 Frame = +3

Query: 114  NEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 293
            N P     A  +   GT E   +I DLG G + +  +  E G   V     +TH+ G  F
Sbjct: 3007 NAPVGKVSATVIAPSGT-ESKAVISDLGKGNYAIRFVPKEFGDHLVNVKFDETHIPGSPF 3065

Query: 294  DNRM 305
              R+
Sbjct: 3066 KIRV 3069


>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 956

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 314 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 406
           LCP  ++  + GP +++E   AFA C+  GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199


>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
          Length = 634

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +3

Query: 177 VLIFDLGGGTFDVSILTIEDGIFEVK 254
           V I+DLG GT++++IL  E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344


>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 382

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 305 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 394
           G  LCP  ++  + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247


>SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)
          Length = 1318

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = -3

Query: 328 NSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 149
           N+   +L  +L    P KW  P  D +S  P   V +   +  PP    S   +  PF+S
Sbjct: 346 NALGYYLATKLQTEDPTKW-PPRYDDSSHFPHLWVVLSYDESTPPPRDGSAKPATQPFVS 404

Query: 148 RP 143
           +P
Sbjct: 405 QP 406


>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
          Length = 600

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 183 IFDLGGGTFDVSILTIEDGIFEV 251
           +FDLG G+++V  L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333


>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
          Length = 774

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
 Frame = +1

Query: 187 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 330
           L S+A  +T P+LP  +V+ R  PPP+T   ++ T+ T+  STT + S+
Sbjct: 97  LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141


>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
          Length = 799

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 274 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 158
           +++PA+   S +PS  V +D   VP P   I+  +  VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305


>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
          Length = 452

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 314 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 406
           LCP  ++    GP +++E S AFA C+  GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236


>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
          Length = 647

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 256 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 372
           PPPA  T E   L T +W+ T S + R   KRT LPT  L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474


>SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 886

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = -3

Query: 646 AGASAPWGYEWSHPPVQYRGFEPYPSWHHGETSPTGSMVDLNRSAFSSSKRARVIDV*KS 467
           A  +APWG + ++ P++   F P     H   + T S VD + S F   + A  +DV  S
Sbjct: 632 AAMAAPWGQQPANAPLE---FPPSSEEEHDGLAATESGVDAS-SGFWDEESADELDVDAS 687

Query: 466 IPSKRESISMLA 431
             S +   S  A
Sbjct: 688 SSSSQNPFSQQA 699


>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1324

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
 Frame = -2

Query: 260 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 93
           G F L D+   G++GH EG+ +EV   + ++   +  F +T    S S   F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344

Query: 92  ---ARDGTC 75
              AR  TC
Sbjct: 345 VYNARISTC 353



 Score = 29.1 bits (62), Expect = 3.4
 Identities = 22/75 (29%), Positives = 32/75 (42%)
 Frame = -3

Query: 319  TKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP* 140
            + W+     KS   K   P    +S + SS     TSK PP  + +ST  SP        
Sbjct: 1244 SSWMVTNCQKSC--KRCPPEPPTSSIMQSSSNIPTTSKTPPSSTCLSTAVSPAAGADSNN 1301

Query: 139  AIAAAVGSLMIRRTF 95
            A+  A+ SL++   F
Sbjct: 1302 AVNVAISSLVLPSLF 1316


>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 87

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = +1

Query: 583 QIHDIVLVGGSTRIPKVQKLLQDFF 657
           +I  + +VGGSTRIP ++ ++++ F
Sbjct: 6   EIDSVEIVGGSTRIPAIKDIIKNVF 30


>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 833

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 190 TSAAVPSTCPSLPSRMVSSR*NPPPATP 273
           T  A P   P++PSR   +R  PPP  P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811


>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
          Length = 439

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 314 LCPGVQEEIQKGPRYQQESS*AFAYCM 394
           LCP  ++  + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133


>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
          Length = 533

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 314 LCPGVQEEIQKGPRYQQESS*AFAYCM 394
           LCP  ++  + GP +++E S AFA C+
Sbjct: 74  LCPLPEQNGEPGPMFEREGSDAFANCV 100


>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
          Length = 1557

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -3

Query: 313 WLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP 143
           +   +L    P KW     D T  I   +V       PPPR   +   + +PF+S+P
Sbjct: 558 YFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRDGTAKL-ATLPFVSQP 613


>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 557

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 17/74 (22%), Positives = 34/74 (45%)
 Frame = +3

Query: 300 RMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYT 479
           + +N    +   +++K  A   R     +    +A  T+SS +    +I  L E +  YT
Sbjct: 198 QFINSTNSKTLEEHQKTRADLARLWAHSQELWNQANETVSSISTVKEKITQLDEKLSEYT 257

Query: 480 SITRARFEELNADL 521
           + T  R +++ AD+
Sbjct: 258 NRTMERIDQIKADM 271


>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
          Length = 1080

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 9    VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTG 167
            + NA +T+P YF     + +K  G   G+ +   +++     I+Y LD+K TG
Sbjct: 1020 IYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--AMSKERNQEISYKLDRKWTG 1070


>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
          Length = 312

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = +1

Query: 208 STCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPTREL 372
           S CPSLP+    S       TP +     TI   T  + SS   T  TS PT ++
Sbjct: 46  SLCPSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSS---TSSTSKPTEDV 97


>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
          Length = 1774

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 185 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 99
           +K ISF  +LF+  VSN S+ R+I  +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780


>SB_23904| Best HMM Match : RdRP (HMM E-Value=0)
          Length = 1511

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +2

Query: 488  SCSLRGAERRSVQVYHGASGRSLSVMPR 571
            SC +RGAER++ ++    +G  +++ P+
Sbjct: 1028 SCLIRGAERKTAKMLQQKTGAKITIRPK 1055


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,724,661
Number of Sequences: 59808
Number of extensions: 491570
Number of successful extensions: 1819
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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