Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0923
(660 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 326 1e-89
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 318 2e-87
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 315 2e-86
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 253 8e-68
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 153 1e-37
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 85 4e-17
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 71 6e-13
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 49 4e-06
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.1
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) 30 1.9
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 1.9
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 2.5
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 2.5
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 2.5
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 2.5
SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 5.9
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 5.9
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 28 7.7
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 28 7.7
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 28 7.7
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.7
SB_23904| Best HMM Match : RdRP (HMM E-Value=0) 28 7.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 326 bits (801), Expect = 1e-89
Identities = 156/179 (87%), Positives = 170/179 (94%)
Frame = +3
Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188
V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+
Sbjct: 139 VTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIY 198
Query: 189 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 368
DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+ NKR
Sbjct: 199 DLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPNKR 258
Query: 369 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 545
A+RRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELN DLF+ T EPV
Sbjct: 259 AMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPV 317
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/39 (64%), Positives = 33/39 (84%), Gaps = 2/39 (5%)
Frame = +1
Query: 547 EKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFF 657
E+++RD+K+ K IHDIVLVGGSTRIPK+QK+LQ+ F
Sbjct: 318 EQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELF 356
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 318 bits (782), Expect = 2e-87
Identities = 153/179 (85%), Positives = 167/179 (93%)
Frame = +3
Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188
V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIF
Sbjct: 232 VTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIF 291
Query: 189 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 368
DLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD+ NKR
Sbjct: 292 DLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITPNKR 351
Query: 369 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 545
ALRRLRTACERAKRTLSSSTQASIEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPV
Sbjct: 352 ALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPV 410
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/39 (61%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
Frame = +1
Query: 547 EKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFN 660
EK+++D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFN
Sbjct: 411 EKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFN 449
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 9 VQNAVITVPAYFNDSQRQATKDAG 80
V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 164 VTDAVVTVPAYFNDSQRQATKDAG 187
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 315 bits (774), Expect = 2e-86
Identities = 150/182 (82%), Positives = 170/182 (93%), Gaps = 1/182 (0%)
Frame = +3
Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188
V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIF
Sbjct: 139 VTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIF 198
Query: 189 DLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNK 365
DLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD++ N
Sbjct: 199 DLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNS 258
Query: 366 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 545
RA+RRLRTACERAKRTLSSST+ASIE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV
Sbjct: 259 RAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPV 318
Query: 546 GE 551
+
Sbjct: 319 NK 320
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/37 (59%), Positives = 33/37 (89%)
Frame = +1
Query: 550 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660
K+L DAK K+ IH++VLVGGSTR+PK+QK+L+++F+
Sbjct: 320 KALSDAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFS 356
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 253 bits (620), Expect = 8e-68
Identities = 118/184 (64%), Positives = 153/184 (83%)
Frame = +3
Query: 3 KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 182
K V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L
Sbjct: 835 KKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNIL 893
Query: 183 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 362
+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K++ +
Sbjct: 894 VFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRKD 953
Query: 363 KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEP 542
RA+++LR E+AKR LS+ QA +EI+S FEG DF +TRARFEELNA LF+ST++P
Sbjct: 954 NRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKP 1013
Query: 543 VGEV 554
V +V
Sbjct: 1014 VQKV 1017
Score = 57.6 bits (133), Expect = 8e-09
Identities = 25/37 (67%), Positives = 33/37 (89%)
Frame = +1
Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657
+K L DA + K++IH+IVLVGGSTRIPKVQ+L++DFF
Sbjct: 1015 QKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFF 1051
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 153 bits (371), Expect = 1e-37
Identities = 81/188 (43%), Positives = 122/188 (64%), Gaps = 5/188 (2%)
Frame = +3
Query: 6 TVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLI 185
TV AV++VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++
Sbjct: 168 TVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMV 226
Query: 186 FDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNK 365
DLGGGT DVS+L I+ G+F + AG+ LGG+DF+ R + + +Q +++ + L T
Sbjct: 227 VDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQL-TCS 285
Query: 366 RALRRLRTACERAKRTLSSSTQASIE--IDSLFEG---IDFYTSITRARFEELNADLFRS 530
++RLR E AK L+ + + +I+ + SL EG + F +I+R FE +N DLF+
Sbjct: 286 EDIQRLRQEVEAAKINLTRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKK 345
Query: 531 TMEPVGEV 554
++P+ V
Sbjct: 346 VLQPIRRV 353
Score = 46.0 bits (104), Expect = 3e-05
Identities = 16/35 (45%), Positives = 30/35 (85%)
Frame = +1
Query: 556 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660
L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+
Sbjct: 354 LAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFD 388
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 136 bits (329), Expect = 1e-32
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 4/183 (2%)
Frame = +3
Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE---RNV 179
V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV
Sbjct: 196 VTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNV 255
Query: 180 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLAT 359
+ D+G + V I G +V STA + +LGG DFD +V HF QEFK KYK D+ +
Sbjct: 256 VFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVHS 315
Query: 360 NKRALRRLRTACERAKRTLSSST-QASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 536
+ +A +L CE+ K+ +S++T + I I+ E D + + RA+FEEL ADL +
Sbjct: 316 SIKAKIKLGAECEKLKKLMSANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVE 375
Query: 537 EPV 545
P+
Sbjct: 376 APL 378
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 116 bits (280), Expect = 1e-26
Identities = 58/126 (46%), Positives = 82/126 (65%), Gaps = 4/126 (3%)
Frame = +3
Query: 177 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 356
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
Query: 357 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLF 524
+ AL+RLR A E+AK LSSS Q I + + ++R++FE L ADL
Sbjct: 62 KDSMALQRLREAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADLI 121
Query: 525 RSTMEP 542
T+ P
Sbjct: 122 NRTVGP 127
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/37 (54%), Positives = 31/37 (83%)
Frame = +1
Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657
+K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F
Sbjct: 129 KKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF 165
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 105 bits (252), Expect = 3e-23
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 18/197 (9%)
Frame = +3
Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERN 176
+++ V+TVP +FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++
Sbjct: 105 IKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKH 164
Query: 177 VLIFDLGGGTFDVSIL------TIEDGIFE------VKSTAGDTHLGGEDFDNRMVNHFV 320
+ +D+G + +I+ T + GI E +K D LGG D R+ +H V
Sbjct: 165 FMFYDMGASSTVATIVGYSMTKTKDRGISETAPQLVIKGIGFDRTLGGHAIDMRLRDHLV 224
Query: 321 QEFKR--KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRA 494
Q FK+ K+K ++ + RA+ + R K+ LS++ + +I+ +F+G DF +TR
Sbjct: 225 QLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFAQIEGVFDGKDFRVKVTRE 284
Query: 495 RFEELNADLFRSTMEPV 545
EE+ DLF PV
Sbjct: 285 ELEEMCQDLFDRVAGPV 301
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 550 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 645
++L+ A M I +VLVGG R+PKVQ L
Sbjct: 303 RALKSASMTMNDIDSVVLVGGGIRVPKVQDAL 334
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 85.4 bits (202), Expect = 4e-17
Identities = 43/113 (38%), Positives = 72/113 (63%), Gaps = 5/113 (4%)
Frame = +3
Query: 168 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR---- 335
+ VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLL 212
Query: 336 -KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITR 491
K+K D TNKR+ +L+T+ E+ K LS+ A+ +DSL EGIDF ++R
Sbjct: 213 WKWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 71.3 bits (167), Expect = 6e-13
Identities = 47/84 (55%), Positives = 53/84 (63%), Gaps = 26/84 (30%)
Frame = +3
Query: 3 KTVQNAVITVPAYFNDSQRQATKDAGTISGLN------------------------VLRI 110
+ V+ AVITVPA+FND+QRQATKDAGTI+GL+ VLRI
Sbjct: 36 QAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRI 95
Query: 111 INEPTAAAIAYGLDKK--GTGERN 176
INEPTAAAIAYGLDK G ERN
Sbjct: 96 INEPTAAAIAYGLDKARGGKAERN 119
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/37 (54%), Positives = 31/37 (83%)
Frame = +1
Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657
+K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F
Sbjct: 74 KKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF 110
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 35.1 bits (77), Expect = 0.051
Identities = 12/29 (41%), Positives = 24/29 (82%)
Frame = +1
Query: 571 MDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657
+ ++ + ++LVGG+TR PK+Q+LL+++F
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYF 63
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 126 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 293
A A L +G E + D G GT VS + +E+G +++ D H+ G F
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 31.1 bits (67), Expect = 0.83
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 174 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 293
+ LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +3
Query: 114 NEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 293
N P A + GT E +I DLG G + + + E G V +TH+ G F
Sbjct: 3007 NAPVGKVSATVIAPSGT-ESKAVISDLGKGNYAIRFVPKEFGDHLVNVKFDETHIPGSPF 3065
Query: 294 DNRM 305
R+
Sbjct: 3066 KIRV 3069
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 0.83
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 314 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 406
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 177 VLIFDLGGGTFDVSILTIEDGIFEVK 254
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 305 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 394
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)
Length = 1318
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -3
Query: 328 NSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 149
N+ +L +L P KW P D +S P V + + PP S + PF+S
Sbjct: 346 NALGYYLATKLQTEDPTKW-PPRYDDSSHFPHLWVVLSYDESTPPPRDGSAKPATQPFVS 404
Query: 148 RP 143
+P
Sbjct: 405 QP 406
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 183 IFDLGGGTFDVSILTIEDGIFEV 251
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 187 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 330
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 274 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 158
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 314 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 406
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 256 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 372
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = -3
Query: 646 AGASAPWGYEWSHPPVQYRGFEPYPSWHHGETSPTGSMVDLNRSAFSSSKRARVIDV*KS 467
A +APWG + ++ P++ F P H + T S VD + S F + A +DV S
Sbjct: 632 AAMAAPWGQQPANAPLE---FPPSSEEEHDGLAATESGVDAS-SGFWDEESADELDVDAS 687
Query: 466 IPSKRESISMLA 431
S + S A
Sbjct: 688 SSSSQNPFSQQA 699
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -2
Query: 260 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 93
G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344
Query: 92 ---ARDGTC 75
AR TC
Sbjct: 345 VYNARISTC 353
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = -3
Query: 319 TKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP* 140
+ W+ KS K P +S + SS TSK PP + +ST SP
Sbjct: 1244 SSWMVTNCQKSC--KRCPPEPPTSSIMQSSSNIPTTSKTPPSSTCLSTAVSPAAGADSNN 1301
Query: 139 AIAAAVGSLMIRRTF 95
A+ A+ SL++ F
Sbjct: 1302 AVNVAISSLVLPSLF 1316
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 583 QIHDIVLVGGSTRIPKVQKLLQDFF 657
+I + +VGGSTRIP ++ ++++ F
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF 30
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 190 TSAAVPSTCPSLPSRMVSSR*NPPPATP 273
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 314 LCPGVQEEIQKGPRYQQESS*AFAYCM 394
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 314 LCPGVQEEIQKGPRYQQESS*AFAYCM 394
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -3
Query: 313 WLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP 143
+ +L P KW D T I +V PPPR + + +PF+S+P
Sbjct: 558 YFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRDGTAKL-ATLPFVSQP 613
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +3
Query: 300 RMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYT 479
+ +N + +++K A R + +A T+SS + +I L E + YT
Sbjct: 198 QFINSTNSKTLEEHQKTRADLARLWAHSQELWNQANETVSSISTVKEKITQLDEKLSEYT 257
Query: 480 SITRARFEELNADL 521
+ T R +++ AD+
Sbjct: 258 NRTMERIDQIKADM 271
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTG 167
+ NA +T+P YF + +K G G+ + +++ I+Y LD+K TG
Sbjct: 1020 IYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--AMSKERNQEISYKLDRKWTG 1070
>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
Length = 312
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 208 STCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPTREL 372
S CPSLP+ S TP + TI T + SS T TS PT ++
Sbjct: 46 SLCPSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSS---TSSTSKPTEDV 97
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 185 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 99
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_23904| Best HMM Match : RdRP (HMM E-Value=0)
Length = 1511
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +2
Query: 488 SCSLRGAERRSVQVYHGASGRSLSVMPR 571
SC +RGAER++ ++ +G +++ P+
Sbjct: 1028 SCLIRGAERKTAKMLQQKTGAKITIRPK 1055
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,724,661
Number of Sequences: 59808
Number of extensions: 491570
Number of successful extensions: 1819
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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