BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0923 (660 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 326 1e-89 SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 318 2e-87 SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 315 2e-86 SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 253 8e-68 SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 153 1e-37 SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32 SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26 SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23 SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 85 4e-17 SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 71 6e-13 SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 49 4e-06 SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051 SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21 SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83 SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.1 SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9 SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) 30 1.9 SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 1.9 SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 2.5 SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 2.5 SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 2.5 SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 2.5 SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4 SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 5.9 SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 5.9 SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 28 7.7 SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7 SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 28 7.7 SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 28 7.7 SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.7 SB_23904| Best HMM Match : RdRP (HMM E-Value=0) 28 7.7 >SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1097 Score = 326 bits (801), Expect = 1e-89 Identities = 156/179 (87%), Positives = 170/179 (94%) Frame = +3 Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188 V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+ Sbjct: 139 VTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIY 198 Query: 189 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 368 DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+ NKR Sbjct: 199 DLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPNKR 258 Query: 369 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 545 A+RRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELN DLF+ T EPV Sbjct: 259 AMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPV 317 Score = 54.4 bits (125), Expect = 8e-08 Identities = 25/39 (64%), Positives = 33/39 (84%), Gaps = 2/39 (5%) Frame = +1 Query: 547 EKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFF 657 E+++RD+K+ K IHDIVLVGGSTRIPK+QK+LQ+ F Sbjct: 318 EQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELF 356 >SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 746 Score = 318 bits (782), Expect = 2e-87 Identities = 153/179 (85%), Positives = 167/179 (93%) Frame = +3 Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188 V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIF Sbjct: 232 VTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIF 291 Query: 189 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 368 DLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD+ NKR Sbjct: 292 DLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITPNKR 351 Query: 369 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 545 ALRRLRTACERAKRTLSSSTQASIEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPV Sbjct: 352 ALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPV 410 Score = 54.8 bits (126), Expect = 6e-08 Identities = 24/39 (61%), Positives = 35/39 (89%), Gaps = 1/39 (2%) Frame = +1 Query: 547 EKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFN 660 EK+++D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFN Sbjct: 411 EKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFN 449 Score = 48.0 bits (109), Expect = 7e-06 Identities = 21/24 (87%), Positives = 23/24 (95%) Frame = +3 Query: 9 VQNAVITVPAYFNDSQRQATKDAG 80 V +AV+TVPAYFNDSQRQATKDAG Sbjct: 164 VTDAVVTVPAYFNDSQRQATKDAG 187 >SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) Length = 640 Score = 315 bits (774), Expect = 2e-86 Identities = 150/182 (82%), Positives = 170/182 (93%), Gaps = 1/182 (0%) Frame = +3 Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188 V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIF Sbjct: 139 VTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIF 198 Query: 189 DLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNK 365 DLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD++ N Sbjct: 199 DLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNS 258 Query: 366 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 545 RA+RRLRTACERAKRTLSSST+ASIE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV Sbjct: 259 RAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPV 318 Query: 546 GE 551 + Sbjct: 319 NK 320 Score = 57.6 bits (133), Expect = 8e-09 Identities = 22/37 (59%), Positives = 33/37 (89%) Frame = +1 Query: 550 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660 K+L DAK K+ IH++VLVGGSTR+PK+QK+L+++F+ Sbjct: 320 KALSDAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFS 356 >SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1327 Score = 253 bits (620), Expect = 8e-68 Identities = 118/184 (64%), Positives = 153/184 (83%) Frame = +3 Query: 3 KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 182 K V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L Sbjct: 835 KKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNIL 893 Query: 183 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 362 +FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K++ + Sbjct: 894 VFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRKD 953 Query: 363 KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEP 542 RA+++LR E+AKR LS+ QA +EI+S FEG DF +TRARFEELNA LF+ST++P Sbjct: 954 NRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKP 1013 Query: 543 VGEV 554 V +V Sbjct: 1014 VQKV 1017 Score = 57.6 bits (133), Expect = 8e-09 Identities = 25/37 (67%), Positives = 33/37 (89%) Frame = +1 Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657 +K L DA + K++IH+IVLVGGSTRIPKVQ+L++DFF Sbjct: 1015 QKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFF 1051 >SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) Length = 437 Score = 153 bits (371), Expect = 1e-37 Identities = 81/188 (43%), Positives = 122/188 (64%), Gaps = 5/188 (2%) Frame = +3 Query: 6 TVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLI 185 TV AV++VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ Sbjct: 168 TVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMV 226 Query: 186 FDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNK 365 DLGGGT DVS+L I+ G+F + AG+ LGG+DF+ R + + +Q +++ + L T Sbjct: 227 VDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQL-TCS 285 Query: 366 RALRRLRTACERAKRTLSSSTQASIE--IDSLFEG---IDFYTSITRARFEELNADLFRS 530 ++RLR E AK L+ + + +I+ + SL EG + F +I+R FE +N DLF+ Sbjct: 286 EDIQRLRQEVEAAKINLTRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKK 345 Query: 531 TMEPVGEV 554 ++P+ V Sbjct: 346 VLQPIRRV 353 Score = 46.0 bits (104), Expect = 3e-05 Identities = 16/35 (45%), Positives = 30/35 (85%) Frame = +1 Query: 556 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 660 L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+ Sbjct: 354 LAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFD 388 >SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1068 Score = 136 bits (329), Expect = 1e-32 Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 4/183 (2%) Frame = +3 Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE---RNV 179 V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV Sbjct: 196 VTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNV 255 Query: 180 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLAT 359 + D+G + V I G +V STA + +LGG DFD +V HF QEFK KYK D+ + Sbjct: 256 VFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVHS 315 Query: 360 NKRALRRLRTACERAKRTLSSST-QASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 536 + +A +L CE+ K+ +S++T + I I+ E D + + RA+FEEL ADL + Sbjct: 316 SIKAKIKLGAECEKLKKLMSANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVE 375 Query: 537 EPV 545 P+ Sbjct: 376 APL 378 >SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 766 Score = 116 bits (280), Expect = 1e-26 Identities = 58/126 (46%), Positives = 82/126 (65%), Gaps = 4/126 (3%) Frame = +3 Query: 177 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 356 + ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+ Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61 Query: 357 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLF 524 + AL+RLR A E+AK LSSS Q I + + ++R++FE L ADL Sbjct: 62 KDSMALQRLREAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADLI 121 Query: 525 RSTMEP 542 T+ P Sbjct: 122 NRTVGP 127 Score = 48.8 bits (111), Expect = 4e-06 Identities = 20/37 (54%), Positives = 31/37 (83%) Frame = +1 Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657 +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F Sbjct: 129 KKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF 165 >SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1019 Score = 105 bits (252), Expect = 3e-23 Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 18/197 (9%) Frame = +3 Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERN 176 +++ V+TVP +FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ Sbjct: 105 IKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKH 164 Query: 177 VLIFDLGGGTFDVSIL------TIEDGIFE------VKSTAGDTHLGGEDFDNRMVNHFV 320 + +D+G + +I+ T + GI E +K D LGG D R+ +H V Sbjct: 165 FMFYDMGASSTVATIVGYSMTKTKDRGISETAPQLVIKGIGFDRTLGGHAIDMRLRDHLV 224 Query: 321 QEFKR--KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRA 494 Q FK+ K+K ++ + RA+ + R K+ LS++ + +I+ +F+G DF +TR Sbjct: 225 QLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFAQIEGVFDGKDFRVKVTRE 284 Query: 495 RFEELNADLFRSTMEPV 545 EE+ DLF PV Sbjct: 285 ELEEMCQDLFDRVAGPV 301 Score = 33.9 bits (74), Expect = 0.12 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +1 Query: 550 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 645 ++L+ A M I +VLVGG R+PKVQ L Sbjct: 303 RALKSASMTMNDIDSVVLVGGGIRVPKVQDAL 334 >SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) Length = 592 Score = 85.4 bits (202), Expect = 4e-17 Identities = 43/113 (38%), Positives = 72/113 (63%), Gaps = 5/113 (4%) Frame = +3 Query: 168 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR---- 335 + VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLL 212 Query: 336 -KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITR 491 K+K D TNKR+ +L+T+ E+ K LS+ A+ +DSL EGIDF ++R Sbjct: 213 WKWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQGQVSR 265 >SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) Length = 179 Score = 71.3 bits (167), Expect = 6e-13 Identities = 47/84 (55%), Positives = 53/84 (63%), Gaps = 26/84 (30%) Frame = +3 Query: 3 KTVQNAVITVPAYFNDSQRQATKDAGTISGLN------------------------VLRI 110 + V+ AVITVPA+FND+QRQATKDAGTI+GL+ VLRI Sbjct: 36 QAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRI 95 Query: 111 INEPTAAAIAYGLDKK--GTGERN 176 INEPTAAAIAYGLDK G ERN Sbjct: 96 INEPTAAAIAYGLDKARGGKAERN 119 >SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) Length = 212 Score = 48.8 bits (111), Expect = 4e-06 Identities = 20/37 (54%), Positives = 31/37 (83%) Frame = +1 Query: 547 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657 +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F Sbjct: 74 KKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF 110 >SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 168 Score = 35.1 bits (77), Expect = 0.051 Identities = 12/29 (41%), Positives = 24/29 (82%) Frame = +1 Query: 571 MDKAQIHDIVLVGGSTRIPKVQKLLQDFF 657 + ++ + ++LVGG+TR PK+Q+LL+++F Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYF 63 >SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3235 Score = 33.1 bits (72), Expect = 0.21 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = +3 Query: 126 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 293 A A L +G E + D G GT VS + +E+G +++ D H+ G F Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560 Score = 31.1 bits (67), Expect = 0.83 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +3 Query: 174 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 293 + LI D G+F VS E+GI ++ GD H+ G F Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467 Score = 28.7 bits (61), Expect = 4.4 Identities = 19/64 (29%), Positives = 27/64 (42%) Frame = +3 Query: 114 NEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 293 N P A + GT E +I DLG G + + + E G V +TH+ G F Sbjct: 3007 NAPVGKVSATVIAPSGT-ESKAVISDLGKGNYAIRFVPKEFGDHLVNVKFDETHIPGSPF 3065 Query: 294 DNRM 305 R+ Sbjct: 3066 KIRV 3069 >SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 956 Score = 31.1 bits (67), Expect = 0.83 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 Query: 314 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 406 LCP ++ + GP +++E AFA C+ GK Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199 >SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) Length = 634 Score = 30.7 bits (66), Expect = 1.1 Identities = 11/26 (42%), Positives = 20/26 (76%) Frame = +3 Query: 177 VLIFDLGGGTFDVSILTIEDGIFEVK 254 V I+DLG GT++++IL E G++ ++ Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344 >SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 382 Score = 29.9 bits (64), Expect = 1.9 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +2 Query: 305 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 394 G LCP ++ + GP +++E S AFA C+ Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247 >SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) Length = 1318 Score = 29.9 bits (64), Expect = 1.9 Identities = 18/62 (29%), Positives = 27/62 (43%) Frame = -3 Query: 328 NSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 149 N+ +L +L P KW P D +S P V + + PP S + PF+S Sbjct: 346 NALGYYLATKLQTEDPTKW-PPRYDDSSHFPHLWVVLSYDESTPPPRDGSAKPATQPFVS 404 Query: 148 RP 143 +P Sbjct: 405 QP 406 >SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) Length = 600 Score = 29.9 bits (64), Expect = 1.9 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = +3 Query: 183 IFDLGGGTFDVSILTIEDGIFEV 251 +FDLG G+++V L +E G++ V Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333 >SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) Length = 774 Score = 29.5 bits (63), Expect = 2.5 Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Frame = +1 Query: 187 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 330 L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+ Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141 >SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) Length = 799 Score = 29.5 bits (63), Expect = 2.5 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -3 Query: 274 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 158 +++PA+ S +PS V +D VP P I+ + VP Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305 >SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) Length = 452 Score = 29.5 bits (63), Expect = 2.5 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +2 Query: 314 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 406 LCP ++ GP +++E S AFA C+ GK Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236 >SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) Length = 647 Score = 29.5 bits (63), Expect = 2.5 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = +1 Query: 256 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 372 PPPA T E L T +W+ T S + R KRT LPT L Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474 >SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 886 Score = 29.5 bits (63), Expect = 2.5 Identities = 22/72 (30%), Positives = 33/72 (45%) Frame = -3 Query: 646 AGASAPWGYEWSHPPVQYRGFEPYPSWHHGETSPTGSMVDLNRSAFSSSKRARVIDV*KS 467 A +APWG + ++ P++ F P H + T S VD + S F + A +DV S Sbjct: 632 AAMAAPWGQQPANAPLE---FPPSSEEEHDGLAATESGVDAS-SGFWDEESADELDVDAS 687 Query: 466 IPSKRESISMLA 431 S + S A Sbjct: 688 SSSSQNPFSQQA 699 >SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1324 Score = 29.1 bits (62), Expect = 3.4 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%) Frame = -2 Query: 260 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 93 G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344 Query: 92 ---ARDGTC 75 AR TC Sbjct: 345 VYNARISTC 353 Score = 29.1 bits (62), Expect = 3.4 Identities = 22/75 (29%), Positives = 32/75 (42%) Frame = -3 Query: 319 TKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP* 140 + W+ KS K P +S + SS TSK PP + +ST SP Sbjct: 1244 SSWMVTNCQKSC--KRCPPEPPTSSIMQSSSNIPTTSKTPPSSTCLSTAVSPAAGADSNN 1301 Query: 139 AIAAAVGSLMIRRTF 95 A+ A+ SL++ F Sbjct: 1302 AVNVAISSLVLPSLF 1316 >SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 87 Score = 29.1 bits (62), Expect = 3.4 Identities = 10/25 (40%), Positives = 19/25 (76%) Frame = +1 Query: 583 QIHDIVLVGGSTRIPKVQKLLQDFF 657 +I + +VGGSTRIP ++ ++++ F Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF 30 >SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 833 Score = 28.7 bits (61), Expect = 4.4 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +1 Query: 190 TSAAVPSTCPSLPSRMVSSR*NPPPATP 273 T A P P++PSR +R PPP P Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811 >SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) Length = 439 Score = 28.3 bits (60), Expect = 5.9 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 314 LCPGVQEEIQKGPRYQQESS*AFAYCM 394 LCP ++ + GP +++E S AFA C+ Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133 >SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) Length = 533 Score = 28.3 bits (60), Expect = 5.9 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 314 LCPGVQEEIQKGPRYQQESS*AFAYCM 394 LCP ++ + GP +++E S AFA C+ Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100 >SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) Length = 1557 Score = 27.9 bits (59), Expect = 7.7 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = -3 Query: 313 WLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP 143 + +L P KW D T I +V PPPR + + +PF+S+P Sbjct: 558 YFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRDGTAKL-ATLPFVSQP 613 >SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 557 Score = 27.9 bits (59), Expect = 7.7 Identities = 17/74 (22%), Positives = 34/74 (45%) Frame = +3 Query: 300 RMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYT 479 + +N + +++K A R + +A T+SS + +I L E + YT Sbjct: 198 QFINSTNSKTLEEHQKTRADLARLWAHSQELWNQANETVSSISTVKEKITQLDEKLSEYT 257 Query: 480 SITRARFEELNADL 521 + T R +++ AD+ Sbjct: 258 NRTMERIDQIKADM 271 >SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) Length = 1080 Score = 27.9 bits (59), Expect = 7.7 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = +3 Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTG 167 + NA +T+P YF + +K G G+ + +++ I+Y LD+K TG Sbjct: 1020 IYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--AMSKERNQEISYKLDRKWTG 1070 >SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) Length = 312 Score = 27.9 bits (59), Expect = 7.7 Identities = 19/55 (34%), Positives = 24/55 (43%) Frame = +1 Query: 208 STCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPTREL 372 S CPSLP+ S TP + TI T + SS T TS PT ++ Sbjct: 46 SLCPSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSS---TSSTSKPTEDV 97 >SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) Length = 1774 Score = 27.9 bits (59), Expect = 7.7 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -2 Query: 185 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 99 +K ISF +LF+ VSN S+ R+I +E+ Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780 >SB_23904| Best HMM Match : RdRP (HMM E-Value=0) Length = 1511 Score = 27.9 bits (59), Expect = 7.7 Identities = 9/28 (32%), Positives = 19/28 (67%) Frame = +2 Query: 488 SCSLRGAERRSVQVYHGASGRSLSVMPR 571 SC +RGAER++ ++ +G +++ P+ Sbjct: 1028 SCLIRGAERKTAKMLQQKTGAKITIRPK 1055 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,724,661 Number of Sequences: 59808 Number of extensions: 491570 Number of successful extensions: 1819 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 1615 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1805 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1693527500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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