BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0922 (706 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 40 0.003 04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 38 0.010 07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 33 0.17 11_04_0401 - 17251759-17252208,17252545-17253022,17254235-172542... 33 0.22 11_04_0144 + 14044973-14044984,14045050-14045183,14045329-140458... 31 0.89 07_03_1783 + 29480987-29481165,29481526-29481685,29481767-294818... 31 1.2 11_06_0563 - 25018219-25018658,25020381-25020459 30 2.1 06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 30 2.1 03_03_0164 - 14979364-14979479,14979613-14980102 30 2.1 06_01_0243 - 1837830-1837886,1837969-1838016,1838113-1838255,183... 29 4.8 03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733,525... 29 4.8 07_01_0693 - 5242932-5243213,5245544-5245695,5246267-5246291 28 6.3 11_05_0079 + 18914668-18914753,18915123-18915338,18915829-189158... 28 8.3 08_01_0418 - 3716226-3716279,3716531-3716581,3716656-3716751,371... 28 8.3 07_03_1471 + 26751684-26752307 28 8.3 04_04_0555 - 26210346-26211458,26211530-26211719,26211826-262119... 28 8.3 >02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607, 6592635-6592794,6592992-6593158,6593246-6593869 Length = 883 Score = 39.5 bits (88), Expect = 0.003 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Frame = +1 Query: 244 PITTDEVRDAIHNLQPRKAPGSDG--IHN--RALKFLPVQLIAMLATILNAAMTH 396 P + DE++DA+ + P KAPG DG +HN KF P+ L +L I + + + Sbjct: 152 PYSDDEIKDALFQMGPTKAPGPDGRKVHNPEHLSKFRPISLCNVLYKIASKVLAN 206 >04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035, 17532062-17533525 Length = 1626 Score = 37.5 bits (83), Expect = 0.010 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 2/128 (1%) Frame = +1 Query: 166 ADPE-HTELVDREVERRASLPPSDAL-PPITTDEVRDAIHNLQPRKAPGSDGIHNRALKF 339 ADP + E V R + + + ++ L +E+ AI + P K+PG DG R + Sbjct: 862 ADPSLNPESVTRLFQEKVTDAMNEKLCQEFKEEEIAQAIFQIGPLKSPGPDGFPARFYQR 921 Query: 340 LPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIY 519 L + + + + P + ++ I K +P + YRPISL + + K+ Sbjct: 922 NWGTLKSDIILAVRNFFQSGLMPEGVNDTAIVLIPKKDQPI-DLKDYRPISLCNVVYKVV 980 Query: 520 ERLLRKRL 543 + L RL Sbjct: 981 SKCLVNRL 988 >07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412, 1778770-1778900,1779530-1779788,1779823-1780098, 1780100-1781352 Length = 1344 Score = 33.5 bits (73), Expect = 0.17 Identities = 29/82 (35%), Positives = 39/82 (47%) Frame = +1 Query: 424 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSK 603 A ++ I KPGK N YRPISL + KI ++L RL V I +D Q GF K Sbjct: 971 AYIVLIQKPGKE-NTVDGYRPISLQNCSVKILSKVLATRL-QRVFLRMIHLD-QTGF-LK 1026 Query: 604 HSCVQQVHRLTEHILIGLNRRK 669 C+ + ++ RRK Sbjct: 1027 GRCISENLIYATELIQACYRRK 1048 >11_04_0401 - 17251759-17252208,17252545-17253022,17254235-17254290, 17254489-17255019 Length = 504 Score = 33.1 bits (72), Expect = 0.22 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 6/132 (4%) Frame = +1 Query: 166 ADPE-HTELVDREVERRASLPPSDAL-PPITTDEVRDAIHNLQPRKAPGSDG----IHNR 327 ADP E V R ++++ + +D L I +E+ AI + P K+ G +G I+ R Sbjct: 359 ADPSLDPECVTRLIQKKVTAAMNDKLCEDIKEEEIALAIFQIGPLKSLGPNGFPARIYQR 418 Query: 328 ALKFLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTI 507 + ++ + I +T P + ++ I +P + +RPISL + + Sbjct: 419 NRGIMKQDIVNPVTKIFQTGLT----PMGVNDTAIVLILMSDQPV-DLKDFRPISLCNVV 473 Query: 508 GKIYERLLRKRL 543 K+ + L RL Sbjct: 474 YKVVFKCLVNRL 485 >11_04_0144 + 14044973-14044984,14045050-14045183,14045329-14045824, 14046097-14046117,14047504-14047767,14048635-14048715 Length = 335 Score = 31.1 bits (67), Expect = 0.89 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Frame = +1 Query: 253 TDEVRDAIHNLQPRKAPGSDGIHNRAL-KFLPV--QLIAMLATILNAAMTHCIFPAVWKE 423 T EV + I +QP KAP DGI+ L K P+ Q LA +A T + P + Sbjct: 224 TQEVDNLIKVIQPDKAPSPDGINGYFLKKCWPIISQEFYWLAAHFHACYTD-LQPI--NK 280 Query: 424 ADVIGIHKPGKPTNETSSYRPISLL 498 + + + K P + YRPISL+ Sbjct: 281 SFITLVPKKSSP-ETVNDYRPISLM 304 >07_03_1783 + 29480987-29481165,29481526-29481685,29481767-29481862, 29481948-29482062,29482175-29482337,29482536-29482707, 29483924-29484013,29484137-29484598,29484675-29485268, 29485486-29485554,29485810-29485902,29486432-29486677, 29487277-29487417,29487748-29487828,29487911-29487973, 29488059-29488166,29488303-29488383,29488474-29488521, 29488979-29489053,29489973-29490068,29490156-29490236, 29490295-29490402,29490989-29491033,29491119-29491202, 29491379-29491482,29491581-29491728 Length = 1233 Score = 30.7 bits (66), Expect = 1.2 Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 2/127 (1%) Frame = +1 Query: 163 HADPEHTELVDREVERRASLPPSDALPPITTDEVRDAIHNLQPRKAPGSDGIHNR-ALKF 339 H D EHTE V VE ++ PS +T + A + G +L+ Sbjct: 360 HHDQEHTENVKNNVELTSADTPSSPSNSASTGNSEAVYQLVSMFAALAAQGDRAAGSLQI 419 Query: 340 LPVQLIA-MLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKI 516 L + A +LA ++ M H P E D G+P+ SS SLLS + Sbjct: 420 LSSSIAADLLAEVVMVNMQH--LPVSHPEVDQQQSPSAGQPSGAPSS----SLLSACFPL 473 Query: 517 YERLLRK 537 E LL++ Sbjct: 474 LESLLKR 480 >11_06_0563 - 25018219-25018658,25020381-25020459 Length = 172 Score = 29.9 bits (64), Expect = 2.1 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +3 Query: 162 TRGPRTHRVSRQGGRAQSLPAALGRVTPHYHGRS*RRD 275 + GPR R+ ++ ++ PAA G V P Y +S RR+ Sbjct: 113 SNGPRPTRIRQRRASSRPDPAAAGLVPPGYGAKSGRRE 150 >06_02_0297 - 13891954-13892556,13893019-13893855,13894179-13894394, 13895455-13895874,13896198-13896506 Length = 794 Score = 29.9 bits (64), Expect = 2.1 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = +1 Query: 448 PGKPTNET-SSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGF 594 P K + ET + +RPISL+ KI +LL RL + K++ D +GF Sbjct: 377 PKKTSLETVNDFRPISLMGISLKIVTKLLAGRLQGVIL--KLVSDNHYGF 424 >03_03_0164 - 14979364-14979479,14979613-14980102 Length = 201 Score = 29.9 bits (64), Expect = 2.1 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 2/74 (2%) Frame = +3 Query: 156 HSTRG--PRTHRVSRQGGRAQSLPAALGRVTPHYHGRS*RRDPQPPT*EGTRLRRHPQPR 329 H+ RG P R ++GG + AA P GR RR PP LR P PR Sbjct: 105 HTQRGSPPLPPRSGQRGGEEGEVAAA----APGGGGRRWRRRRPPPPTAAAPLRSSPNPR 160 Query: 330 AKIFASPTDSNVGY 371 + D +GY Sbjct: 161 SARAYLCADDELGY 174 >06_01_0243 - 1837830-1837886,1837969-1838016,1838113-1838255, 1838784-1838982,1839085-1839265,1839857-1840228, 1841453-1841658 Length = 401 Score = 28.7 bits (61), Expect = 4.8 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +3 Query: 159 STRGPRTHRVSRQGGRAQSLPAALGRVTPHYHGRS*RRDPQPP 287 ++RG S G SL LG + HYH + RDP PP Sbjct: 22 NSRGYFALGYSLPGEPFPSLHELLGAIYDHYHPQRESRDPAPP 64 >03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733, 5256811-5256892,5257790-5257827 Length = 184 Score = 28.7 bits (61), Expect = 4.8 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Frame = -2 Query: 564 VRGNKI--PEAFPKEPFVDFSYRREETNRTV 478 V GNKI PEAFPK+ F D + T+R V Sbjct: 126 VIGNKIDKPEAFPKQSFTDVMGLKTITDREV 156 >07_01_0693 - 5242932-5243213,5245544-5245695,5246267-5246291 Length = 152 Score = 28.3 bits (60), Expect = 6.3 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%) Frame = -1 Query: 211 CARPPCRLT-RCVRGPRVECWWCIALAVHRPAAQPCHRRRMP 89 C+ PC RC G +E WC V A C R P Sbjct: 66 CSAQPCNCVGRCCNGSTLEHPWCGLKPVRDKAIDDCFRTATP 107 >11_05_0079 + 18914668-18914753,18915123-18915338,18915829-18915895, 18916656-18916723,18916999-18917125,18918240-18918339, 18918405-18918433,18918678-18918730,18919246-18919732 Length = 410 Score = 27.9 bits (59), Expect = 8.3 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -3 Query: 470 VSFVGLPGLCIPITSASFHTAGKMQCVIAAFKIVANIAISWTGKNFSARLWMPSE 306 VS V L G + T+ S + + I+++I ISW K +S+ L +P E Sbjct: 327 VSIVSLAGAAVASTTGS-EKSRIYSYLFPVLGIMSSILISWRIKQYSSALVIPEE 380 >08_01_0418 - 3716226-3716279,3716531-3716581,3716656-3716751, 3717037-3717194,3717303-3717417,3717511-3717564, 3717843-3717950,3718494-3718583,3718818-3718856, 3718993-3719172,3719264-3719576,3719659-3719834 Length = 477 Score = 27.9 bits (59), Expect = 8.3 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Frame = +1 Query: 235 ALPPITTDEVRDAIH--NLQPRKAPGSDGIHNRALKFLPVQLIAMLATILN 381 + PP+T +++ +A+H L P ++ I N LP + LAT+++ Sbjct: 6 SFPPLTPEQIAEALHTYGLAPTANLRAEDIANPQPDLLPAVISNFLATVVD 56 >07_03_1471 + 26751684-26752307 Length = 207 Score = 27.9 bits (59), Expect = 8.3 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -3 Query: 311 SEPGAFLGWRLWIASLTSSVVMGGNASEGGREALRS 204 S P + + SLTS+ V G S GGR +RS Sbjct: 5 SNPSLIVAAIFLVISLTSATVANGGRSGGGRRLVRS 40 >04_04_0555 - 26210346-26211458,26211530-26211719,26211826-26211960, 26212072-26212169,26212262-26212425,26213558-26214032 Length = 724 Score = 27.9 bits (59), Expect = 8.3 Identities = 13/50 (26%), Positives = 23/50 (46%) Frame = +1 Query: 361 MLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIG 510 ++ T + + C+F +K D IGI P + +R I++L G Sbjct: 545 VIGTAMGCVIAPCVFWLFYKAFDNIGISGSDYPAPNAAVFRSIAILGVDG 594 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,423,052 Number of Sequences: 37544 Number of extensions: 460350 Number of successful extensions: 1407 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1356 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1406 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1815633512 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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