Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0922
(706 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 148 8e-36
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 124 1e-28
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 124 1e-28
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 122 4e-28
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 121 8e-28
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 121 8e-28
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 121 8e-28
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 121 8e-28
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 121 8e-28
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 120 1e-27
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 118 8e-27
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 109 4e-24
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 108 6e-24
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 108 6e-24
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 108 6e-24
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 105 4e-23
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 105 4e-23
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 99 5e-21
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 99 5e-21
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 97 2e-20
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 87 3e-17
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 79 4e-15
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 74 2e-13
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 66 3e-11
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 61 2e-09
BT003320-1|AAO25080.1| 798|Drosophila melanogaster AT11823p pro... 30 3.5
AY069327-1|AAL39472.2| 552|Drosophila melanogaster LD04591p pro... 30 3.5
AE014297-4076|AAF56673.2| 980|Drosophila melanogaster CG6051-PA... 30 3.5
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB... 30 3.5
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P... 30 3.5
BT001724-1|AAN71479.1| 568|Drosophila melanogaster RE69557p pro... 29 6.2
AE014296-3637|AAF51793.2| 568|Drosophila melanogaster CG7442-PA... 29 6.2
AY058796-1|AAL14025.1| 570|Drosophila melanogaster SD10848p pro... 29 8.1
AJ271817-4|CAB72252.1| 791|Drosophila melanogaster heavy metal-... 29 8.1
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 148 bits (358), Expect = 8e-36
Identities = 80/177 (45%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Frame = +1
Query: 175 EHTELVDR-EVERRASLPPSDALPPITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQ 351
++ E +D E + SLP + PI +E+ +AI +L +K+PG D + N LK LPV+
Sbjct: 416 QYQETLDSLETPLQMSLP----IKPIRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVR 471
Query: 352 LIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLL 531
I LA I NA + FP WK A ++ IHKPGKP SYRPISLLS++ K++ERL+
Sbjct: 472 AILYLALIYNAILRVQFFPKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLI 531
Query: 532 RKRLWDFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDI 702
RL D +T +IL D QFGFR HS V+QVHRLT+HIL + ++ A+F D+
Sbjct: 532 ANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKEY--CNAVFIDM 586
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 124 bits (299), Expect = 1e-28
Identities = 69/154 (44%), Positives = 89/154 (57%)
Frame = +1
Query: 244 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKE 423
PIT E+ D I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKH 539
Query: 424 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSK 603
A V I KPGK NE SYRPISLLS + KI+ERLL KRL+ K + QFGFR +
Sbjct: 540 AQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKE 599
Query: 604 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIA 705
H QQ+ R+T+ IL R++ A+F DI+
Sbjct: 600 HGSEQQIARVTQFILEAFERKEY--CSAVFLDIS 631
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 124 bits (299), Expect = 1e-28
Identities = 70/175 (40%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Frame = +1
Query: 184 ELVDREVERRASLPPSDALPP--ITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLI 357
E + R+VE P +LPP +T +EV++ I L +KAPG D + NR ++ LP Q +
Sbjct: 217 ESLCRQVEEYLESPFQMSLPPSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQAL 276
Query: 358 AMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRK 537
L I N+ + FP WK A +I IHK GK + SYRPISLL ++GKI ERL+
Sbjct: 277 QFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLILN 336
Query: 538 RLWDFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDI 702
RL K + QFGFR +H +Q+HR+ L + K+ GA F DI
Sbjct: 337 RLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAM-ENKEYAVGA-FLDI 389
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 122 bits (295), Expect = 4e-28
Identities = 67/154 (43%), Positives = 91/154 (59%)
Frame = +1
Query: 244 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKE 423
PIT +E+ + I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 492 PITLNELNEEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKH 551
Query: 424 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSK 603
A V I KPGK +NE SYRPISLLS + K++ERLL KRL+ K + QFGFR +
Sbjct: 552 AQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKE 611
Query: 604 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIA 705
H QQ+ R+T+ IL R++ A+F DI+
Sbjct: 612 HGTEQQIARVTQFILEAFERKEY--CSAVFLDIS 643
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 121 bits (292), Expect = 8e-28
Identities = 67/154 (43%), Positives = 89/154 (57%)
Frame = +1
Query: 244 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKE 423
PIT E+ D I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 364 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 423
Query: 424 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSK 603
A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K + QFGFR +
Sbjct: 424 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKE 483
Query: 604 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIA 705
H QQ+ R+T+ IL R++ A+F DI+
Sbjct: 484 HGTEQQIARVTQFILEAFERKEY--CSAVFLDIS 515
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 121 bits (292), Expect = 8e-28
Identities = 67/154 (43%), Positives = 89/154 (57%)
Frame = +1
Query: 244 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKE 423
PIT E+ D I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 539
Query: 424 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSK 603
A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K + QFGFR +
Sbjct: 540 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKE 599
Query: 604 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIA 705
H QQ+ R+T+ IL R++ A+F DI+
Sbjct: 600 HGTEQQIARVTQFILEAFERKEY--CSAVFLDIS 631
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 121 bits (292), Expect = 8e-28
Identities = 67/154 (43%), Positives = 89/154 (57%)
Frame = +1
Query: 244 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKE 423
PIT E+ D I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKH 539
Query: 424 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSK 603
A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K + QFGFR +
Sbjct: 540 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKE 599
Query: 604 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIA 705
H QQ+ R+T+ IL R++ A+F DI+
Sbjct: 600 HGTEQQIARVTQFILEAFERKEY--CSAVFLDIS 631
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 121 bits (292), Expect = 8e-28
Identities = 67/154 (43%), Positives = 89/154 (57%)
Frame = +1
Query: 244 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKE 423
PIT E+ D I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 442 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 501
Query: 424 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSK 603
A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K + QFGFR +
Sbjct: 502 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKE 561
Query: 604 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIA 705
H QQ+ R+T+ IL R++ A+F DI+
Sbjct: 562 HGTEQQIARVTQFILEAFERKEY--CSAVFLDIS 593
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 121 bits (292), Expect = 8e-28
Identities = 67/154 (43%), Positives = 89/154 (57%)
Frame = +1
Query: 244 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKE 423
PIT E+ D I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 539
Query: 424 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSK 603
A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K + QFGFR +
Sbjct: 540 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKE 599
Query: 604 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIA 705
H QQ+ R+T+ IL R++ A+F DI+
Sbjct: 600 HGTEQQIARVTQFILEAFERKEY--CSAVFLDIS 631
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 120 bits (290), Expect = 1e-27
Identities = 69/175 (39%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Frame = +1
Query: 184 ELVDREVERRASLPPSDALP--PITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLI 357
E + R+VE P +LP +T +EV++ I L +KAPG D + NR ++ LP Q +
Sbjct: 415 ESLCRQVEEYLESPFQMSLPLSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQAL 474
Query: 358 AMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRK 537
LA I N+ + FP WK A +I IHK GK + SYRP SLL ++GKI ERL+
Sbjct: 475 QFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLILN 534
Query: 538 RLWDFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDI 702
RL K + QFGFR +H +Q+HR+ L + K+ GA F DI
Sbjct: 535 RLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAM-ENKEYAVGA-FLDI 587
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 118 bits (284), Expect = 8e-27
Identities = 64/155 (41%), Positives = 86/155 (55%)
Frame = +1
Query: 238 LPPITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVW 417
+ P EV + I KAPG D I N LK LP Q I + + NA + FP W
Sbjct: 433 ITPFEPCEVAEVIVRQSNNKAPGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPYQW 492
Query: 418 KEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFR 597
K + IHKPGKP E +SYRPISLL +I K++ERL+ R+ + A I + QFGFR
Sbjct: 493 KLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFR 552
Query: 598 SKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDI 702
+ H V+Q+HR+ E IL + ++ +LF DI
Sbjct: 553 AGHCTVEQLHRVVEQILTAYDSKEY--CNSLFLDI 585
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 109 bits (262), Expect = 4e-24
Identities = 67/188 (35%), Positives = 98/188 (52%), Gaps = 5/188 (2%)
Frame = +1
Query: 154 STQHADPEHTELVDREVERRASLPPSDA-----LPPITTDEVRDAIHNLQPRKAPGSDGI 318
+ Q D + E V E+++ SL S P+T E+ I++L+ +KAPG+D +
Sbjct: 1 TNQINDAKDREFVRNELDKFKSLNASGESGNSNFKPVTLAELNGLINSLELKKAPGTDNL 60
Query: 319 HNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLL 498
+N+ + LP + L I N + FP WK A + I KPGK +SYRPISLL
Sbjct: 61 NNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLL 120
Query: 499 STIGKIYERLLRKRLWDFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIP 678
S + K+ ER+L KRL+D + K + QFGFR H Q+ R+T+ IL + +
Sbjct: 121 SGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--V 178
Query: 679 TGALFFDI 702
A F DI
Sbjct: 179 CSATFLDI 186
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 108 bits (260), Expect = 6e-24
Identities = 67/188 (35%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Frame = +1
Query: 154 STQHADPEHTELVDREVERRASLPPSDA-----LPPITTDEVRDAIHNLQPRKAPGSDGI 318
+ Q D + E V E+ + SL S P+T E+ I++L+ +KAPG+D +
Sbjct: 448 TNQINDAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELNGLINSLELKKAPGTDNL 507
Query: 319 HNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLL 498
+N+ + LP + L I N + FP WK A + I KPGK +SYRPISLL
Sbjct: 508 NNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLL 567
Query: 499 STIGKIYERLLRKRLWDFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIP 678
S + K+ ER+L KRL+D + K + QFGFR H Q+ R+T+ IL + +
Sbjct: 568 SGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--V 625
Query: 679 TGALFFDI 702
A F DI
Sbjct: 626 CSATFLDI 633
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 108 bits (260), Expect = 6e-24
Identities = 67/188 (35%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Frame = +1
Query: 154 STQHADPEHTELVDREVERRASLPPSDA-----LPPITTDEVRDAIHNLQPRKAPGSDGI 318
+ Q D + E V E+ + SL S P+T E+ I++L+ +KAPG+D +
Sbjct: 448 TNQINDAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELNGLINSLELKKAPGTDNL 507
Query: 319 HNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLL 498
+N+ + LP + L I N + FP WK A + I KPGK +SYRPISLL
Sbjct: 508 NNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLL 567
Query: 499 STIGKIYERLLRKRLWDFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIP 678
S + K+ ER+L KRL+D + K + QFGFR H Q+ R+T+ IL + +
Sbjct: 568 SGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--V 625
Query: 679 TGALFFDI 702
A F DI
Sbjct: 626 CSATFLDI 633
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 108 bits (260), Expect = 6e-24
Identities = 67/188 (35%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Frame = +1
Query: 154 STQHADPEHTELVDREVERRASLPPSDA-----LPPITTDEVRDAIHNLQPRKAPGSDGI 318
+ Q D + E V E+ + SL S P+T E+ I++L+ +KAPG+D +
Sbjct: 448 TNQINDAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELNGLINSLELKKAPGTDNL 507
Query: 319 HNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLL 498
+N+ + LP + L I N + FP WK A + I KPGK +SYRPISLL
Sbjct: 508 NNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLL 567
Query: 499 STIGKIYERLLRKRLWDFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIP 678
S + K+ ER+L KRL+D + K + QFGFR H Q+ R+T+ IL + +
Sbjct: 568 SGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--V 625
Query: 679 TGALFFDI 702
A F DI
Sbjct: 626 CSATFLDI 633
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 105 bits (253), Expect = 4e-23
Identities = 56/141 (39%), Positives = 79/141 (56%)
Frame = +1
Query: 283 LQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPT 462
L PRK+PG D I R L LP I + + NA FP WK++ ++ I KPGK
Sbjct: 444 LNPRKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDK 503
Query: 463 NETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSKHSCVQQVHRLTEH 642
+ SSYRPISLL+ + K++E++L R+ + N L QFGFR KH ++QV+R+T
Sbjct: 504 TQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSE 563
Query: 643 ILIGLNRRKQIPTGALFFDIA 705
I R+ A+F D+A
Sbjct: 564 IRTAFEHREYCT--AIFLDVA 582
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 105 bits (253), Expect = 4e-23
Identities = 56/141 (39%), Positives = 79/141 (56%)
Frame = +1
Query: 283 LQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPT 462
L PRK+PG D I R L LP I + + NA FP WK++ ++ I KPGK
Sbjct: 444 LNPRKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDK 503
Query: 463 NETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSKHSCVQQVHRLTEH 642
+ SSYRPISLL+ + K++E++L R+ + N L QFGFR KH ++QV+R+T
Sbjct: 504 TQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSE 563
Query: 643 ILIGLNRRKQIPTGALFFDIA 705
I R+ A+F D+A
Sbjct: 564 IRTAFEHREYCT--AIFLDVA 582
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 99.1 bits (236), Expect = 5e-21
Identities = 56/152 (36%), Positives = 82/152 (53%)
Frame = +1
Query: 247 ITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKEA 426
+T EV + L RK+PG DGI N +LK LP I + I N + FP WK A
Sbjct: 461 VTYPEVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIA 520
Query: 427 DVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSKH 606
++ I KPGKP + SYRPISLLS + KI E+L++ RL F+ + L Q+GFR+
Sbjct: 521 KIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGL 580
Query: 607 SCVQQVHRLTEHILIGLNRRKQIPTGALFFDI 702
+ + +L +I + ++ + G + DI
Sbjct: 581 NTILPTLKLRNYIKESIQSKQSV--GLVTLDI 610
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 99.1 bits (236), Expect = 5e-21
Identities = 56/152 (36%), Positives = 82/152 (53%)
Frame = +1
Query: 247 ITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKEA 426
+T EV + L RK+PG DGI N +LK LP I + I N + FP WK A
Sbjct: 409 VTYPEVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIA 468
Query: 427 DVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSKH 606
++ I KPGKP + SYRPISLLS + KI E+L++ RL F+ + L Q+GFR+
Sbjct: 469 KIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGL 528
Query: 607 SCVQQVHRLTEHILIGLNRRKQIPTGALFFDI 702
+ + +L +I + ++ + G + DI
Sbjct: 529 NTILPTLKLRNYIKESIQSKQSV--GLVTLDI 558
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 97.5 bits (232), Expect = 2e-20
Identities = 61/168 (36%), Positives = 83/168 (49%)
Frame = +1
Query: 202 VERRASLPPSDALPPITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILN 381
V R P P T ++D NL P+K+PG D I + LP + + + N
Sbjct: 422 VNRHQQHTPIVFRPKEITKIIKD---NLSPKKSPGYDLITPEMIIQLPHSAVRYITKLFN 478
Query: 382 AAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTA 561
A FP WK +I I KPGK SSYRPISLLS I K++E+ L RL T
Sbjct: 479 AITKLGYFPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRLNQHQTY 538
Query: 562 NKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIA 705
+ I+ QFGFR H ++QV+R+T I R+ A+F D++
Sbjct: 539 HNIIPAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCT--AVFLDVS 584
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 86.6 bits (205), Expect = 3e-17
Identities = 46/137 (33%), Positives = 73/137 (53%)
Frame = +1
Query: 295 KAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETS 474
K+PG+D + LK L L L I N +T +P W+ A +I I KP KP ++ +
Sbjct: 452 KSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDIN 511
Query: 475 SYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIG 654
SYRPISLLS +GK E+++ +RL F+ + ++ Q F+S HS + + R+
Sbjct: 512 SYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNA 571
Query: 655 LNRRKQIPTGALFFDIA 705
L+ + + A F+ A
Sbjct: 572 LSTKNHVSILATDFERA 588
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 79.4 bits (187), Expect = 4e-15
Identities = 43/139 (30%), Positives = 69/139 (49%)
Frame = +1
Query: 223 PPSDALPPITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCI 402
PP+ P IT+ EV +A ++P KAPG DGI +K + + +
Sbjct: 394 PPASDFPCITSCEVVEAAKRIRPNKAPGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGV 453
Query: 403 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDE 582
FP WK+ ++ + K P N SYRP+ LL +GK++ER+L R+ + L +
Sbjct: 454 FPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESPTGLQGQ 513
Query: 583 QFGFRSKHSCVQQVHRLTE 639
Q+GFR S + + +T+
Sbjct: 514 QYGFRKGKSTLDALKSVTD 532
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 73.7 bits (173), Expect = 2e-13
Identities = 42/122 (34%), Positives = 65/122 (53%)
Frame = +1
Query: 340 LPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIY 519
LP+ + + + NA FP WK++ +I I KP K + S YRPISLL+ + K++
Sbjct: 5 LPMCAVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPS-YRPISLLTCLSKLF 63
Query: 520 ERLLRKRLWDFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFD 699
E+ L R+ + + L QF F +KH ++QV+R+T I R+ ALF D
Sbjct: 64 EKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHREYCT--ALFLD 121
Query: 700 IA 705
+A
Sbjct: 122 VA 123
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 66.5 bits (155), Expect = 3e-11
Identities = 43/121 (35%), Positives = 63/121 (52%)
Frame = +1
Query: 247 ITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILNAAMTHCIFPAVWKEA 426
IT E+ A+ L+ APG + I + +K + + N I P +K +
Sbjct: 433 ITYLELSSALQTLKGC-APGLNRISYQMIKNSSHTTKNRITKLFNEIFNSHI-PQAYKTS 490
Query: 427 DVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVTANKILIDEQFGFRSKH 606
+I I KP +TSSYRPISL I KI ++++ KRLW VT N ++ D+QFGF+
Sbjct: 491 LIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGK 550
Query: 607 S 609
S
Sbjct: 551 S 551
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 60.9 bits (141), Expect = 2e-09
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Frame = +1
Query: 205 ERRASLPPSDALPP-ITTDEVRDAIHNLQPRKAPGSDGIHNRALKFLPVQLIAMLATILN 381
E A ++ +PP + EV + L+ R++PG DGI+ K + + LA++ +
Sbjct: 419 ESEAPTAIAEEVPPALEVFEVDTCVARLKSRRSPGLDGINGTICKAVWRAIPEHLASLFS 478
Query: 382 AAMTHCIFPAVWKEADVIGIHK-PGKPTNETSSYRPISLLSTIGKIYERLLRKRLWDFVT 558
+ FPA WK V+ + K P K E SSYR I LL GK+ E ++ R+ + +
Sbjct: 479 RCIRLGYFPAEWKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLEAIMVNRVREVLP 538
Query: 559 ANKILIDEQFGFRSKHSCVQQVHR 630
QFGFR + CV+ R
Sbjct: 539 EG---CRWQFGFR-QGRCVEDAWR 558
>BT003320-1|AAO25080.1| 798|Drosophila melanogaster AT11823p
protein.
Length = 798
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 150 HQHSTRGPRTHRVSRQGGRAQSLPAA 227
HQH R P HR +R G + SL AA
Sbjct: 406 HQHQHRQPHPHRTTRSGRKRCSLEAA 431
>AY069327-1|AAL39472.2| 552|Drosophila melanogaster LD04591p
protein.
Length = 552
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 150 HQHSTRGPRTHRVSRQGGRAQSLPAA 227
HQH R P HR +R G + SL AA
Sbjct: 160 HQHQHRQPHPHRTTRSGRKRCSLEAA 185
>AE014297-4076|AAF56673.2| 980|Drosophila melanogaster CG6051-PA
protein.
Length = 980
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 150 HQHSTRGPRTHRVSRQGGRAQSLPAA 227
HQH R P HR +R G + SL AA
Sbjct: 588 HQHQHRQPHPHRTTRSGRKRCSLEAA 613
>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
isoform B protein.
Length = 7744
Score = 29.9 bits (64), Expect = 3.5
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 615 YARVFRAESELFVYENFVRGNKIPEAFPKEPFVDFSYRREETNR--TVTRSFVCRFARLM 442
Y + +L Y+NFV NKI + F K FVD EE R V R + R M
Sbjct: 471 YGHEEKVAQQLEQYKNFVSRNKIFQEFQK-AFVDMQQVVEEYKRDGNVPRKEINDIDRFM 529
Query: 441 YTDNVRF 421
Y R+
Sbjct: 530 YETEERW 536
>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
isoform D protein.
Length = 11707
Score = 29.9 bits (64), Expect = 3.5
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 615 YARVFRAESELFVYENFVRGNKIPEAFPKEPFVDFSYRREETNR--TVTRSFVCRFARLM 442
Y + +L Y+NFV NKI + F K FVD EE R V R + R M
Sbjct: 471 YGHEEKVAQQLEQYKNFVSRNKIFQEFQK-AFVDMQQVVEEYKRDGNVPRKEINDIDRFM 529
Query: 441 YTDNVRF 421
Y R+
Sbjct: 530 YETEERW 536
>BT001724-1|AAN71479.1| 568|Drosophila melanogaster RE69557p
protein.
Length = 568
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 328 ALKFLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGK 456
A+ F +++ L T+ T+ + P +EAD IG+ K K
Sbjct: 512 AMLFAGAAIVSGLLTLFFPETTNVVLPTTVQEADAIGVKKQSK 554
>AE014296-3637|AAF51793.2| 568|Drosophila melanogaster CG7442-PA
protein.
Length = 568
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 328 ALKFLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGK 456
A+ F +++ L T+ T+ + P +EAD IG+ K K
Sbjct: 512 AMLFAGAAIVSGLLTLFFPETTNVVLPTTVQEADAIGVKKQSK 554
>AY058796-1|AAL14025.1| 570|Drosophila melanogaster SD10848p
protein.
Length = 570
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 340 KILARGCGCRRSLVPS*VGGCGS 272
K + GCGC R PS G CGS
Sbjct: 444 KPVNNGCGCARPSAPSSAGCCGS 466
>AJ271817-4|CAB72252.1| 791|Drosophila melanogaster heavy
metal-responsive transcriptionfactor-1 protein.
Length = 791
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 340 KILARGCGCRRSLVPS*VGGCGS 272
K + GCGC R PS G CGS
Sbjct: 665 KPVNNGCGCARPSAPSSAGCCGS 687
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,077,403
Number of Sequences: 53049
Number of extensions: 739017
Number of successful extensions: 2068
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2065
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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