BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0921 (734 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 29 0.060 DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 29 0.060 DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 28 0.079 DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.7 AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 1.7 DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 3.9 AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 22 6.9 DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse tr... 21 9.1 >DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 28.7 bits (61), Expect = 0.060 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 645 VISEIEINFNYFIERNKNLFINTYVKLKYS 734 +IS + N+NY K L+ N Y KL Y+ Sbjct: 81 IISSLSNNYNYNNNNYKKLYCNNYKKLYYN 110 >DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 28.7 bits (61), Expect = 0.060 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 645 VISEIEINFNYFIERNKNLFINTYVKLKYS 734 +IS + N+NY K L+ N Y KL Y+ Sbjct: 81 IISSLSNNYNYNNNNYKKLYCNNYKKLYYN 110 >DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 28.3 bits (60), Expect = 0.079 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 645 VISEIEINFNYFIERNKNLFINTYVKLKYS 734 +IS + N+NY K L+ N Y KL Y+ Sbjct: 81 IISSLSNNYNYNNNNYKKLYCNNYRKLYYN 110 >DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor 2 protein. Length = 581 Score = 23.8 bits (49), Expect = 1.7 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Frame = -2 Query: 469 YNICFNKLKEQFWLML-NI*IKHSEDSSE 386 YNI NK +E F LML N K S SE Sbjct: 348 YNIMSNKFREAFKLMLPNCCGKWSSQKSE 376 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 23.8 bits (49), Expect = 1.7 Identities = 11/37 (29%), Positives = 20/37 (54%) Frame = +3 Query: 600 YNNVIDVLRIVTTVYVISEIEINFNYFIERNKNLFIN 710 +NN I LR + +Y + ++N +E N+N+ N Sbjct: 384 WNNKISALRALNDLYNVKNTLDSYNGSMEINQNIAQN 420 >DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex determiner protein. Length = 182 Score = 22.6 bits (46), Expect = 3.9 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = +3 Query: 645 VISEIEINFNYFIERNKNLFINTYVKLKY 731 +IS + N+NY N N N Y K Y Sbjct: 81 IISSLSNNYNYSNYNNYNNNYNNYNKKLY 109 >AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein protein. Length = 411 Score = 21.8 bits (44), Expect = 6.9 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -3 Query: 96 NYIVSAFQTMRVRLRRCDRL 37 N I S +RVR+ CDRL Sbjct: 104 NKIDSIINIIRVRVDACDRL 123 >DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse transcriptase protein. Length = 42 Score = 21.4 bits (43), Expect = 9.1 Identities = 10/30 (33%), Positives = 14/30 (46%) Frame = +1 Query: 331 FSLMQLIVTFFLYFVSHCVHLNLQNVLFKC 420 F+L L F YF +C+H + KC Sbjct: 5 FTLQSLKKDFGTYFQQYCLHHKILIKKNKC 34 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 186,054 Number of Sequences: 438 Number of extensions: 3948 Number of successful extensions: 10 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 22901220 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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