Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0920
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   284   4e-79
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.3  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  284 bits (697), Expect = 4e-79
 Identities = 131/137 (95%), Positives = 136/137 (99%)
 Frame = +1

Query: 307 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 486
           LNKTKPIWTRNADDI+Q+EYG+FYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRR PF
Sbjct: 279 LNKTKPIWTRNADDISQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRVPF 338

Query: 487 DLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKIL 666
           DLFENKKRKNNIKLYVRRVFIMDNCE+LIPEYLNFI+GVVDSEDLPLNISREMLQQNKIL
Sbjct: 339 DLFENKKRKNNIKLYVRRVFIMDNCEELIPEYLNFIKGVVDSEDLPLNISREMLQQNKIL 398

Query: 667 KVIRKNLVKKCLELFEE 717
           KVIRKNLVKKCLELFEE
Sbjct: 399 KVIRKNLVKKCLELFEE 415



 Score = 56.4 bits (130), Expect = 2e-10
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = +1

Query: 73  MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSN 177
           MPEE   Q  +VETFAFQAEIAQLMSLIINTFYSN
Sbjct: 1   MPEE--NQNGDVETFAFQAEIAQLMSLIINTFYSN 33


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 493 FENKKRKNNIKLYVRRVFI 549
           +EN++ ++ I L+VR VF+
Sbjct: 125 YENQRTRSRIHLFVRYVFV 143


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -3

Query: 111 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSA 1
           F  R+LCL F+ +F Y  +++ ++ +   G   ++ Q A
Sbjct: 75  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMA 113


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -3

Query: 111 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSA 1
           F  R+LCL F+ +F Y  +++ ++ +   G   ++ Q A
Sbjct: 31  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMA 69


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 475 RAPFDLFENKKRKNNIKLYVRRVFIMDNCED 567
           + PFD+F N     N+ + VR   ++ N ++
Sbjct: 653 KIPFDVFRNMLPVRNVSVDVRDNILLKNLQN 683


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 698 HFLTKFFLITFRILFC 651
           HF   F + T  +LFC
Sbjct: 168 HFFCAFIIFTMHLLFC 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,826
Number of Sequences: 336
Number of extensions: 2683
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)