Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0920
(719 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 247 8e-66
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 247 8e-66
04_01_0042 + 473912-474058,474208-474349,474442-476264 246 1e-65
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 245 3e-65
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 231 3e-61
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116... 164 7e-41
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 157 1e-38
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 151 7e-37
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 150 9e-37
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 149 2e-36
04_03_0846 - 20249085-20249192,20249418-20249501,20249687-202498... 31 1.2
02_05_0587 + 30162806-30163183,30163315-30163478,30163571-301636... 29 3.7
06_01_0001 - 18456-18521,18692-18874,19046-19153,19337-19396,197... 28 6.5
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 247 bits (604), Expect = 8e-66
Identities = 109/137 (79%), Positives = 129/137 (94%)
Frame = +1
Query: 307 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 486
+NK KPIW R ++IT++EY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPF
Sbjct: 263 MNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPF 322
Query: 487 DLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKIL 666
DLF+ +K++NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSEDLPLNISREMLQQNKIL
Sbjct: 323 DLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKIL 382
Query: 667 KVIRKNLVKKCLELFEE 717
KVIRKNLVKKC+ELF E
Sbjct: 383 KVIRKNLVKKCVELFFE 399
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1
Query: 100 AEVETFAFQAEIAQLMSLIINTFYSN 177
+E ETFAFQAEI QL+SLIINTFYSN
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSN 28
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 247 bits (604), Expect = 8e-66
Identities = 109/137 (79%), Positives = 129/137 (94%)
Frame = +1
Query: 307 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 486
+NK KPIW R ++IT++EY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPF
Sbjct: 263 MNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPF 322
Query: 487 DLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKIL 666
DLF+ +K++NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSEDLPLNISREMLQQNKIL
Sbjct: 323 DLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKIL 382
Query: 667 KVIRKNLVKKCLELFEE 717
KVIRKNLVKKC+ELF E
Sbjct: 383 KVIRKNLVKKCVELFFE 399
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1
Query: 100 AEVETFAFQAEIAQLMSLIINTFYSN 177
+E ETFAFQAEI QL+SLIINTFYSN
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSN 28
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 246 bits (603), Expect = 1e-65
Identities = 109/137 (79%), Positives = 127/137 (92%)
Frame = +1
Query: 307 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 486
+NK KPIW R ++I+++EY FYKSLTNDWEDHLAVKHFSVEGQLEF+A+LFVPRRAPF
Sbjct: 268 INKQKPIWLRKPEEISREEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPF 327
Query: 487 DLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKIL 666
DLF+ +K+ NNIKLYVRRVFIMDNCE+LIPE+L F++GVVDS+DLPLNISREMLQQNKIL
Sbjct: 328 DLFDTRKKMNNIKLYVRRVFIMDNCEELIPEWLGFVKGVVDSDDLPLNISREMLQQNKIL 387
Query: 667 KVIRKNLVKKCLELFEE 717
KVIRKNLVKKC+E+F E
Sbjct: 388 KVIRKNLVKKCIEMFFE 404
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +1
Query: 88 ETQPAEVETFAFQAEIAQLMSLIINTFYSN 177
+ Q AE ETFAFQAEI QL+SLIINTFYSN
Sbjct: 6 DVQMAEKETFAFQAEINQLLSLIINTFYSN 35
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 245 bits (599), Expect = 3e-65
Identities = 109/137 (79%), Positives = 128/137 (93%)
Frame = +1
Query: 307 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 486
+NK KPIW R ++IT++EY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPF
Sbjct: 263 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPF 322
Query: 487 DLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKIL 666
DLF+ +K+ NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSEDLPLNISREMLQQNKIL
Sbjct: 323 DLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKIL 382
Query: 667 KVIRKNLVKKCLELFEE 717
KVIRKNLVKKC+ELF E
Sbjct: 383 KVIRKNLVKKCVELFFE 399
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1
Query: 100 AEVETFAFQAEIAQLMSLIINTFYSN 177
+E ETFAFQAEI QL+SLIINTFYSN
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSN 28
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 231 bits (566), Expect = 3e-61
Identities = 103/128 (80%), Positives = 122/128 (95%)
Frame = +1
Query: 334 RNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENKKRK 513
R ++IT++EY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ +K++
Sbjct: 18 RKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQ 77
Query: 514 NNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKILKVIRKNLVK 693
NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSEDLPLNISREMLQQNKILKVIRKNLVK
Sbjct: 78 NNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVK 137
Query: 694 KCLELFEE 717
KC+ELF E
Sbjct: 138 KCVELFFE 145
>09_06_0076 +
20710482-20710670,20711313-20711547,20711664-20711689,
20712000-20712293,20712603-20712728,20712827-20712896,
20712992-20713182,20713394-20713519,20713878-20714279,
20714364-20714758,20714861-20715315,20715403-20715524,
20715653-20715693,20716026-20716129,20716363-20716576,
20717667-20717780,20718576-20718612
Length = 1046
Score = 164 bits (398), Expect = 7e-41
Identities = 75/95 (78%), Positives = 88/95 (92%)
Frame = +1
Query: 433 EGQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDS 612
EGQLEF+A+LFVP+ APFD+F+ +K+ NNIKLYVRRVFIMDNCE+LIPE+L+F+ GVVD
Sbjct: 553 EGQLEFKAILFVPKGAPFDIFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVEGVVDY 612
Query: 613 EDLPLNISREMLQQNKILKVIRKNLVKKCLELFEE 717
EDLPLNIS E+LQQNKILKVIRKNLVKKC+ELF E
Sbjct: 613 EDLPLNISFELLQQNKILKVIRKNLVKKCVELFFE 647
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 157 bits (380), Expect = 1e-38
Identities = 72/141 (51%), Positives = 104/141 (73%), Gaps = 4/141 (2%)
Frame = +1
Query: 307 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDH--LAVKHFSVEGQLEFRALLFVPRRA 480
LN K IW R+ ++T++EY FY SL D+ D L+ HF+ EG +EF+ALLFVP +A
Sbjct: 369 LNDVKAIWLRSPKEVTEEEYTKFYHSLAKDFGDDKPLSWSHFTAEGDVEFKALLFVPPKA 428
Query: 481 PFDLFEN--KKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQ 654
P DL+E+ K+N+KLYVRRVFI D ++L+P+YL+F++G+VDS+ LPLN+SREMLQQ
Sbjct: 429 PHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLKGLVDSDTLPLNVSREMLQQ 488
Query: 655 NKILKVIRKNLVKKCLELFEE 717
+ LK I+K L++K L++ +
Sbjct: 489 HSSLKTIKKKLIRKALDMIRK 509
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 88 ETQPAEVETFAFQAEIAQLMSLIINTFYSN 177
+T + E F FQAE+++LM +IIN+ YSN
Sbjct: 98 KTLRSSAEKFEFQAEVSRLMDIIINSLYSN 127
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 151 bits (365), Expect = 7e-37
Identities = 69/139 (49%), Positives = 104/139 (74%), Gaps = 3/139 (2%)
Frame = +1
Query: 310 NKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFD 489
N+TKPIW RN ++ + EY +FYK N++ D LA HF+ EG++EFR++L++P AP
Sbjct: 347 NETKPIWMRNPKEVEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMAPLS 406
Query: 490 LFE--NKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVVDSEDLPLNISREMLQQNK 660
E N K K NI+LYV+RVFI D+ + +L P YL+F++GVVDS DLPLN+SRE+LQ+++
Sbjct: 407 NEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESR 465
Query: 661 ILKVIRKNLVKKCLELFEE 717
I++++RK LV+K ++ +E
Sbjct: 466 IVRIMRKRLVRKTFDMIQE 484
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +1
Query: 94 QPAEVETFAFQAEIAQLMSLIINTFYSN 177
+ A E F +QAE+++L+ LI+++ YS+
Sbjct: 78 EEAAGEQFEYQAEVSRLLDLIVHSLYSH 105
>08_02_1073 - 24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 150 bits (364), Expect = 9e-37
Identities = 70/139 (50%), Positives = 104/139 (74%), Gaps = 3/139 (2%)
Frame = +1
Query: 310 NKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFD 489
N+TKPIW R+ +I + EY +FYK N++ D LA HF+ EG++EFR++L++P AP
Sbjct: 597 NETKPIWMRSPKEIEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMAPLS 656
Query: 490 LFE--NKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVVDSEDLPLNISREMLQQNK 660
E N K KN I+LYV+RVFI D+ + +L P YL+F++GVVDS DLPLN+SRE+LQ+++
Sbjct: 657 NEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESR 715
Query: 661 ILKVIRKNLVKKCLELFEE 717
I++++RK LV+K ++ EE
Sbjct: 716 IVRIMRKRLVRKTFDMIEE 734
Score = 34.3 bits (75), Expect = 0.099
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +1
Query: 82 EMETQPAEVETFAFQAEIAQLMSLIINTFYSN 177
E + AE E F +QAE+++LM LI+++ YS+
Sbjct: 333 EKAEETAEEEKFEYQAEVSRLMDLIVHSLYSH 364
>12_02_0522 - 19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 149 bits (361), Expect = 2e-36
Identities = 65/134 (48%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
Frame = +1
Query: 310 NKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFD 489
N+T+PIW RN +++ +EY +FYK N++ D LA HF+ EG++EFR++L+VP D
Sbjct: 610 NETQPIWLRNPREVSTEEYNEFYKKTFNEYMDPLASSHFTTEGEVEFRSILYVPATKKED 669
Query: 490 LFENKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVVDSEDLPLNISREMLQQNKIL 666
+ + K + NI+LYV+RVFI D+ + +L P YL+F+RGVVDS DLPLN+SRE+LQ+++I+
Sbjct: 670 ITDRKTK--NIRLYVKRVFISDDFDGELFPRYLSFVRGVVDSNDLPLNVSREILQESRIV 727
Query: 667 KVIRKNLVKKCLEL 708
+++RK LV+K ++
Sbjct: 728 RIMRKRLVRKAFDM 741
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 79 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSN 177
+ +T P VE +QAE+ +LM LI+++ YSN
Sbjct: 345 DSSDTPP--VEKHEYQAEVNRLMDLIVHSLYSN 375
>04_03_0846 -
20249085-20249192,20249418-20249501,20249687-20249803,
20249899-20249979,20250563-20250622,20250762-20250804,
20250899-20250997,20251260-20251531,20251765-20251886,
20252376-20252517
Length = 375
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 328 WTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFS 429
W NAD +T++EYG + SL N+ + A+ H S
Sbjct: 237 WNPNADTMTRNEYGVWEISLPNNADGSPAIPHGS 270
>02_05_0587 +
30162806-30163183,30163315-30163478,30163571-30163654,
30163737-30163794,30164092-30164145,30164244-30164309,
30164310-30164381,30164547-30164627,30165361-30165533,
30165916-30166018,30166148-30166279,30166432-30166554,
30166898-30167002,30167397-30167722,30167919-30168258,
30169973-30170113,30170589-30170801,30170901-30171119,
30171272-30171619,30171711-30172043,30172548-30172601
Length = 1188
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 544 FIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKILKVIRKNL 687
FI+D CE I +Y F+ G S L L+ + + + +LK + ++L
Sbjct: 438 FILDCCESNIAKYTKFLEG--SSGSLQLSTNSKQANRTLLLKQLARDL 483
>06_01_0001 -
18456-18521,18692-18874,19046-19153,19337-19396,
19755-19937,20109-20291,20816-20998,21170-21352,
21524-21581,21878-21935,22586-22643,22938-22995,
23292-23349,23998-24007
Length = 482
Score = 28.3 bits (60), Expect = 6.5
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 368 ETSTNPLPM-IGRTILQSNTSPLKV-S*SSEHYFLCHVVHLLTCLKTRSARTISSCMYE- 538
ET+ PM I R I S+ PL++ S E LC + L T LKT + C E
Sbjct: 336 ETTAASWPMVISRKI--SSVPPLQIQSLKGESNVLCAIPILTTSLKTSCGPSDIRCFAET 393
Query: 539 EFSSWTTVRISSQSTLTS 592
+SW R + Q TLT+
Sbjct: 394 TAASWPMCR-ARQPTLTT 410
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,012,298
Number of Sequences: 37544
Number of extensions: 270721
Number of successful extensions: 769
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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