Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0920
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 262 1e-70
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 171 6e-43
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 93 2e-19
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 93 2e-19
Z81047-7|CAB02834.1| 297|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81130-5|CAB03420.1| 361|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 28 7.7
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 262 bits (643), Expect = 1e-70
Identities = 119/137 (86%), Positives = 132/137 (96%)
Frame = +1
Query: 307 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 486
LNKTKPIWTRN DDI+ +EY +FYKSL+NDWEDHLAVKHFSVEGQLEFRALLFVP+RAPF
Sbjct: 261 LNKTKPIWTRNPDDISNEEYAEFYKSLSNDWEDHLAVKHFSVEGQLEFRALLFVPQRAPF 320
Query: 487 DLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKIL 666
DLFENKK KN+IKLYVRRVFIM+NCE+L+PEYLNFI+GVVDSEDLPLNISREMLQQ+KIL
Sbjct: 321 DLFENKKSKNSIKLYVRRVFIMENCEELMPEYLNFIKGVVDSEDLPLNISREMLQQSKIL 380
Query: 667 KVIRKNLVKKCLELFEE 717
KVIRKNLVKKC+EL +E
Sbjct: 381 KVIRKNLVKKCMELIDE 397
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1
Query: 109 ETFAFQAEIAQLMSLIINTFYSN 177
ETFAFQAEIAQLMSLIINTFYSN
Sbjct: 6 ETFAFQAEIAQLMSLIINTFYSN 28
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 171 bits (415), Expect = 6e-43
Identities = 76/138 (55%), Positives = 109/138 (78%), Gaps = 1/138 (0%)
Frame = +1
Query: 307 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 486
+N KPIW R + + +DEY FYKS+T D E+ L+ HFS EG++ FR++L+VP+++P
Sbjct: 315 VNNVKPIWMRKPNQVEEDEYKQFYKSITKDSEEPLSHVHFSAEGEVSFRSILYVPKKSPN 374
Query: 487 DLFENK-KRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKI 663
D+F+N K NIKLYVRRVFI D+ D++P+YL+FIRG+VDS+DLPLN+SRE LQQ+K+
Sbjct: 375 DMFQNYGKVIENIKLYVRRVFITDDFADMLPKYLSFIRGIVDSDDLPLNVSRENLQQHKL 434
Query: 664 LKVIRKNLVKKCLELFEE 717
LKVI+K LV+K L++ ++
Sbjct: 435 LKVIKKKLVRKVLDMLKK 452
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 100 AEVETFAFQAEIAQLMSLIINTFYSN 177
++ E FQAE+ ++M LIIN+ Y N
Sbjct: 59 SKAEKHEFQAEVNRMMKLIINSLYRN 84
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 92.7 bits (220), Expect = 2e-19
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 7/139 (5%)
Frame = +1
Query: 307 LNKTKPIWTRNADDITQDEYGDFYKSLTN-DWEDHLAVK-----HFSVEGQLEFRALLFV 468
+N IWT A ++ ++ + F+K L + + + HF + + R+++++
Sbjct: 248 VNNLNAIWTMQAREVNKEMHETFFKQLVKTQGKQEMYTRPQYTIHFQTDTPVSLRSVIYI 307
Query: 469 PRRAPFDL-FENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREM 645
P+ L F ++ + LY RRV I + ++LIP YL F+ GVVDSED+PLN+SREM
Sbjct: 308 PQTQFNQLTFMAQQTMCGLSLYARRVLIKPDAQELIPNYLRFVIGVVDSEDIPLNLSREM 367
Query: 646 LQQNKILKVIRKNLVKKCL 702
LQ N +L+ +RK + K L
Sbjct: 368 LQNNPVLRKLRKIITDKIL 386
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 92.7 bits (220), Expect = 2e-19
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 7/139 (5%)
Frame = +1
Query: 307 LNKTKPIWTRNADDITQDEYGDFYKSLTN-DWEDHLAVK-----HFSVEGQLEFRALLFV 468
+N IWT A ++ ++ + F+K L + + + HF + + R+++++
Sbjct: 248 VNNLNAIWTMQAREVNKEMHETFFKQLVKTQGKQEMYTRPQYTIHFQTDTPVSLRSVIYI 307
Query: 469 PRRAPFDL-FENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREM 645
P+ L F ++ + LY RRV I + ++LIP YL F+ GVVDSED+PLN+SREM
Sbjct: 308 PQTQFNQLTFMAQQTMCGLSLYARRVLIKPDAQELIPNYLRFVIGVVDSEDIPLNLSREM 367
Query: 646 LQQNKILKVIRKNLVKKCL 702
LQ N +L+ +RK + K L
Sbjct: 368 LQNNPVLRKLRKIITDKIL 386
>Z81047-7|CAB02834.1| 297|Caenorhabditis elegans Hypothetical
protein C41G6.9 protein.
Length = 297
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -1
Query: 716 SSNSSRHFLTKF---FLITFRILFC*SISREMFRGRSSLSTTPLMKLRYSGMRSSQLSMM 546
S+NS+ F F FL+ + F SISR +FR + +TT M+ ++ S+ +
Sbjct: 187 SNNSTACFCLIFVLSFLLPQNLFFVSSISRNLFRMAAKSATTIRMQKKFFVALSATHLAV 246
Query: 545 KTLRTYSLI 519
TL + L+
Sbjct: 247 STLAFHGLL 255
>Z81130-5|CAB03420.1| 361|Caenorhabditis elegans Hypothetical
protein T23G11.7a protein.
Length = 361
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 469 PRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREML 648
P FD K + +I+L + N D + EY++ GVV++ NIS E+
Sbjct: 41 PVETTFDEISWKLLQTSIRLEKDHI----NDRDSLREYIDEPGGVVNNCQRAQNISMEIE 96
Query: 649 QQNKILKVIRKNLVK 693
Q+N + +R+ + K
Sbjct: 97 QKNVSCEKLREKIAK 111
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 451 RALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMD 555
RAL +PR P L NKK + ++ V + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 451 RALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMD 555
RAL +PR P L NKK + ++ V + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 451 RALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMD 555
RAL +PR P L NKK + ++ V + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 451 RALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMD 555
RAL +PR P L NKK + ++ V + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 451 RALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMD 555
RAL +PR P L NKK + ++ V + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,237,477
Number of Sequences: 27780
Number of extensions: 245110
Number of successful extensions: 725
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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