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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0918
         (699 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   386   e-108
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...   221   6e-59
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...   208   6e-55
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...   157   1e-39
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...   111   1e-25
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...   109   3e-25
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...   102   4e-23
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    64   2e-11
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po...    52   1e-07
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    33   0.039
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    32   0.069
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce...    32   0.091
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr...    31   0.16 
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo...    29   0.48 
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc...    29   0.85 
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos...    28   1.1  
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos...    28   1.5  
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur...    27   2.6  
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa...    27   2.6  
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual         27   2.6  
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces...    27   2.6  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    27   3.4  
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p...    26   4.5  
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch...    26   4.5  
SPBP4G3.03 |||PI31 proteasome regulator related|Schizosaccharomy...    26   6.0  
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|...    26   6.0  
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S...    26   6.0  
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ...    26   6.0  
SPAC14C4.12c |||SWIRM domain protein|Schizosaccharomyces pombe|c...    26   6.0  
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc...    26   6.0  
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo...    25   7.9  
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc...    25   7.9  

>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  386 bits (951), Expect = e-108
 Identities = 176/190 (92%), Positives = 185/190 (97%)
 Frame = +2

Query: 83  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 262
           +EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2   EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61

Query: 263 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 442
           RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121

Query: 443 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 622
           I+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 181

Query: 623 GRDLTDYLME 652
           GRDLTDYLM+
Sbjct: 182 GRDLTDYLMK 191



 Score = 31.1 bits (67), Expect = 0.16
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +3

Query: 651 KILTERGYSFTTTAER 698
           KIL ERGY+F+TTAER
Sbjct: 191 KILMERGYTFSTTAER 206


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score =  221 bits (541), Expect = 6e-59
 Identities = 98/183 (53%), Positives = 137/183 (74%), Gaps = 1/183 (0%)
 Frame = +2

Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 280
           + +DNGSG  KAGFAGDD P+ +FP+ VGR +H+ VM    QKD +VG EAQ+ RG+L +
Sbjct: 12  ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71

Query: 281 KYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 457
           + PIE GI+ NW DME+IW + + ++ L   PEEHP+LLTE PL    N+EK+ +  +ET
Sbjct: 72  QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131

Query: 458 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 637
            N PA+  ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GRD+T
Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVT 191

Query: 638 DYL 646
           DYL
Sbjct: 192 DYL 194


>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score =  208 bits (508), Expect = 6e-55
 Identities = 97/189 (51%), Positives = 136/189 (71%), Gaps = 2/189 (1%)
 Frame = +2

Query: 89  EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 262
           E A +V+DNG+G  K G+A D+ PR  FPSIVGRP  R +     +  KD  VGDEA++ 
Sbjct: 2   ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61

Query: 263 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 442
           R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P    +LLTE P+NP ANREKM +
Sbjct: 62  RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121

Query: 443 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 622
            MFE +    +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE   L H + RLD+A
Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVA 181

Query: 623 GRDLTDYLM 649
           GRD T YL+
Sbjct: 182 GRDATRYLI 190


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score =  157 bits (381), Expect = 1e-39
 Identities = 87/214 (40%), Positives = 123/214 (57%), Gaps = 32/214 (14%)
 Frame = +2

Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 229
           +++DNG+G  K G+AG+DAP  VFP+++   R  G   G         M  K        
Sbjct: 8   IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66

Query: 230 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 388
                 D ++G++A  K     +L YPI HG + NWD ME+ W  + +  LR  PE+H  
Sbjct: 67  RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126

Query: 389 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 544
           LLTE PLNP  NRE   +IMFE+FN   +Y+A+QAVL+L AS  +        TG V+DS
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDS 186

Query: 545 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 646
           GDGV+H +P+ EGY +  +I  + LAGRD+T ++
Sbjct: 187 GDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFV 220


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score =  111 bits (266), Expect = 1e-25
 Identities = 58/187 (31%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
 Frame = +2

Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 280
           LV+DNGS   +AG+ G+  P+ VF ++V R R +     + +  + VG++   + G  ++
Sbjct: 27  LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSI 82

Query: 281 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 457
            + P E  +++NWD ME++  +TF  +L +   EHP+ +TE   NP   R  MT+++FE 
Sbjct: 83  ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141

Query: 458 FNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 631
           +N P++   I  + S Y + +  ++GIVL+ G+  SH +P+  G  +     R+   G  
Sbjct: 142 YNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQ 201

Query: 632 LTDYLME 652
            + YL++
Sbjct: 202 SSSYLLK 208


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score =  109 bits (263), Expect = 3e-25
 Identities = 63/189 (33%), Positives = 97/189 (51%)
 Frame = +2

Query: 86  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 265
           +EV+A+V+D GS   + GF+G+D P+ V PS  G       + G    + Y+    +S  
Sbjct: 9   DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61

Query: 266 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 445
           G + +K  I +G V NWD    +W +    +L+  P EHP+L+TE   NP  NR K  + 
Sbjct: 62  G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLET 120

Query: 446 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 625
           MFE+   PA Y+A Q   + +ASG+ T  ++D G   S    IY+G+ L         +G
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSG 180

Query: 626 RDLTDYLME 652
             + D L +
Sbjct: 181 NAINDILAQ 189


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score =  102 bits (245), Expect = 4e-23
 Identities = 53/182 (29%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
 Frame = +2

Query: 86  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 265
           EE+ +LV+D GS   + G+AG+++P  + PS      + GV   +  ++ YV DE Q   
Sbjct: 8   EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61

Query: 266 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 439
            I  + +K    +GI+ +W+     W      +L+V P E+ +++TE   NP++ R+++ 
Sbjct: 62  PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIM 121

Query: 440 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 619
           +  FE  + PA Y+  QAV   +A+ ++T +++D G   +   P+ +G  +   I +  L
Sbjct: 122 EAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSL 181

Query: 620 AG 625
           AG
Sbjct: 182 AG 183


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 64.1 bits (149), Expect = 2e-11
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
 Frame = +2

Query: 287 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 454
           PI+ G V +W+ ++  W H  Y+ L   P +    +PV L         +RE  TQ  FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171

Query: 455 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 634
               P   +A + ++ LYA G   G+V+D G   +   PI +G  +  A  +L L GR +
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYM 231

Query: 635 TDYL 646
           T +L
Sbjct: 232 TQHL 235


>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 401

 Score = 51.6 bits (118), Expect = 1e-07
 Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 18/202 (8%)
 Frame = +2

Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 280
           +V+DNG+   KAGFAG        P+ + R +        G +  ++G+E  +     TL
Sbjct: 8   IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57

Query: 281 KYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIM 448
           ++   H  G + +W     +W     N   + P   ++ +LLT+      +      Q++
Sbjct: 58  QFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLV 117

Query: 449 FETFNTPAMYVAIQAVLSLYASGRTT--------------GIVLDSGDGVSHTVPIYEGY 586
           FE F   A      A L  +  G  T               +V+DSG   +H +P+ +  
Sbjct: 118 FEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFS 177

Query: 587 ALPHAILRLDLAGRDLTDYLME 652
               A+ R+D+ G+ LT+YL E
Sbjct: 178 VQEQAVKRVDVGGKLLTNYLKE 199


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 33.1 bits (72), Expect = 0.039
 Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = +3

Query: 447 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPSCVWT*P 623
           C+  ++ PP T  S   S    P VPP S   T   + PT   ST    SP P+      
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT------ 224

Query: 624 VATSQTTSWKILTERGYSFTT 686
            +TS TTS  I T    S +T
Sbjct: 225 TSTSCTTSTSIPTGGSSSLST 245



 Score = 31.1 bits (67), Expect = 0.16
 Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +3

Query: 447 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPSCVWT*P 623
           C+  ++ PP T  S   S    P VPP S   T   + PT   ST    +P P+      
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT------ 167

Query: 624 VATSQTTSWKILTERGYSFTTT 689
            +TS TTS  I    G S  +T
Sbjct: 168 TSTSCTTSTSIPPTGGSSSLST 189



 Score = 29.9 bits (64), Expect = 0.37
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -1

Query: 243 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 82
           PT  S  P+ PT+ P     P    N     S P         PL+TTN  TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455



 Score = 28.3 bits (60), Expect = 1.1
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +3

Query: 450 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVA 629
           S  ST PP  S S   +  +  +    SC T  ++ PT   +T  T +  P+   T    
Sbjct: 365 SSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTT 424

Query: 630 TSQTTSWKI 656
           T+ TTS  +
Sbjct: 425 TNCTTSTSV 433



 Score = 27.5 bits (58), Expect = 2.0
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
 Frame = +3

Query: 450 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVA 629
           S  ++  P  S S  C+  T   +PP    T       P  ST  T +P P      P +
Sbjct: 324 STGTSSSPLPSTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPP------PAS 375

Query: 630 TSQT-TSWKILTERGYSFTTT 689
           TS T TS   L     S TT+
Sbjct: 376 TSSTGTSSSPLLSTSTSCTTS 396



 Score = 27.1 bits (57), Expect = 2.6
 Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = +3

Query: 459 STRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATS 635
           ST  P T  S   S    P VPP S   T   + PT   ST    SP P+       +TS
Sbjct: 232 STSIP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT------TSTS 284

Query: 636 QTTSWKI 656
            TTS  I
Sbjct: 285 CTTSTSI 291



 Score = 26.2 bits (55), Expect = 4.5
 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
 Frame = +3

Query: 450 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVA 629
           S  +   P  + S  C+  T   +PP    T       P  ST  T +P P      P +
Sbjct: 270 STDTNSSPLPTTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPP------PAS 321

Query: 630 TSQT-TSWKILTERGYSFTTT 689
           TS T TS   L     S TT+
Sbjct: 322 TSSTGTSSSPLPSTSTSCTTS 342


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 32.3 bits (70), Expect = 0.069
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +3

Query: 471  PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 605
            P T+P  P    T PV P  S   P+   P P PS++    P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080



 Score = 31.9 bits (69), Expect = 0.091
 Identities = 21/58 (36%), Positives = 27/58 (46%)
 Frame = +3

Query: 462  TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATS 635
            ++P  TSP+ P +R   P VP +S   P    P P PS      P PS     P+ TS
Sbjct: 997  SKPVSTSPAAPLARV--PPVPKLSSKAP----PVPLPSADAPPIPVPSTAPPVPIPTS 1048



 Score = 28.3 bits (60), Expect = 1.1
 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
 Frame = +3

Query: 468  PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPCPSTKDTHSPTPS 605
            PP  +P  P      P VPP S   P     A + P P P+ K    P PS
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243



 Score = 26.6 bits (56), Expect = 3.4
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
 Frame = +3

Query: 468  PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTKDTHSPTPS 605
            PP   PS       +P   VPPV    P+   P P PS      P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137



 Score = 25.8 bits (54), Expect = 6.0
 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = +3

Query: 468  PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPS 605
            PP  +PS       +P   VPPV    P+   P P PS      P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214


>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1666

 Score = 31.9 bits (69), Expect = 0.091
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = +2

Query: 347  FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 490
            +Y  L    E+HP+LLT+  A L P+ +  ++ +I  ++ NTP +    VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451


>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1517

 Score = 31.1 bits (67), Expect = 0.16
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 146 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 289
           G+  PRA F  ++  P H G+++ M  KD   G+E  S +G  + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547


>SPCC18.03 |||shuttle craft like transcriptional
           regulator|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1077

 Score = 29.5 bits (63), Expect = 0.48
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 492 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 596
           PC+     + PPV+C TP    P  C   K  H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655


>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1016

 Score = 28.7 bits (61), Expect = 0.85
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = +3

Query: 474  CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTSWK 653
            C +PS+    C    + PV   +  T S TP P+T  + +PTP+   T    T+Q+T  +
Sbjct: 825  CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTST--TTTAQSTGMQ 879

Query: 654  ILTERGY 674
            +     Y
Sbjct: 880  LCGSNYY 886



 Score = 25.4 bits (53), Expect = 7.9
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 474  CTSPSK-PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTSW 650
            C +PS+  CS  +  + P     T AT + TP P+T  T +PT +   +  V     ++W
Sbjct: 914  CYNPSQYVCSDGS--LSPNTVTTTKATTTFTPTPTTTTTPTPTTTSATSTNVIAQCGSAW 971


>SPAC20G8.05c |cdc15||cell division control protein
           Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 927

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 254 VPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 165
           +  L+ K+PS PY  SRP   A   S  TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335


>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 731

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 501 RCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTPSCVWT*PVATS 635
           R   P  P V   + A  SP TP P  K+T +P+ S     P ATS
Sbjct: 500 RVAVPSTPSVRSASRAMTSPRTPLPRVKNTQNPSRSISAEPPSATS 545


>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
           deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 398

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 492 PCSRCTRPVVPPVSCWTPATVSPTPCPST 578
           P SR T+P+    S  +P  VSP   PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290


>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1628

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 21/86 (24%), Positives = 40/86 (46%)
 Frame = +1

Query: 403  SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRR 582
            +PQ +    E++ D++R++  +RH RR P +A  +  R  H  +   R R      ++ R
Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR---QNGNVNR 1481

Query: 583  IRTPPRHPASGLSRSRPHRLPHGRSS 660
                  + ++ +SR R     H  S+
Sbjct: 1482 NPRVSNNNSTNVSRERSSEANHRTSN 1507


>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 127

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 23/60 (38%), Positives = 28/60 (46%)
 Frame = -3

Query: 283 FEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIVYY 104
           F G   +F  CLI++IR  +SH            D  EHG   II C T L   G I+YY
Sbjct: 47  FAGLGIAFIYCLIAFIRE-MSHPSSR-------KDTMEHGL-PIILCST-LMLVGNILYY 96


>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 466

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 468 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 575
           PP   P    +  T PV  PV+    A   P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -1

Query: 246 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 130
           S T +SF   P+PT  P    LPT   NT +    P+ PAL
Sbjct: 64  SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101


>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 226

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 389 LLTEAPLNPKANREKMTQIMFETFN 463
           +L  APL+ +   +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205


>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1316

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 604  PASGLSRSRPHRLPHGRSSPSAATRSLPPP 693
            P S L  S P ++  G++SP ++  S  PP
Sbjct: 1160 PISNLETSYPFKIEEGQASPLSSPLSKTPP 1189


>SPBP4G3.03 |||PI31 proteasome regulator related|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 241

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 595 PRHPASGLSRSRPHRLPHGRSS 660
           P++P + L++  PH LPH R++
Sbjct: 150 PKNPHAFLAQDLPHGLPHRRAA 171


>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 194

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 508 RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHGRS-SPS 666
           R RS HR+  G  RR  P+R HL R     RH  +     R  R    R  SP+
Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHLSRHH---RHSTTNYHSKRDDRYERRREHSPN 190


>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
           Tor2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2337

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 283 FEGQDTSFALCLISYIRVLLSHTDHHA 203
           +EG+DT+      +Y+R++L  TD  A
Sbjct: 74  YEGEDTTRITRFANYLRIILPGTDQKA 100


>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
           subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 668

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +1

Query: 556 LPHRAHLRRIRTPPRHPASGLSRSRPHRLPHGRSSPSAATRSLP 687
           LP R+H  R   PPR             LP   S  S +  S P
Sbjct: 426 LPERSHKHRHSAPPRSKLISSKSEAGRALPGNTSGASISNTSSP 469


>SPAC14C4.12c |||SWIRM domain protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 297

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 27/110 (24%), Positives = 39/110 (35%), Gaps = 3/110 (2%)
 Frame = +1

Query: 367 RPRGTPSPAH*G--SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRA- 537
           R RG+P     G  +P  +G      P H    + +       ++A+ V    Y      
Sbjct: 132 RKRGSPDTPDSGHSTPHSKGDVHPGMPQHNTRFKQSSREFSSNTQAIDVANTPYELLPDY 191

Query: 538 GLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHGRSSPSAATRSLP 687
                 L  R+H R +R+  + P   LS      L H      AAT  LP
Sbjct: 192 SPDMSVLDKRSHPRPLRSEWKGPPLDLSNDENRHLLHPAELQLAATLRLP 241


>SPBC4C3.12 |sep1||fork head transcription factor
           Sep1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 663

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 489 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P-VATSQT 641
           KP S+ TRP +P    +T  T S  P P    +     + ++  P V++SQ+
Sbjct: 65  KPSSKATRPYIP---SYTRLTYSVPPLPIPPPSEQSLDTIIYRNPSVSSSQS 113


>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
            |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1224

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
 Frame = +3

Query: 486  SKPCSRCTRPVVPPVSCWT---PATVSPTPCPSTKDTHSPTPSCVWT*PV 626
            S+  S  T P  PP +  T   PA  SP P    +  H PT S     PV
Sbjct: 899  SRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPV 948


>SPAC29B12.07 |sec16||multidomain vesicle coat component
           Sec16|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1995

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 655 SSPSAATRSLPPPSG 699
           ++PS   RSLPPPSG
Sbjct: 636 ATPSNPPRSLPPPSG 650


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,132,637
Number of Sequences: 5004
Number of extensions: 72741
Number of successful extensions: 284
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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