BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0918 (699 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 386 e-108 SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 221 6e-59 SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 208 6e-55 SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 157 1e-39 SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 111 1e-25 SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 109 3e-25 SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 102 4e-23 SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 64 2e-11 SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 52 1e-07 SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 33 0.039 SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.069 SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.091 SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.16 SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 0.48 SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 29 0.85 SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 1.1 SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 28 1.5 SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 2.6 SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 27 2.6 SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 27 2.6 SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 2.6 SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.4 SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 4.5 SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 26 4.5 SPBP4G3.03 |||PI31 proteasome regulator related|Schizosaccharomy... 26 6.0 SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 26 6.0 SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 6.0 SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 26 6.0 SPAC14C4.12c |||SWIRM domain protein|Schizosaccharomyces pombe|c... 26 6.0 SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 26 6.0 SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 7.9 SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 7.9 >SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2|||Manual Length = 375 Score = 386 bits (951), Expect = e-108 Identities = 176/190 (92%), Positives = 185/190 (97%) Frame = +2 Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 262 +EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61 Query: 263 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 442 RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQ Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121 Query: 443 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 622 I+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLA Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 181 Query: 623 GRDLTDYLME 652 GRDLTDYLM+ Sbjct: 182 GRDLTDYLMK 191 Score = 31.1 bits (67), Expect = 0.16 Identities = 13/16 (81%), Positives = 15/16 (93%) Frame = +3 Query: 651 KILTERGYSFTTTAER 698 KIL ERGY+F+TTAER Sbjct: 191 KILMERGYTFSTTAER 206 >SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 379 Score = 221 bits (541), Expect = 6e-59 Identities = 98/183 (53%), Positives = 137/183 (74%), Gaps = 1/183 (0%) Frame = +2 Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 280 + +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L + Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71 Query: 281 KYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 457 + PIE GI+ NW DME+IW + + ++ L PEEHP+LLTE PL N+EK+ + +ET Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131 Query: 458 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 637 N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GRD+T Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVT 191 Query: 638 DYL 646 DYL Sbjct: 192 DYL 194 >SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual Length = 390 Score = 208 bits (508), Expect = 6e-55 Identities = 97/189 (51%), Positives = 136/189 (71%), Gaps = 2/189 (1%) Frame = +2 Query: 89 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 262 E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++ Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61 Query: 263 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 442 R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P+NP ANREKM + Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121 Query: 443 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 622 MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H + RLD+A Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVA 181 Query: 623 GRDLTDYLM 649 GRD T YL+ Sbjct: 182 GRDATRYLI 190 >SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces pombe|chr 1|||Manual Length = 427 Score = 157 bits (381), Expect = 1e-39 Identities = 87/214 (40%), Positives = 123/214 (57%), Gaps = 32/214 (14%) Frame = +2 Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 229 +++DNG+G K G+AG+DAP VFP+++ R G G M K Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66 Query: 230 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 388 D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126 Query: 389 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 544 LLTE PLNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DS Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDS 186 Query: 545 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 646 GDGV+H +P+ EGY + +I + LAGRD+T ++ Sbjct: 187 GDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFV 220 >SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe|chr 2|||Manual Length = 721 Score = 111 bits (266), Expect = 1e-25 Identities = 58/187 (31%), Positives = 105/187 (56%), Gaps = 3/187 (1%) Frame = +2 Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 280 LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++ Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSI 82 Query: 281 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 457 + P E +++NWD ME++ +TF +L + EHP+ +TE NP R MT+++FE Sbjct: 83 ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141 Query: 458 FNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 631 +N P++ I + S Y + + ++GIVL+ G+ SH +P+ G + R+ G Sbjct: 142 YNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQ 201 Query: 632 LTDYLME 652 + YL++ Sbjct: 202 SSSYLLK 208 >SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces pombe|chr 2|||Manual Length = 433 Score = 109 bits (263), Expect = 3e-25 Identities = 63/189 (33%), Positives = 97/189 (51%) Frame = +2 Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 265 +EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61 Query: 266 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 445 G + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K + Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLET 120 Query: 446 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 625 MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L +G Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSG 180 Query: 626 RDLTDYLME 652 + D L + Sbjct: 181 NAINDILAQ 189 >SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Schizosaccharomyces pombe|chr 1|||Manual Length = 430 Score = 102 bits (245), Expect = 4e-23 Identities = 53/182 (29%), Positives = 98/182 (53%), Gaps = 2/182 (1%) Frame = +2 Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 265 EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61 Query: 266 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 439 I + +K +GI+ +W+ W +L+V P E+ +++TE NP++ R+++ Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIM 121 Query: 440 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 619 + FE + PA Y+ QAV +A+ ++T +++D G + P+ +G + I + L Sbjct: 122 EAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSL 181 Query: 620 AG 625 AG Sbjct: 182 AG 183 >SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosaccharomyces pombe|chr 1|||Manual Length = 523 Score = 64.1 bits (149), Expect = 2e-11 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 4/124 (3%) Frame = +2 Query: 287 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 454 PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171 Query: 455 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 634 P +A + ++ LYA G G+V+D G + PI +G + A +L L GR + Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYM 231 Query: 635 TDYL 646 T +L Sbjct: 232 TQHL 235 >SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces pombe|chr 3|||Manual Length = 401 Score = 51.6 bits (118), Expect = 1e-07 Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 18/202 (8%) Frame = +2 Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 280 +V+DNG+ KAGFAG P+ + R + G + ++G+E + TL Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57 Query: 281 KYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIM 448 ++ H G + +W +W N + P ++ +LLT+ + Q++ Sbjct: 58 QFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLV 117 Query: 449 FETFNTPAMYVAIQAVLSLYASGRTT--------------GIVLDSGDGVSHTVPIYEGY 586 FE F A A L + G T +V+DSG +H +P+ + Sbjct: 118 FEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFS 177 Query: 587 ALPHAILRLDLAGRDLTDYLME 652 A+ R+D+ G+ LT+YL E Sbjct: 178 VQEQAVKRVDVGGKLLTNYLKE 199 >SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 800 Score = 33.1 bits (72), Expect = 0.039 Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Frame = +3 Query: 447 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPSCVWT*P 623 C+ ++ PP T S S P VPP S T + PT ST SP P+ Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT------ 224 Query: 624 VATSQTTSWKILTERGYSFTT 686 +TS TTS I T S +T Sbjct: 225 TSTSCTTSTSIPTGGSSSLST 245 Score = 31.1 bits (67), Expect = 0.16 Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Frame = +3 Query: 447 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPSCVWT*P 623 C+ ++ PP T S S P VPP S T + PT ST +P P+ Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT------ 167 Query: 624 VATSQTTSWKILTERGYSFTTT 689 +TS TTS I G S +T Sbjct: 168 TSTSCTTSTSIPPTGGSSSLST 189 Score = 29.9 bits (64), Expect = 0.37 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -1 Query: 243 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 82 PT S P+ PT+ P P N S P PL+TTN TS+S Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455 Score = 28.3 bits (60), Expect = 1.1 Identities = 20/69 (28%), Positives = 30/69 (43%) Frame = +3 Query: 450 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVA 629 S ST PP S S + + + SC T ++ PT +T T + P+ T Sbjct: 365 SSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTT 424 Query: 630 TSQTTSWKI 656 T+ TTS + Sbjct: 425 TNCTTSTSV 433 Score = 27.5 bits (58), Expect = 2.0 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 1/81 (1%) Frame = +3 Query: 450 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVA 629 S ++ P S S C+ T +PP T P ST T +P P P + Sbjct: 324 STGTSSSPLPSTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPP------PAS 375 Query: 630 TSQT-TSWKILTERGYSFTTT 689 TS T TS L S TT+ Sbjct: 376 TSSTGTSSSPLLSTSTSCTTS 396 Score = 27.1 bits (57), Expect = 2.6 Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = +3 Query: 459 STRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATS 635 ST P T S S P VPP S T + PT ST SP P+ +TS Sbjct: 232 STSIP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT------TSTS 284 Query: 636 QTTSWKI 656 TTS I Sbjct: 285 CTTSTSI 291 Score = 26.2 bits (55), Expect = 4.5 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 1/81 (1%) Frame = +3 Query: 450 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVA 629 S + P + S C+ T +PP T P ST T +P P P + Sbjct: 270 STDTNSSPLPTTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPP------PAS 321 Query: 630 TSQT-TSWKILTERGYSFTTT 689 TS T TS L S TT+ Sbjct: 322 TSSTGTSSSPLPSTSTSCTTS 342 >SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 1611 Score = 32.3 bits (70), Expect = 0.069 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = +3 Query: 471 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 605 P T+P P T PV P S P+ P P PS++ P PS Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080 Score = 31.9 bits (69), Expect = 0.091 Identities = 21/58 (36%), Positives = 27/58 (46%) Frame = +3 Query: 462 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATS 635 ++P TSP+ P +R P VP +S P P P PS P PS P+ TS Sbjct: 997 SKPVSTSPAAPLARV--PPVPKLSSKAP----PVPLPSADAPPIPVPSTAPPVPIPTS 1048 Score = 28.3 bits (60), Expect = 1.1 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +3 Query: 468 PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPCPSTKDTHSPTPS 605 PP +P P P VPP S P A + P P P+ K P PS Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243 Score = 26.6 bits (56), Expect = 3.4 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%) Frame = +3 Query: 468 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTKDTHSPTPS 605 PP PS +P VPPV P+ P P PS P PS Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137 Score = 25.8 bits (54), Expect = 6.0 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = +3 Query: 468 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPS 605 PP +PS +P VPPV P+ P P PS P PS Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214 >SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1666 Score = 31.9 bits (69), Expect = 0.091 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%) Frame = +2 Query: 347 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 490 +Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451 >SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr 1|||Manual Length = 1517 Score = 31.1 bits (67), Expect = 0.16 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +2 Query: 146 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 289 G+ PRA F ++ P H G+++ M KD G+E S +G + + P Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547 >SPCC18.03 |||shuttle craft like transcriptional regulator|Schizosaccharomyces pombe|chr 3|||Manual Length = 1077 Score = 29.5 bits (63), Expect = 0.48 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = +3 Query: 492 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 596 PC+ + PPV+C TP P C K H P Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655 >SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1016 Score = 28.7 bits (61), Expect = 0.85 Identities = 20/67 (29%), Positives = 32/67 (47%) Frame = +3 Query: 474 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTSWK 653 C +PS+ C + PV + T S TP P+T + +PTP+ T T+Q+T + Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTST--TTTAQSTGMQ 879 Query: 654 ILTERGY 674 + Y Sbjct: 880 LCGSNYY 886 Score = 25.4 bits (53), Expect = 7.9 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +3 Query: 474 CTSPSK-PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTSW 650 C +PS+ CS + + P T AT + TP P+T T +PT + + V ++W Sbjct: 914 CYNPSQYVCSDGS--LSPNTVTTTKATTTFTPTPTTTTTPTPTTTSATSTNVIAQCGSAW 971 >SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizosaccharomyces pombe|chr 1|||Manual Length = 927 Score = 28.3 bits (60), Expect = 1.1 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -2 Query: 254 VPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 165 + L+ K+PS PY SRP A S TR Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335 >SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 731 Score = 27.9 bits (59), Expect = 1.5 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = +3 Query: 501 RCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTPSCVWT*PVATS 635 R P P V + A SP TP P K+T +P+ S P ATS Sbjct: 500 RVAVPSTPSVRSASRAMTSPRTPLPRVKNTQNPSRSISAEPPSATS 545 >SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual Length = 398 Score = 27.1 bits (57), Expect = 2.6 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +3 Query: 492 PCSRCTRPVVPPVSCWTPATVSPTPCPST 578 P SR T+P+ S +P VSP PST Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290 >SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1628 Score = 27.1 bits (57), Expect = 2.6 Identities = 21/86 (24%), Positives = 40/86 (46%) Frame = +1 Query: 403 SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRR 582 +PQ + E++ D++R++ +RH RR P +A + R H + R R ++ R Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR---QNGNVNR 1481 Query: 583 IRTPPRHPASGLSRSRPHRLPHGRSS 660 + ++ +SR R H S+ Sbjct: 1482 NPRVSNNNSTNVSRERSSEANHRTSN 1507 >SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual Length = 127 Score = 27.1 bits (57), Expect = 2.6 Identities = 23/60 (38%), Positives = 28/60 (46%) Frame = -3 Query: 283 FEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIVYY 104 F G +F CLI++IR +SH D EHG II C T L G I+YY Sbjct: 47 FAGLGIAFIYCLIAFIRE-MSHPSSR-------KDTMEHGL-PIILCST-LMLVGNILYY 96 >SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces pombe|chr 2|||Manual Length = 466 Score = 27.1 bits (57), Expect = 2.6 Identities = 12/36 (33%), Positives = 15/36 (41%) Frame = +3 Query: 468 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 575 PP P + T PV PV+ A P P P+ Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402 >SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual Length = 309 Score = 26.6 bits (56), Expect = 3.4 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = -1 Query: 246 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 130 S T +SF P+PT P LPT NT + P+ PAL Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101 >SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces pombe|chr 2|||Manual Length = 226 Score = 26.2 bits (55), Expect = 4.5 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +2 Query: 389 LLTEAPLNPKANREKMTQIMFETFN 463 +L APL+ + +KM +++FET+N Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205 >SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1316 Score = 26.2 bits (55), Expect = 4.5 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +1 Query: 604 PASGLSRSRPHRLPHGRSSPSAATRSLPPP 693 P S L S P ++ G++SP ++ S PP Sbjct: 1160 PISNLETSYPFKIEEGQASPLSSPLSKTPP 1189 >SPBP4G3.03 |||PI31 proteasome regulator related|Schizosaccharomyces pombe|chr 2|||Manual Length = 241 Score = 25.8 bits (54), Expect = 6.0 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +1 Query: 595 PRHPASGLSRSRPHRLPHGRSS 660 P++P + L++ PH LPH R++ Sbjct: 150 PKNPHAFLAQDLPHGLPHRRAA 171 >SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 194 Score = 25.8 bits (54), Expect = 6.0 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = +1 Query: 508 RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHGRS-SPS 666 R RS HR+ G RR P+R HL R RH + R R R SP+ Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHLSRHH---RHSTTNYHSKRDDRYERRREHSPN 190 >SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|Schizosaccharomyces pombe|chr 2|||Manual Length = 2337 Score = 25.8 bits (54), Expect = 6.0 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -3 Query: 283 FEGQDTSFALCLISYIRVLLSHTDHHA 203 +EG+DT+ +Y+R++L TD A Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100 >SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 668 Score = 25.8 bits (54), Expect = 6.0 Identities = 14/44 (31%), Positives = 16/44 (36%) Frame = +1 Query: 556 LPHRAHLRRIRTPPRHPASGLSRSRPHRLPHGRSSPSAATRSLP 687 LP R+H R PPR LP S S + S P Sbjct: 426 LPERSHKHRHSAPPRSKLISSKSEAGRALPGNTSGASISNTSSP 469 >SPAC14C4.12c |||SWIRM domain protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 297 Score = 25.8 bits (54), Expect = 6.0 Identities = 27/110 (24%), Positives = 39/110 (35%), Gaps = 3/110 (2%) Frame = +1 Query: 367 RPRGTPSPAH*G--SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRA- 537 R RG+P G +P +G P H + + ++A+ V Y Sbjct: 132 RKRGSPDTPDSGHSTPHSKGDVHPGMPQHNTRFKQSSREFSSNTQAIDVANTPYELLPDY 191 Query: 538 GLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHGRSSPSAATRSLP 687 L R+H R +R+ + P LS L H AAT LP Sbjct: 192 SPDMSVLDKRSHPRPLRSEWKGPPLDLSNDENRHLLHPAELQLAATLRLP 241 >SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosaccharomyces pombe|chr 2|||Manual Length = 663 Score = 25.8 bits (54), Expect = 6.0 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +3 Query: 489 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P-VATSQT 641 KP S+ TRP +P +T T S P P + + ++ P V++SQ+ Sbjct: 65 KPSSKATRPYIP---SYTRLTYSVPPLPIPPPSEQSLDTIIYRNPSVSSSQS 113 >SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1224 Score = 25.4 bits (53), Expect = 7.9 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Frame = +3 Query: 486 SKPCSRCTRPVVPPVSCWT---PATVSPTPCPSTKDTHSPTPSCVWT*PV 626 S+ S T P PP + T PA SP P + H PT S PV Sbjct: 899 SRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPV 948 >SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Schizosaccharomyces pombe|chr 1|||Manual Length = 1995 Score = 25.4 bits (53), Expect = 7.9 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +1 Query: 655 SSPSAATRSLPPPSG 699 ++PS RSLPPPSG Sbjct: 636 ATPSNPPRSLPPPSG 650 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,132,637 Number of Sequences: 5004 Number of extensions: 72741 Number of successful extensions: 284 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 227 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 270 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 323158234 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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