BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0917 (686 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_03_0040 + 11816056-11819069,11819837-11820428 33 0.21 02_01_0015 - 98311-98412,98635-98707,98830-98921,99139-99230,993... 33 0.21 04_03_0256 - 13564070-13564456,13564543-13565299,13565734-135665... 32 0.49 07_01_0588 + 4370771-4370983,4371069-4371167,4371268-4371399,437... 30 2.0 05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 30 2.0 11_06_0142 - 20564572-20565951 29 2.6 07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530,749... 29 2.6 06_03_1384 + 29786028-29786657,29788581-29788711,29788987-297890... 29 2.6 04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 29 2.6 03_05_0447 - 24421442-24422767 29 2.6 11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 29 3.5 10_08_1063 - 22628642-22628716,22628806-22629012,22629325-226294... 28 6.0 07_03_1160 - 24430240-24431268 28 6.0 05_07_0219 - 28474661-28475146,28475979-28476644 28 6.0 04_04_0437 + 25193263-25194627 28 6.0 04_03_0999 - 21600231-21600788,21600896-21601056,21601149-216012... 28 6.0 01_07_0257 - 42343493-42343528,42344215-42344271,42344272-423443... 28 6.0 09_04_0163 - 15249816-15249920,15250032-15250163,15250463-152506... 28 8.0 04_04_1057 - 30451759-30452523,30452627-30452701,30453180-304532... 28 8.0 04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249... 28 8.0 02_03_0175 + 15999507-15999839,16000126-16000407,16000736-16000831 28 8.0 02_02_0704 + 13095449-13095584,13095671-13095990,13096102-130964... 28 8.0 02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 28 8.0 01_01_1059 - 8356328-8356645,8357567-8357865,8358119-8358124,835... 28 8.0 >09_03_0040 + 11816056-11819069,11819837-11820428 Length = 1201 Score = 33.1 bits (72), Expect = 0.21 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = +1 Query: 451 PLPHRVPVQGD-GGQGLRHPVQPRGRAQGHVLPPHRHV--EGDPAAAHRRPLP 600 P P PV GD G +G+ V +G A+G + P R V G P AA P P Sbjct: 49 PPPPTAPVAGDDGSKGVEGVVANQGGAEGVAVSPDRSVPLSGGPTAASSLPPP 101 >02_01_0015 - 98311-98412,98635-98707,98830-98921,99139-99230, 99363-99432,99683-99781,100008-100093,100541-100655, 100853-100918,101064-101143,101226-101301,101915-102151, 102559-102590,102993-103047,103384-103498,104497-104579, 105182-105232,105740-105802,105945-106010,106144-106279, 106503-106591,106844-106964,107138-107340,107434-107820 Length = 862 Score = 33.1 bits (72), Expect = 0.21 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = +2 Query: 182 STLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 322 S LLD + E D +++PD+ + VF+++ +P+++D G K Sbjct: 103 SKLLDPKRGRTEVFDGFSSVFSPDSSQHDVFSQVMNPLVDDLLLGGK 149 >04_03_0256 - 13564070-13564456,13564543-13565299,13565734-13566535, 13566884-13566917 Length = 659 Score = 31.9 bits (69), Expect = 0.49 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Frame = -3 Query: 573 WVSFDMP----VRG*NVPLSSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRV 406 W SFD P V G ++ + + P + +Y ++ G+ GY S PQ Sbjct: 170 WQSFDHPTDALVPGQSLLQGMILKANTSPTNWTESKIYITILQDGVYGYVESTPPQLYYN 229 Query: 405 ETTNSPAGSRLPSVSTSPQFLGGCLSVFLK 316 ++ R+P+ T F GC S+F++ Sbjct: 230 YVVSTNKSKRVPTTVT---FTNGCFSIFVQ 256 >07_01_0588 + 4370771-4370983,4371069-4371167,4371268-4371399, 4372027-4372092,4372458-4372523,4372633-4372707, 4373423-4373653 Length = 293 Score = 29.9 bits (64), Expect = 2.0 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 6/54 (11%) Frame = +1 Query: 481 DGGQGLRHPVQPRGR------AQGHVLPPHRHVEGDPAAAHRRPLPVQGGRPLP 624 DGG+ R PVQ G A V PPH P H +P P +G P Sbjct: 67 DGGRTDRDPVQLAGLFAPVFGAAAGVQPPHLRAPPPPQVFHAQPKPGEGAMAAP 120 >05_07_0200 - 28368890-28369021,28369169-28369303,28369918-28369947, 28370019-28370093,28370222-28370333,28370440-28370621, 28370723-28370854,28372193-28373479 Length = 694 Score = 29.9 bits (64), Expect = 2.0 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +3 Query: 171 PHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPC 272 P PP A+ R SRT TPA+ S+ P+ PC Sbjct: 340 PAPPPPPPPAAKRTSRTSTPATTSS-SAPASGPC 372 >11_06_0142 - 20564572-20565951 Length = 459 Score = 29.5 bits (63), Expect = 2.6 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +3 Query: 186 PSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCL 287 P L S V R+W A + RR R+P P CL Sbjct: 31 PDLVHSGAVCRSWHSAFATFRRLGLRSPPHPPCL 64 >07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530, 7494860-7495235,7495904-7496017,7496282-7496454, 7496562-7496669,7497311-7497377,7497791-7497904, 7498121-7498257,7498727-7498813,7498962-7498986, 7499044-7499266,7499770-7499947,7500039-7500152, 7500249-7500380,7500488-7500588,7500720-7500933 Length = 839 Score = 29.5 bits (63), Expect = 2.6 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = +2 Query: 23 SARKAATMVDAATLEKLEAG-FSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 199 S K + + + +++ + G F K D S + K+ TRE+ D+ K + +LDC Sbjct: 94 SVWKGGMIKEYSKMDECKTGDFGKRPLIDDISTVCKWFTRELSDTTYGKNAQLAAKVLDC 153 Query: 200 I 202 + Sbjct: 154 V 154 >06_03_1384 + 29786028-29786657,29788581-29788711,29788987-29789028, 29789383-29789441,29789774-29790070,29790180-29790289, 29790966-29791070,29791201-29791263,29791766-29791933, 29792111-29792248 Length = 580 Score = 29.5 bits (63), Expect = 2.6 Identities = 23/69 (33%), Positives = 28/69 (40%) Frame = +1 Query: 424 PLARGVPLQPLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPV 603 P A G+P P + Q Q + P + RG G P H+ P A P P Sbjct: 28 PPANGLPSTPPRQQAQAQA---QQVGTP-RRRGSKSGSTTPGHQ----TPGVAWPSPYPS 79 Query: 604 QGGRPLPAG 630 G PLPAG Sbjct: 80 GGASPLPAG 88 >04_04_0465 + 25427065-25427113,25428099-25428227,25428387-25428479, 25428681-25428953,25429037-25429288,25429735-25430118, 25430243-25430483,25431986-25432736 Length = 723 Score = 29.5 bits (63), Expect = 2.6 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +1 Query: 451 PLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPVQ 606 P P P G+RHPV R + HV PP P+++ R+ P Q Sbjct: 48 PAPAPAPAPETHRPGIRHPVPRHHRKRPHVAPP----LPPPSSSERQVAPYQ 95 >03_05_0447 - 24421442-24422767 Length = 441 Score = 29.5 bits (63), Expect = 2.6 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +2 Query: 11 DGCSSARKAATMVDAATLEKLEAGFSKLQG-SDSK 112 DGC S+ ++ AA L +LEAG K G SD++ Sbjct: 63 DGCGSSGAGDALLAAAALARLEAGLRKRTGDSDAR 97 >11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 Length = 1055 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = -3 Query: 183 DPNEVFLFFRLSNTSLVRYFFSSDLE-SDPWSLLKPASNFSRVAASTIVAAFLA 25 D +++ L + LV YF+ SD SLL SNF+R+A+ + ++ F++ Sbjct: 139 DASKLALKHTRAGAPLVAYFWDKTFAWSDASSLLPFCSNFTRLASQSTMSGFVS 192 >10_08_1063 - 22628642-22628716,22628806-22629012,22629325-22629433, 22629547-22629657,22630466-22630513,22630636-22630713, 22632151-22632254,22632360-22632470,22632555-22632791 Length = 359 Score = 28.3 bits (60), Expect = 6.0 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +1 Query: 424 PLARGVPLQPLPHRVPVQGDGGQGLRHPVQP 516 P+ RG Q PH++ + D G G+++P P Sbjct: 322 PMQRGAGAQSHPHQLRRKADQGMGMQNPGYP 352 >07_03_1160 - 24430240-24431268 Length = 342 Score = 28.3 bits (60), Expect = 6.0 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 9/70 (12%) Frame = +1 Query: 442 PLQPLPHRVPVQGDGGQGLRHPVQ-PRGRAQGHV---LPPHRHVEG-----DPAAAHRRP 594 P+QP P + P G L +P Q P+ G +PP +G +P+ + P Sbjct: 101 PVQPCPDQPPQPKPDGPPLPNPNQPPQPNPNGPPKPDMPPMPKPDGLPNTYEPSRPDQPP 160 Query: 595 LPVQGGRPLP 624 P+ G PLP Sbjct: 161 QPISDGPPLP 170 >05_07_0219 - 28474661-28475146,28475979-28476644 Length = 383 Score = 28.3 bits (60), Expect = 6.0 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +3 Query: 171 PHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCL 287 PH PPS S+ + T T + T TP+ P S + L Sbjct: 86 PHPPPPSPATSSSRTATATATATPTSPTPTPPPTSATLL 124 >04_04_0437 + 25193263-25194627 Length = 454 Score = 28.3 bits (60), Expect = 6.0 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +2 Query: 161 NKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELF 286 N TS GS D I+ G N+D YAP+ S+ A F Sbjct: 365 NYFTSLGSCCWDLIKEGKLNVDRNCIPYAPNQRSHDECAAFF 406 >04_03_0999 - 21600231-21600788,21600896-21601056,21601149-21601241, 21601379-21601531,21601917-21601992,21602078-21602197, 21602348-21602597,21602917-21603008,21603408-21603581 Length = 558 Score = 28.3 bits (60), Expect = 6.0 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -3 Query: 429 ERPQRTRVETTNSPAGSRLPSVSTSPQFLGGCLSVF 322 +RP+ +RV T +R+P + +++ G LS F Sbjct: 36 KRPRSSRVAQTRPQPEARIPGTQSDSEYMSGQLSAF 71 >01_07_0257 - 42343493-42343528,42344215-42344271,42344272-42344316, 42344374-42344518,42344606-42344733,42344939-42345044, 42345113-42345189,42345264-42345361,42345945-42346058, 42346154-42346294,42346418-42346502,42346721-42346849 Length = 386 Score = 28.3 bits (60), Expect = 6.0 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +1 Query: 466 VPVQGDGGQGLRHPVQPRGRAQGHVL---PPHRHVEGDPAAAHRRP 594 +P Q QGLR + G H+ PP++ +E D AAA R P Sbjct: 279 IPSQYKATQGLRPLEKHAGHVASHLRILPPPNKVLENDNAAASRPP 324 >09_04_0163 - 15249816-15249920,15250032-15250163,15250463-15250629, 15251259-15251448,15252530-15252661,15253275-15253382, 15253513-15253608,15253702-15253809,15253917-15254089, 15255026-15255401,15255887-15256030,15256125-15256799, 15256917-15256982,15257082-15257249 Length = 879 Score = 27.9 bits (59), Expect = 8.0 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = +2 Query: 23 SARKAATMVDAATLEKLEAG-FSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 199 S K + + + +++ + G F K D S + K+ TRE D+ K + +LDC Sbjct: 326 SVWKGGMIKEYSKIDECKTGDFGKRPLIDDISTVCKWFTREHSDTTYGKNAQLAAKVLDC 385 Query: 200 I 202 + Sbjct: 386 V 386 >04_04_1057 - 30451759-30452523,30452627-30452701,30453180-30453254, 30453503-30453591,30454058-30454157,30454244-30454388, 30454609-30454658,30455033-30455114,30455200-30455282, 30455360-30455429,30455523-30455632,30455719-30455872, 30456639-30456796,30457338-30457517 Length = 711 Score = 27.9 bits (59), Expect = 8.0 Identities = 27/101 (26%), Positives = 43/101 (42%) Frame = -3 Query: 489 SSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTSPQFLGGCLSVFLKPL 310 +++++Y+ + G K SS R R ++ G RL ST P LG S F P Sbjct: 509 NAVNMYYSPLGPGFKQIESSP-DVRLRPRFSHD-RGIRLSPGSTGPMSLGASPSQFTPPN 566 Query: 309 W*SSMIGSNSSANTEYDSASGA*IPTPESKFSTPDWMQSRR 187 + + +++ + ASG +P K TP RR Sbjct: 567 YQMQIPSNSTGMHGSGSPASGGIHGSPLGK--TPSSYSKRR 605 >04_04_0779 - 28023735-28024058,28024520-28024618,28024704-28024940, 28025227-28025334,28025427-28025486,28025813-28025888, 28025984-28026144,28026374-28026436,28026543-28026630, 28026872-28027612,28027695-28028239 Length = 833 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = +1 Query: 505 PVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLP 600 P+ PR P +RH +G H+ PLP Sbjct: 339 PLHPRSGGMAPESPTNRHDDGKKKQTHKLPLP 370 >02_03_0175 + 15999507-15999839,16000126-16000407,16000736-16000831 Length = 236 Score = 27.9 bits (59), Expect = 8.0 Identities = 17/49 (34%), Positives = 21/49 (42%) Frame = +1 Query: 484 GGQGLRHPVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPVQGGRPLPAG 630 GG G VQ R + + HRH +PA + V GRP AG Sbjct: 139 GGNGSGGAVQDNDRVERQAVAGHRHRHDNPACGSQ---VVGDGRPSAAG 184 >02_02_0704 + 13095449-13095584,13095671-13095990,13096102-13096423, 13096556-13096632,13096744-13097127 Length = 412 Score = 27.9 bits (59), Expect = 8.0 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -3 Query: 237 PTPESKFSTPDWMQS 193 P PE+K TPDW+QS Sbjct: 117 PPPEAKKVTPDWLQS 131 >02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814, 1767414-1767560,1767635-1767800,1767907-1767973, 1772850-1772949,1773029-1773099,1773199-1773382, 1773784-1773929,1774484-1774663,1774737-1774824, 1775634-1775838,1775945-1776081,1776529-1776612, 1776718-1776894,1777050-1777194,1777642-1777763, 1777846-1778091,1778571-1778789,1779016-1779094, 1779178-1779257,1779291-1779320 Length = 1053 Score = 27.9 bits (59), Expect = 8.0 Identities = 23/87 (26%), Positives = 39/87 (44%) Frame = -2 Query: 436 LERAAAAHAGGDHELAGGVEVAERVHVSPVLGRVLVGLLEAIVVVLDDRVKQLGEHGVRL 257 LER A GD ++ V + ++ + R G+ V + V+ G HG + Sbjct: 830 LERRRAELDAGDQKIRELVSILDQ-RKDESIERTFKGVARHFREVFSELVQ--GGHGHLV 886 Query: 256 GVRRVDTDAGVQVLDTRLDAVKEGGSE 176 +++ D DAG + +D D +E SE Sbjct: 887 MMKKKDGDAGDEDIDNDEDGPREPDSE 913 >01_01_1059 - 8356328-8356645,8357567-8357865,8358119-8358124, 8358276-8358720,8359722-8360036 Length = 460 Score = 27.9 bits (59), Expect = 8.0 Identities = 15/53 (28%), Positives = 21/53 (39%) Frame = +3 Query: 123 RSTLPGKYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPS 281 RS G Y+ R H D P + + +R R S++PC PS Sbjct: 224 RSQSKGYYNERPLDGRSHDDMPKFSKESPQARASANYGAKGRPAQSKSPCQPS 276 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,193,453 Number of Sequences: 37544 Number of extensions: 422081 Number of successful extensions: 1962 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1865 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1959 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1744894544 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -