Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0916
         (442 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   0.97 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   1.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   2.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   6.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   9.1  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 0.97
 Identities = 15/66 (22%), Positives = 28/66 (42%)
 Frame = +3

Query: 54  NFYPPLSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF 233
           +F P  S+  + +  +  D + K+ V N G N        +  ++    N W+ RN    
Sbjct: 463 DFQPRGSVFVRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDM 522

Query: 234 AFVEFE 251
            F+E +
Sbjct: 523 -FIELD 527


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -1

Query: 226 GGFRATHTLRMLPYLENIFSISYLD--ALVPKLPTYTLQ 116
           G F+A + L  L  L N+ S  Y D  AL P L    L+
Sbjct: 206 GAFKAENLLVTLTVLPNVNSTVYYDPRALSPNLEFVVLE 244


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 396 SMIGGGDYDCVTC 358
           S++  G+Y CVTC
Sbjct: 864 SIVSLGEYKCVTC 876


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -1

Query: 217 RATHTLRMLPYLENIFSISYLDALVP 140
           R+TH+++   YL+ + + ++   L P
Sbjct: 12  RSTHSMKNFKYLKVLVTFAHFICLFP 37


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 144  YPSCPRTLCKKDP 106
            YP C +  CKK P
Sbjct: 1521 YPKCWQVDCKKGP 1533


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 51  NNFYPPLSIKTKMSRYREWD 110
           N+FYP    K +++    WD
Sbjct: 11  NDFYPIEKTKAQLANKELWD 30


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 324 RHESWCHSS 298
           +H SWC SS
Sbjct: 231 QHRSWCSSS 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,992
Number of Sequences: 336
Number of extensions: 1900
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)