BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0916 (442 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 0.85 DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 0.85 U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 1.5 AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 1.5 AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 2.6 AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 2.6 AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 2.6 AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 4.5 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 7.9 >DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 23.8 bits (49), Expect = 0.85 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = -1 Query: 220 FRATHTLRMLPYLENIFSISYLDALVPKLPTYTLQERSHS 101 FR+ T +M P+++ +F LV + P Y + +S Sbjct: 333 FRSPQTHKMAPWVKRVFIHILPRLLVMRRPQYKFETNRYS 372 >DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 23.8 bits (49), Expect = 0.85 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = -1 Query: 220 FRATHTLRMLPYLENIFSISYLDALVPKLPTYTLQERSHS 101 FR+ T +M P+++ +F LV + P Y + +S Sbjct: 333 FRSPQTHKMAPWVKRVFIHILPRLLVMRRPQYKFETNRYS 372 >U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive opsin protein. Length = 377 Score = 23.0 bits (47), Expect = 1.5 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +3 Query: 63 PPLSIKTKMSRYREWDLSCKVY 128 P L I + M R W++ C VY Sbjct: 111 PMLVISSFMERMIGWEIGCDVY 132 >AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin protein. Length = 377 Score = 23.0 bits (47), Expect = 1.5 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +3 Query: 63 PPLSIKTKMSRYREWDLSCKVY 128 P L I + M R W++ C VY Sbjct: 111 PMLVISSFMERMIGWEIGCDVY 132 >AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform C protein. Length = 548 Score = 22.2 bits (45), Expect = 2.6 Identities = 9/35 (25%), Positives = 19/35 (54%) Frame = -2 Query: 435 LKATVVETLTGRESMIGGGDYDCVTCCGLSLCDHL 331 +K TVV + + ++G ++ CV C + + +L Sbjct: 321 IKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYL 355 >AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform B protein. Length = 463 Score = 22.2 bits (45), Expect = 2.6 Identities = 9/35 (25%), Positives = 19/35 (54%) Frame = -2 Query: 435 LKATVVETLTGRESMIGGGDYDCVTCCGLSLCDHL 331 +K TVV + + ++G ++ CV C + + +L Sbjct: 236 IKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYL 270 >AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform A protein. Length = 782 Score = 22.2 bits (45), Expect = 2.6 Identities = 9/35 (25%), Positives = 19/35 (54%) Frame = -2 Query: 435 LKATVVETLTGRESMIGGGDYDCVTCCGLSLCDHL 331 +K TVV + + ++G ++ CV C + + +L Sbjct: 555 IKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYL 589 >AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor protein. Length = 405 Score = 21.4 bits (43), Expect = 4.5 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +1 Query: 118 AKCTWATWVLMRLNMK 165 +KCTW R+N+K Sbjct: 68 SKCTWTITSYHRINLK 83 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 20.6 bits (41), Expect = 7.9 Identities = 10/22 (45%), Positives = 10/22 (45%) Frame = +1 Query: 364 HAVVVPAADHTLAAGQCLHDGR 429 HA P TLA G C H R Sbjct: 520 HASSAPLLAATLAGGLCPHRRR 541 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 112,064 Number of Sequences: 438 Number of extensions: 2037 Number of successful extensions: 21 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 21 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 11450997 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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