BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0914 (680 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock p... 116 9e-28 DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 30 0.078 AY748839-1|AAV28187.1| 169|Anopheles gambiae cytochrome P450 pr... 25 1.7 AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 25 2.9 AY745209-1|AAU93476.1| 167|Anopheles gambiae cytochrome P450 pr... 23 6.7 >AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock protein protein. Length = 133 Score = 116 bits (278), Expect = 9e-28 Identities = 57/126 (45%), Positives = 75/126 (59%) Frame = +3 Query: 156 DVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 335 D GS++ + KDKFQ+NLDVQ F+PEEISVK D ++V Y+SR FVRRY Sbjct: 3 DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62 Query: 336 ALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKDQSEEANE 515 LP+G + S LSSDG+LTIT PRK + ER +PI TG K++ ++ N Sbjct: 63 MLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQVTGKAAPENG 122 Query: 516 KEK*KG 533 K +G Sbjct: 123 HSKKEG 128 >DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. Length = 889 Score = 29.9 bits (64), Expect = 0.078 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = +1 Query: 364 LWNRDCHQTGYSPSLRRGRCPTPSRERERCPSHRPVPFARRSRTRAKKP 510 LW ++C SP R +P S P P RS T AKKP Sbjct: 341 LWMKNCKSCSISPVSDRSESVSPVPSLPVRSSPEPSPVLLRSPTPAKKP 389 Score = 23.0 bits (47), Expect = 8.9 Identities = 10/30 (33%), Positives = 14/30 (46%) Frame = +1 Query: 424 PTPSRERERCPSHRPVPFARRSRTRAKKPT 513 P+P R+R HRP S + K+ T Sbjct: 413 PSPKSSRKRRTGHRPPAGMNASMSSGKRST 442 >AY748839-1|AAV28187.1| 169|Anopheles gambiae cytochrome P450 protein. Length = 169 Score = 25.4 bits (53), Expect = 1.7 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +3 Query: 24 RPRRLLDQHFGLALTPDDLLSVAAGPLL 107 RP R LD+H LAL D + AG L Sbjct: 114 RPERFLDEHGRLALAKDLSVPFGAGKRL 141 >AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase protein. Length = 1168 Score = 24.6 bits (51), Expect = 2.9 Identities = 13/35 (37%), Positives = 15/35 (42%) Frame = +1 Query: 424 PTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSR 528 P P R R PS R RR R + RR+ R Sbjct: 1108 PIPPRSRRLPPSPRTTEMRRRRRNYMQLQYRRRRR 1142 >AY745209-1|AAU93476.1| 167|Anopheles gambiae cytochrome P450 protein. Length = 167 Score = 23.4 bits (48), Expect = 6.7 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +2 Query: 494 PERRSQREGKVERFMKNFVYYKMAVPRETDSKYCIG 601 P R ++R ++ER KN ++ +P + CIG Sbjct: 82 PSRENERTLQIERVRKNIPHF---LPFSIGKRTCIG 114 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 642,715 Number of Sequences: 2352 Number of extensions: 12393 Number of successful extensions: 36 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 36 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 68577420 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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