Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0914
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   116   9e-28
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.078
AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450 pr...    25   1.7  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   2.9  
AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450 pr...    23   6.7  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  116 bits (278), Expect = 9e-28
 Identities = 57/126 (45%), Positives = 75/126 (59%)
 Frame = +3

Query: 156 DVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 335
           D GS++ + KDKFQ+NLDVQ F+PEEISVK  D  ++V            Y+SR FVRRY
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 336 ALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKDQSEEANE 515
            LP+G     + S LSSDG+LTIT PRK  +    ER +PI  TG   K++  ++   N 
Sbjct: 63  MLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQVTGKAAPENG 122

Query: 516 KEK*KG 533
             K +G
Sbjct: 123 HSKKEG 128


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.9 bits (64), Expect = 0.078
 Identities = 17/49 (34%), Positives = 20/49 (40%)
 Frame = +1

Query: 364 LWNRDCHQTGYSPSLRRGRCPTPSRERERCPSHRPVPFARRSRTRAKKP 510
           LW ++C     SP   R    +P        S  P P   RS T AKKP
Sbjct: 341 LWMKNCKSCSISPVSDRSESVSPVPSLPVRSSPEPSPVLLRSPTPAKKP 389



 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 424 PTPSRERERCPSHRPVPFARRSRTRAKKPT 513
           P+P   R+R   HRP      S +  K+ T
Sbjct: 413 PSPKSSRKRRTGHRPPAGMNASMSSGKRST 442


>AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450
           protein.
          Length = 169

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 24  RPRRLLDQHFGLALTPDDLLSVAAGPLL 107
           RP R LD+H  LAL  D  +   AG  L
Sbjct: 114 RPERFLDEHGRLALAKDLSVPFGAGKRL 141


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +1

Query: 424  PTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSR 528
            P P R R   PS R     RR R   +   RR+ R
Sbjct: 1108 PIPPRSRRLPPSPRTTEMRRRRRNYMQLQYRRRRR 1142


>AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 494 PERRSQREGKVERFMKNFVYYKMAVPRETDSKYCIG 601
           P R ++R  ++ER  KN  ++   +P     + CIG
Sbjct: 82  PSRENERTLQIERVRKNIPHF---LPFSIGKRTCIG 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,715
Number of Sequences: 2352
Number of extensions: 12393
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)