Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0912
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.82 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.82 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.82 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.82 
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    23   3.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +3

Query: 456 VEYFPSAVFIVVDNKKMVQHLDSPAIKVHKYSDG 557
           +++ PSAV +++D  K  ++L +   ++H    G
Sbjct: 738 IDFQPSAVLLLIDLMKKNRNLGAACGRIHPVGSG 771


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +3

Query: 456 VEYFPSAVFIVVDNKKMVQHLDSPAIKVHKYSDG 557
           +++ PSAV +++D  K  ++L +   ++H    G
Sbjct: 738 IDFQPSAVLLLIDLMKKNRNLGAACGRIHPVGSG 771


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +3

Query: 456 VEYFPSAVFIVVDNKKMVQHLDSPAIKVHKYSDG 557
           +++ PSAV +++D  K  ++L +   ++H    G
Sbjct: 738 IDFQPSAVLLLIDLMKKNRNLGAACGRIHPVGSG 771


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +3

Query: 456 VEYFPSAVFIVVDNKKMVQHLDSPAIKVHKYSDG 557
           +++ PSAV +++D  K  ++L +   ++H    G
Sbjct: 738 IDFQPSAVLLLIDLMKKNRNLGAACGRIHPVGSG 771


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 671 VIVKVHKITLYTFLKKMRDSLEDV 600
           +++  HK    T L++MRD L D+
Sbjct: 10  MLIACHKDVQETILQEMRDVLGDI 33


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 648 HALHLFEEDARQSRGRMVIGKQLKIPLVSICHLNIY 541
           H+++L EED ++     + GK    P     HL  +
Sbjct: 237 HSINLLEEDNQKPNVCRICGKSYARPSTLKTHLRTH 272


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 280 IASTISKLWFLP 245
           +A+T +K WFLP
Sbjct: 102 VATTKTKAWFLP 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,078
Number of Sequences: 336
Number of extensions: 3385
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)