Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0912
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   2.4  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     24   4.1  
AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    23   9.5  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   9.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   9.5  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 10/26 (38%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
 Frame = +3

Query: 255 QSLDIVDAIPL-FH-HSHYVSPMAEV 326
           + +D++D +PL +H H+H+ SPM+ +
Sbjct: 444 RGMDLMDDMPLPYHDHNHHNSPMSPI 469


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +3

Query: 258 SLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAG 380
           +LD+ +  P+F+ S   S +  ++ T +  + Q+ N   +G
Sbjct: 588 NLDLANLDPVFNSSELRSVLGSLSTTDLNRLEQTANMQTSG 628


>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 396 ENFRDNIVERCPGLKIAEKIVEYFPSAVFIVVD 494
           +NFR + V  CPGL    +I    P  +  V++
Sbjct: 214 DNFRTSGVFICPGLLKLTRITSLPPELISFVME 246


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 246 HLP*SFRHQQEAHHSQHS 193
           HLP  ++ QQ+ H  +H+
Sbjct: 149 HLPQQYQQQQQQHQLEHN 166


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 207 GVLLADAGKTKEGGRNQSLDIVD 275
           GV L +AG T    RN+   IVD
Sbjct: 146 GVTLGNAGTTPTFNRNKRTSIVD 168


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,863
Number of Sequences: 2352
Number of extensions: 13702
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)