Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0912
(719 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein. 138 2e-32
BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein. 138 2e-32
BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein. 138 2e-32
BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein. 138 2e-32
BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein. 138 2e-32
AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein. 138 2e-32
AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein. 136 6e-32
BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open read... 134 4e-31
AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein. 132 9e-31
AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein pr... 69 1e-11
>BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein.
Length = 210
Score = 138 bits (334), Expect = 2e-32
Identities = 81/205 (39%), Positives = 112/205 (54%), Gaps = 8/205 (3%)
Frame = +3
Query: 126 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 287
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 288 FHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYF 467
FH + ++PM EVALT I++ + + VIAGYY A E +D + K+A +I E F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVASRIAEGF 119
Query: 468 PSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVF--QSPYVLETVSHLLQKGV 641
I+VDN K +P I V+++ + +WR R+ + P + LL
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRS 179
Query: 642 ERDLVDFDNYLDDQSQDWTNQGIEK 716
LVDFDN+LDD DWTN I K
Sbjct: 180 YETLVDFDNHLDDIRNDWTNPEINK 204
>BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 138 bits (334), Expect = 2e-32
Identities = 81/205 (39%), Positives = 112/205 (54%), Gaps = 8/205 (3%)
Frame = +3
Query: 126 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 287
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 288 FHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYF 467
FH + ++PM EVALT I++ + + VIAGYY A E +D + K+A +I E F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVASRIAEGF 119
Query: 468 PSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVF--QSPYVLETVSHLLQKGV 641
I+VDN K +P I V+++ + +WR R+ + P + LL
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRS 179
Query: 642 ERDLVDFDNYLDDQSQDWTNQGIEK 716
LVDFDN+LDD DWTN I K
Sbjct: 180 YETLVDFDNHLDDIRNDWTNPEINK 204
>BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 138 bits (334), Expect = 2e-32
Identities = 81/205 (39%), Positives = 112/205 (54%), Gaps = 8/205 (3%)
Frame = +3
Query: 126 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 287
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 288 FHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYF 467
FH + ++PM EVALT I++ + + VIAGYY A E +D + K+A +I E F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVASRIAEGF 119
Query: 468 PSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVF--QSPYVLETVSHLLQKGV 641
I+VDN K +P I V+++ + +WR R+ + P + LL
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRS 179
Query: 642 ERDLVDFDNYLDDQSQDWTNQGIEK 716
LVDFDN+LDD DWTN I K
Sbjct: 180 YETLVDFDNHLDDIRNDWTNPEINK 204
>BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 138 bits (334), Expect = 2e-32
Identities = 81/205 (39%), Positives = 112/205 (54%), Gaps = 8/205 (3%)
Frame = +3
Query: 126 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 287
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 288 FHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYF 467
FH + ++PM EVALT I++ + + VIAGYY A E +D + K+A +I E F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVASRIAEGF 119
Query: 468 PSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVF--QSPYVLETVSHLLQKGV 641
I+VDN K +P I V+++ + +WR R+ + P + LL
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRS 179
Query: 642 ERDLVDFDNYLDDQSQDWTNQGIEK 716
LVDFDN+LDD DWTN I K
Sbjct: 180 YETLVDFDNHLDDIRNDWTNPEINK 204
>BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 138 bits (334), Expect = 2e-32
Identities = 81/205 (39%), Positives = 112/205 (54%), Gaps = 8/205 (3%)
Frame = +3
Query: 126 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 287
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 288 FHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYF 467
FH + ++PM EVALT I++ + + VIAGYY A E +D + K+A +I E F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVASRIAEGF 119
Query: 468 PSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVF--QSPYVLETVSHLLQKGV 641
I+VDN K +P I V+++ + +WR R+ + P + LL
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRS 179
Query: 642 ERDLVDFDNYLDDQSQDWTNQGIEK 716
LVDFDN+LDD DWTN I K
Sbjct: 180 YETLVDFDNHLDDIRNDWTNPEINK 204
>AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein.
Length = 210
Score = 138 bits (334), Expect = 2e-32
Identities = 81/205 (39%), Positives = 112/205 (54%), Gaps = 8/205 (3%)
Frame = +3
Query: 126 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 287
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 288 FHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYF 467
FH + ++PM EVALT I++ + + VIAGYY A E +D + K+A +I E F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVASRIAEGF 119
Query: 468 PSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVF--QSPYVLETVSHLLQKGV 641
I+VDN K +P I V+++ + +WR R+ + P + LL
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRS 179
Query: 642 ERDLVDFDNYLDDQSQDWTNQGIEK 716
LVDFDN+LDD DWTN I K
Sbjct: 180 YETLVDFDNHLDDIRNDWTNPEINK 204
>AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 136 bits (330), Expect = 6e-32
Identities = 83/198 (41%), Positives = 113/198 (57%), Gaps = 5/198 (2%)
Frame = +3
Query: 126 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 305
M EV I AY K+ LHAA+YPH AVNG+ LA A ++ EG L + D +PLFH
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGEG-----LCLTDCVPLFHSHLA 55
Query: 306 VSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPG---LKIAEKIVEYFPSA 476
+S M EVAL Q++ V+AGYY A N N ++ PG LKIA +I E+FP A
Sbjct: 56 LSVMLEVALNQVDVWGAQAGLVVAGYYHA--NAAVN--DQSPGPLALKIAGRIAEFFPDA 111
Query: 477 VFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVFQSPY--VLETVSHLLQKGVERD 650
V I++DN+K+V P + V + +W P++ +V + + V LL+ +
Sbjct: 112 VLIMLDNQKLVPQPRVPPVIVLENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDRAHQH 171
Query: 651 LVDFDNYLDDQSQDWTNQ 704
LVDFD +LDD QDWTNQ
Sbjct: 172 LVDFDCHLDDIRQDWTNQ 189
>BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open reading
frame 122 protein.
Length = 208
Score = 134 bits (323), Expect = 4e-31
Identities = 82/198 (41%), Positives = 112/198 (56%), Gaps = 5/198 (2%)
Frame = +3
Query: 126 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 305
M EV I AY K+ LHAA+YPH AVNG+ LA A ++ E L + D +PLFH
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGE-----CLCLTDCVPLFHSHLA 55
Query: 306 VSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPG---LKIAEKIVEYFPSA 476
+S M EVAL Q++ V+AGYY A N N ++ PG LKIA +I E+FP A
Sbjct: 56 LSVMLEVALNQVDVWGAQAGLVVAGYYHA--NAAVN--DQSPGPLALKIAGRIAEFFPDA 111
Query: 477 VFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVFQSPY--VLETVSHLLQKGVERD 650
V I++DN+K+V P + V + +W P++ +V + + V LL+ +
Sbjct: 112 VLIMLDNQKLVPQPRVPPVIVLENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDRAHQH 171
Query: 651 LVDFDNYLDDQSQDWTNQ 704
LVDFD +LDD QDWTNQ
Sbjct: 172 LVDFDCHLDDIRQDWTNQ 189
>AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 132 bits (320), Expect = 9e-31
Identities = 81/198 (40%), Positives = 110/198 (55%), Gaps = 5/198 (2%)
Frame = +3
Query: 126 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 305
M EV I Y K+ LHAA+YPH AVNG+ LA A G + L + D +PLFH
Sbjct: 1 MGEVEISGPGYVKMCLHAARYPHAAVNGLFLAPA-----TGSGECLCLTDCVPLFHSHLA 55
Query: 306 VSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPG---LKIAEKIVEYFPSA 476
+S M EVAL Q++ V+AGYY A N N ++ PG LKIA +I E+FP A
Sbjct: 56 LSVMLEVALNQVDVWGAQAGLVVAGYYHA--NAAVN--DQSPGPLALKIAGRIAEFFPDA 111
Query: 477 VFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVFQSPY--VLETVSHLLQKGVERD 650
V I++DN+K+V P + V + +W P++ +V + + V LL+ +
Sbjct: 112 VLIMLDNQKLVPQPRVPPVIVLENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDRAHQH 171
Query: 651 LVDFDNYLDDQSQDWTNQ 704
LVDFD +LDD QDWTNQ
Sbjct: 172 LVDFDCHLDDIRQDWTNQ 189
>AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein
protein.
Length = 77
Score = 69.3 bits (162), Expect = 1e-11
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +3
Query: 126 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 287
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 288 FHHSHYVSPMAEVALT 335
FH + ++PM EVALT
Sbjct: 61 FHGTLALAPMLEVALT 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,631,560
Number of Sequences: 237096
Number of extensions: 1948338
Number of successful extensions: 11439
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11411
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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