Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0912
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075566-1|AAL68373.2|  204|Drosophila melanogaster SD01117p pro...   185   6e-47
AE013599-3495|AAF46921.1|  203|Drosophila melanogaster CG3501-PA...   183   2e-46
AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB...    30   3.6  
BT010320-1|AAQ23638.1|  335|Drosophila melanogaster AT04665p pro...    29   4.8  
BT003289-1|AAO25049.1|  458|Drosophila melanogaster GM03563p pro...    29   4.8  
AE014296-498|AAF47674.1|  458|Drosophila melanogaster CG12186-PA...    29   4.8  
Y18278-2|CAC18800.1| 3347|Drosophila melanogaster AKAP550 protein.     29   6.4  
Y18278-1|CAC18799.1| 3554|Drosophila melanogaster AKAP550 protein.     29   6.4  
AY051596-1|AAK93020.1|  969|Drosophila melanogaster GH23814p pro...    29   6.4  
AE014298-711|AAN09135.1| 3522|Drosophila melanogaster CG6775-PB,...    29   6.4  
AE014298-710|AAF46011.2| 3584|Drosophila melanogaster CG6775-PA,...    29   6.4  
AE014298-705|ABI30968.1| 3719|Drosophila melanogaster CG6775-PC,...    29   6.4  
AY118687-1|AAM50547.1|  583|Drosophila melanogaster AT15352p pro...    29   8.4  
AE014296-2359|AAF49758.2|  583|Drosophila melanogaster CG8100-PA...    29   8.4  

>AY075566-1|AAL68373.2|  204|Drosophila melanogaster SD01117p
           protein.
          Length = 204

 Score =  185 bits (450), Expect = 6e-47
 Identities = 102/196 (52%), Positives = 130/196 (66%), Gaps = 3/196 (1%)
 Frame = +3

Query: 123 KMSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSH 302
           KM +  +   AYAK+I HAAKYPH AVNG+LLA+  KT +G +   ++IVDAIPLFH   
Sbjct: 1   KMCDYKVSERAYAKLIFHAAKYPHQAVNGLLLAE--KTSKGSQ---VEIVDAIPLFHQCL 55

Query: 303 YVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYFPSAVF 482
           YV+PMAEVAL  I+  A+ E  VIAGYYAA ENF DN V++ P  KIA+KI E F +A F
Sbjct: 56  YVTPMAEVALMLIDAHAEREGLVIAGYYAAPENFYDNQVDKTPAAKIADKIQENFKNACF 115

Query: 483 IVVDNKKMVQHLDSPAIKVHKY---SDGKWRPRESLIVFQSPYVLETVSHLLQKGVERDL 653
           +VVDNK M    D  AI+V      S  +W  +    + Q+   LE VS LL++G  RDL
Sbjct: 116 VVVDNKLMTLQHDRAAIQVFNCPGDSGARW-SKAKFTLSQASDTLEGVSLLLKRGAMRDL 174

Query: 654 VDFDNYLDDQSQDWTN 701
           VDFDN+LD+  ++WTN
Sbjct: 175 VDFDNHLDNPDKNWTN 190


>AE013599-3495|AAF46921.1|  203|Drosophila melanogaster CG3501-PA
           protein.
          Length = 203

 Score =  183 bits (445), Expect = 2e-46
 Identities = 101/195 (51%), Positives = 129/195 (66%), Gaps = 3/195 (1%)
 Frame = +3

Query: 126 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 305
           M +  +   AYAK+I HAAKYPH AVNG+LLA+  KT +G +   ++IVDAIPLFH   Y
Sbjct: 1   MCDYKVSERAYAKLIFHAAKYPHQAVNGLLLAE--KTSKGSQ---VEIVDAIPLFHQCLY 55

Query: 306 VSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAEKIVEYFPSAVFI 485
           V+PMAEVAL  I+  A+ E  VIAGYYAA ENF DN V++ P  KIA+KI E F +A F+
Sbjct: 56  VTPMAEVALMLIDAHAEREGLVIAGYYAAPENFYDNQVDKTPAAKIADKIQENFKNACFV 115

Query: 486 VVDNKKMVQHLDSPAIKVHKY---SDGKWRPRESLIVFQSPYVLETVSHLLQKGVERDLV 656
           VVDNK M    D  AI+V      S  +W  +    + Q+   LE VS LL++G  RDLV
Sbjct: 116 VVDNKLMTLQHDRAAIQVFNCPGDSGARW-SKAKFTLSQASDTLEGVSLLLKRGAMRDLV 174

Query: 657 DFDNYLDDQSQDWTN 701
           DFDN+LD+  ++WTN
Sbjct: 175 DFDNHLDNPDKNWTN 189


>AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB
            protein.
          Length = 2893

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +3

Query: 432  GLKIAEKIVEYFPSAVFIVVDNKKMV 509
            GLK A KI  YF +AVFI+  N K+V
Sbjct: 2195 GLKYALKIFNYFFTAVFILEANMKLV 2220


>BT010320-1|AAQ23638.1|  335|Drosophila melanogaster AT04665p
           protein.
          Length = 335

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +3

Query: 291 HHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIA 446
           H  HYVSP+ E  L Q  +   + N  +    A+C +   + ++   G+++A
Sbjct: 93  HEYHYVSPVGEDNLLQCSSCGFAGNSEVVKAPASCPSCNSSDLKEVRGVEVA 144


>BT003289-1|AAO25049.1|  458|Drosophila melanogaster GM03563p
           protein.
          Length = 458

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +3

Query: 291 HHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIA 446
           H  HYVSP+ E  L Q  +   + N  +    A+C +   + ++   G+++A
Sbjct: 216 HEYHYVSPVGEDNLLQCSSCGFAGNSEVVKAPASCPSCNSSDLKEVRGVEVA 267


>AE014296-498|AAF47674.1|  458|Drosophila melanogaster CG12186-PA
           protein.
          Length = 458

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +3

Query: 291 HHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIA 446
           H  HYVSP+ E  L Q  +   + N  +    A+C +   + ++   G+++A
Sbjct: 216 HEYHYVSPVGEDNLLQCSSCGFAGNSEVVKAPASCPSCNSSDLKEVRGVEVA 267


>Y18278-2|CAC18800.1| 3347|Drosophila melanogaster AKAP550 protein.
          Length = 3347

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 429  PGLKIAEKIVEYFPSAVFIVVDNKKM-VQHLDSPAIKVHKYSDGKWRPRESLIVFQSPYV 605
            PGL +A   V    + +F  VD +    Q +D   +K   +  GKW   E   +F   Y+
Sbjct: 2563 PGL-VAPGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDHLHGKWYFSEVRAIFSRRYL 2621

Query: 606  LETVS 620
            L+ V+
Sbjct: 2622 LQNVA 2626


>Y18278-1|CAC18799.1| 3554|Drosophila melanogaster AKAP550 protein.
          Length = 3554

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 429  PGLKIAEKIVEYFPSAVFIVVDNKKM-VQHLDSPAIKVHKYSDGKWRPRESLIVFQSPYV 605
            PGL +A   V    + +F  VD +    Q +D   +K   +  GKW   E   +F   Y+
Sbjct: 2770 PGL-VAPGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDHLHGKWYFSEVRAIFSRRYL 2828

Query: 606  LETVS 620
            L+ V+
Sbjct: 2829 LQNVA 2833


>AY051596-1|AAK93020.1|  969|Drosophila melanogaster GH23814p
           protein.
          Length = 969

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 429 PGLKIAEKIVEYFPSAVFIVVDNKKM-VQHLDSPAIKVHKYSDGKWRPRESLIVFQSPYV 605
           PGL +A   V    + +F  VD +    Q +D   +K   +  GKW   E   +F   Y+
Sbjct: 185 PGL-VAPGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDHLHGKWYFSEVRAIFSRRYL 243

Query: 606 LETVS 620
           L+ V+
Sbjct: 244 LQNVA 248


>AE014298-711|AAN09135.1| 3522|Drosophila melanogaster CG6775-PB,
            isoform B protein.
          Length = 3522

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 429  PGLKIAEKIVEYFPSAVFIVVDNKKM-VQHLDSPAIKVHKYSDGKWRPRESLIVFQSPYV 605
            PGL +A   V    + +F  VD +    Q +D   +K   +  GKW   E   +F   Y+
Sbjct: 2738 PGL-VAPGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDHLHGKWYFSEVRAIFSRRYL 2796

Query: 606  LETVS 620
            L+ V+
Sbjct: 2797 LQNVA 2801


>AE014298-710|AAF46011.2| 3584|Drosophila melanogaster CG6775-PA,
            isoform A protein.
          Length = 3584

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 429  PGLKIAEKIVEYFPSAVFIVVDNKKM-VQHLDSPAIKVHKYSDGKWRPRESLIVFQSPYV 605
            PGL +A   V    + +F  VD +    Q +D   +K   +  GKW   E   +F   Y+
Sbjct: 2800 PGL-VAPGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDHLHGKWYFSEVRAIFSRRYL 2858

Query: 606  LETVS 620
            L+ V+
Sbjct: 2859 LQNVA 2863


>AE014298-705|ABI30968.1| 3719|Drosophila melanogaster CG6775-PC,
            isoform C protein.
          Length = 3719

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 429  PGLKIAEKIVEYFPSAVFIVVDNKKM-VQHLDSPAIKVHKYSDGKWRPRESLIVFQSPYV 605
            PGL +A   V    + +F  VD +    Q +D   +K   +  GKW   E   +F   Y+
Sbjct: 2935 PGL-VAPGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDHLHGKWYFSEVRAIFSRRYL 2993

Query: 606  LETVS 620
            L+ V+
Sbjct: 2994 LQNVA 2998


>AY118687-1|AAM50547.1|  583|Drosophila melanogaster AT15352p
           protein.
          Length = 583

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 102 ALVSNNHKMSEVSIETGAYAKIILHAAKYPHCAVNG 209
           A+  NNH M  +SI  G      LH  +  + AVNG
Sbjct: 310 AVKHNNHAMDNLSIAGGIIGNNYLHICRQLNLAVNG 345


>AE014296-2359|AAF49758.2|  583|Drosophila melanogaster CG8100-PA
           protein.
          Length = 583

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 102 ALVSNNHKMSEVSIETGAYAKIILHAAKYPHCAVNG 209
           A+  NNH M  +SI  G      LH  +  + AVNG
Sbjct: 310 AVKHNNHAMDNLSIAGGIIGNNYLHICRQLNLAVNG 345


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,287,364
Number of Sequences: 53049
Number of extensions: 586469
Number of successful extensions: 1912
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1908
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)