Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0909
(668 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0247 + 8261735-8261873,8261932-8261975,8262100-8262224,826... 77 1e-14
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 40 0.002
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 36 0.039
12_02_0365 + 18045340-18045783 35 0.051
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175... 32 0.48
06_03_0846 - 25328224-25330613,25330716-25330794 31 0.63
04_03_0661 - 18468244-18469580,18469610-18469619 31 0.63
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 31 0.83
01_02_0049 + 10641363-10641563,10641640-10641750,10641893-106421... 31 0.83
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 31 1.1
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 31 1.1
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 30 1.5
04_01_0256 + 3402982-3402984,3403077-3403158,3403307-3403449,340... 30 1.5
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 30 1.9
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756... 30 1.9
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 30 1.9
07_03_0630 - 20097672-20097772,20097983-20102012 29 2.5
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 29 2.5
05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111 29 3.3
03_05_0035 + 20075691-20075695,20075720-20076326 29 3.3
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 29 4.4
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 29 4.4
04_04_1537 - 34235360-34235486,34236107-34236234,34236344-342364... 29 4.4
03_02_0031 + 5134889-5135021,5135109-5135179,5135267-5135428,513... 29 4.4
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 29 4.4
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 29 4.4
04_04_1379 + 33113374-33113529,33114046-33114143,33114811-331148... 28 5.9
02_03_0137 + 15624078-15624101,15624259-15624312,15624900-156249... 28 5.9
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726... 28 5.9
>02_02_0247 +
8261735-8261873,8261932-8261975,8262100-8262224,
8262331-8262391,8262434-8262442
Length = 125
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/82 (48%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Frame = +1
Query: 166 LDSQLNENKAVK-----EELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEI 330
L S +++N V+ +EL+L+ ++ VYKLIGPVLVKQDL EA+ NV KR+EYIS E+
Sbjct: 44 LPSHISKNHQVRKQYTIQELELVNDEANVYKLIGPVLVKQDLAEAKANVKKRIEYISAEL 103
Query: 331 KRTDDHICALENKQEALQENLN 396
KR D + LE KQ + +E+++
Sbjct: 104 KRMDRALKDLEEKQNSKKESVS 125
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/101 (24%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = +1
Query: 124 VQKDIKKAVTQKQQLDSQL-NENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVS 300
V+ +++K V + Q LD +L ++NK + E L++ + L L++ LE+ N
Sbjct: 882 VRSEMEKMVQKTQMLDQELEHKNKEISELQNSLQEQVQKCILAETSLLR--LEDLHTNSQ 939
Query: 301 KRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDIGKL 423
K + ++ +++R + + +EN + LQ +L+N I ++
Sbjct: 940 KEAKTLAHDLERLSEQLTEVENDRLDLQNISRELKNTISEI 980
Score = 31.1 bits (67), Expect = 0.83
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Frame = +1
Query: 133 DIKKAVTQKQQL--DSQLNENKAVKEELKLLRKDSEVYKLIGPVLVK-QDLEEARQNVSK 303
+I KA + ++L D + +K E + SE+ L V V+ Q+LE++R+ +
Sbjct: 485 EISKAHMELKKLSDDMAMEVDKLKCAESQNSAMQSELETLDQKVRVQEQELEQSRKEIES 544
Query: 304 RMEYISKEI---KRTDDHICALENKQEALQENLNKLRNDI 414
+ E+ K+ +D +C+LE + Q+ +N+L D+
Sbjct: 545 FHLSLQDEMAKRKQAEDALCSLEKQYAQSQKEINRLTLDM 584
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +1
Query: 127 QKDIKKAVTQKQQLDSQLNENKAVKEELK---LL---RKDSEVYKLIGPVLVKQDLEEAR 288
Q+++ + + ++L+ +LNE + V ELK LL +D+ V + ++ DLE
Sbjct: 1310 QEEVNRLTPEIERLNRKLNEVENVSCELKNTILLLNSERDTTVLQHKQALVRVSDLESEL 1369
Query: 289 QNVSKRMEYISKEIKRTDDHICALENKQEALQENLNK 399
+V + K ++ D + + ++LQ +LN+
Sbjct: 1370 SDVQAELVNAEKNVQILDKELKQKREEVDSLQASLNE 1406
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/107 (19%), Positives = 52/107 (48%)
Frame = +1
Query: 124 VQKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSK 303
+Q D K + +K+ ++Q+ E + L ++SE + ++ A + +
Sbjct: 2244 LQNDFSKLLDEKKYCETQVLILNEKLEMAQALAEESEAIATEAKQMAEERKTHAEEK-DE 2302
Query: 304 RMEYISKEIKRTDDHICALENKQEALQENLNKLRNDIGKLKLKA*KM 444
++ + + I+ + +CALENK + ++E + R +++L+ K+
Sbjct: 2303 EVKLLERSIEELETTVCALENKVDIIKEEAERQRMHREEIELELQKV 2349
>12_02_0365 + 18045340-18045783
Length = 147
Score = 35.1 bits (77), Expect = 0.051
Identities = 19/88 (21%), Positives = 49/88 (55%)
Frame = +1
Query: 124 VQKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSK 303
++ ++ + ++ +L+ +++E+ V ++ L Y++IG VLV++ ++E V +
Sbjct: 25 MRSEMNQLYSKITELEMEVSEHSLVIGAIEPLDPSRRCYRMIGGVLVERTIKEVLPAVQR 84
Query: 304 RMEYISKEIKRTDDHICALENKQEALQE 387
E + + + R ++ ALE K++ + E
Sbjct: 85 NKEGLEEVVARMNE---ALEKKKKEITE 109
>02_01_0266 -
1758439-1758599,1758682-1758769,1759363-1759564,
1759664-1759800,1760169-1760268,1760350-1760522,
1760797-1760941,1761018-1761139,1761225-1761470,
1761962-1762182,1762278-1762338,1762409-1762487,
1762572-1762651,1763221-1763292,1763382-1763449,
1763550-1763588,1763828-1763903,1763992-1764006
Length = 694
Score = 31.9 bits (69), Expect = 0.48
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Frame = +1
Query: 130 KDIKKAVTQKQQLDSQLNENKAV-----KEELKLLRKDSEVYKLIGPVLVKQDLEEARQN 294
KD++ + ++ S+L E V KEE ++ + + K + + KQ N
Sbjct: 324 KDLQSVRMESEKSKSELAEISKVHQAKLKEEEEISKSIMDREKRLSILYQKQGRATQFAN 383
Query: 295 VSKRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDIGKL 423
+ R +++ KEI + + + ++ LQE + KL+++I L
Sbjct: 384 KAARDKWLQKEIDDLERVLLSNRKQEGLLQEEIQKLKDEINNL 426
>06_03_0846 - 25328224-25330613,25330716-25330794
Length = 822
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 241 KLIGPVLVKQDLEEARQNVSKRM-EYISKEIKRTDDHICALENKQEAL 381
K I + QDL++A N K+ +YIS E T+ + +L+NK+ A+
Sbjct: 539 KYIAEPSLPQDLKDAFNNFQKQAKDYISSETAATEALLSSLKNKESAI 586
>04_03_0661 - 18468244-18469580,18469610-18469619
Length = 448
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +1
Query: 139 KKAVTQKQQLDSQLNENKAVKEELKLLRKD-SEVYKLIGPVLVKQDLEEARQNVSKRMEY 315
+K K+ ++ LN+ K ++E KLLRK+ + + L+ PV+ + + +V
Sbjct: 121 RKEEEAKRAAEAALNQKKLKEKEKKLLRKEKTRLRNLVAPVVAESHFSLSEDDVETACSS 180
Query: 316 ISKE-IKRTDDHICALENK 369
+ E +K+ D ++ENK
Sbjct: 181 LDMERLKKLCD---SMENK 196
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 31.1 bits (67), Expect = 0.83
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = +1
Query: 127 QKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSK- 303
Q I + V + QQL + K +++ +K L +D+ + + + KQ E ++ +++
Sbjct: 1370 QNKIMELVNESQQLQ---DIRKHLEDNIKRLEEDATTREAL-LISEKQTHEATKRTLTET 1425
Query: 304 --RMEYISKEIKRTDDHICALENKQEALQENLNKL 402
R E + +I+ +D H LE E LQEN + +
Sbjct: 1426 QLRNEELINKIQDSDKHALQLELTIERLQENASTM 1460
>01_02_0049 +
10641363-10641563,10641640-10641750,10641893-10642123,
10642253-10642357,10642546-10642704
Length = 268
Score = 31.1 bits (67), Expect = 0.83
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Frame = +1
Query: 130 KDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNV-SKR 306
KD K + K+QL +Q +EN+ E + + EV KL L +D E+ R ++ S
Sbjct: 46 KDAKIKLASKEQLLAQESENRKKFAESRARSMEEEVKKL-HKCLQDKD-EQLRTSICSTE 103
Query: 307 MEYISK---EIKRTDDHIC---ALENKQEALQENLNKLRNDIGKLKLKA*KMCELKVK 462
+Y+S +I R+ + A + + A+ L L G K+ + CEL+VK
Sbjct: 104 QQYLSSYKLDILRSQISVAQATAEASAESAMLARLQCLSLSGGHEKINSLGECELRVK 161
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = +1
Query: 205 ELKLLRKDSEVYKLIGPV-LVKQDLEEARQNVSKRMEYISKEI-KRTDDH--ICALENKQ 372
E +L + +++ K+ G V +++Q+L+ ++ V I E KR++ + A+ N
Sbjct: 708 ESELSKLQAQLEKIEGKVQMLEQELKHKKEEVDSLQISIQDEAHKRSEGEAALLAMTNLN 767
Query: 373 EALQENLNKLRNDIGKLKLK 432
QE +N+L + KLK+K
Sbjct: 768 SESQEEVNRLTLETKKLKVK 787
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +1
Query: 127 QKDIKKAVTQKQQLDSQLNEN-KAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSK 303
+KD +K K++ + NE K KEE + E +L+G +++ E+ +N +
Sbjct: 201 EKDNEKEKEDKEEETEKDNEKEKEDKEEETKKDNEKEKEQLMGTDEKEKEKEKEDENEEE 260
Query: 304 RMEYISKEIKRTDDHICALENKQEALQENLNKLRNDIGKLK 426
++E K+ K EN++E E + N+I K+K
Sbjct: 261 KLEEEEKKDKEEKLEEKEKENEEENGNEKDKENDNEIEKVK 301
>09_04_0151 - 15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 30.3 bits (65), Expect = 1.5
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +1
Query: 160 QQLDSQLNENKAVKEELKL---LRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEI 330
Q+L S L + E+ + L KDS + +L+ L K+ + + ++ K E I KE+
Sbjct: 773 QRLKSSLESCEKAMEDCNIQNELEKDSILSELL--TLQKEVVYLSSSSLMKEKESIRKEL 830
Query: 331 KRTDDHICALENK-QEALQENLNKLRND 411
RT + ENK + ++QE + KL ++
Sbjct: 831 DRTKTKLKETENKLKNSIQEKI-KLESE 857
>04_01_0256 +
3402982-3402984,3403077-3403158,3403307-3403449,
3403557-3403832,3404136-3404315
Length = 227
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/87 (24%), Positives = 48/87 (55%)
Frame = +1
Query: 127 QKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKR 306
+KD+++ QK+ LD +L E +EE K+L+ D + ++ L+ ++N++ +
Sbjct: 87 KKDLERMKRQKEDLDIKLREK---REEKKVLQADKTAAE-----EEQKRLKRDKENLNLK 138
Query: 307 MEYISKEIKRTDDHICALENKQEALQE 387
++ KE +R ++ L+ K + L++
Sbjct: 139 VDTKRKENRRLEEENKKLQRKIKDLEQ 165
>12_01_0445 -
3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +1
Query: 127 QKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKR 306
Q + A K+ L+ QL E L ++ K+ E + ++Q EE + +
Sbjct: 647 QAEAVAACNAKESLEEQLYSANTEVERLHVIVKELE--DEVEKEKMRQ--EELVAELEMK 702
Query: 307 MEYISKEIKRT-DDHICALENKQEALQENLNKLRNDIGKLK 426
ME + IK + + +CA + E L + L NDI K K
Sbjct: 703 METAVEAIKESLEAQLCAANTEVERLNSIVQALENDIEKEK 743
>04_04_1509 - 34074206-34074398,34074506-34074777,34075411-34075608,
34076092-34076187,34076318-34076500,34076597-34076799,
34076887-34077013,34077098-34077292,34077400-34077540,
34077669-34077812,34077876-34078040,34078776-34078976,
34079049-34079195,34079275-34079427,34079731-34079833,
34079954-34080069,34080168-34080349,34080442-34080541,
34081200-34081527,34081605-34081834,34081979-34082110,
34082787-34082859,34083274-34083338
Length = 1248
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/100 (23%), Positives = 46/100 (46%)
Frame = +1
Query: 157 KQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEIKR 336
+Q+L+S+ + L L +++EV L + +L E + +V ++ + ++ +KR
Sbjct: 783 EQKLESRTRSLNVTESTLAL--RNAEVDTLQNSLKELDELREFKADVDRKNQQTAEILKR 840
Query: 337 TDDHICALENKQEALQENLNKLRNDIGKLKLKA*KMCELK 456
+ LEN + Q + N I +K K C L+
Sbjct: 841 QGAQLIELENLYKQEQVLRKRYYNTIEDMKGKIRVFCRLR 880
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 274 LEEARQNVSKRMEYISKEIKRTDDHICALENKQEALQ---ENLNKLRNDIGKLKLKA*KM 444
+EE+ + E + K+ K+ D LE ++ LQ +++ ++ ND+ KLK +
Sbjct: 601 VEESERKADLLNEELQKKTKQERDMQKELEGLRDTLQSERQSIKEVTNDLDKLK----SL 656
Query: 445 CELKVKHFYSSIM 483
C+ K +S+M
Sbjct: 657 CDEKDSSLQASLM 669
>03_02_0834 - 11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/95 (21%), Positives = 48/95 (50%)
Frame = +1
Query: 130 KDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRM 309
+D+ + Q+ Q + +K+ E+++L+K+ + + ++QD +E+ + ++
Sbjct: 748 QDVMQNEIQRVQDELCCLTHKSKHLEMQVLKKEENINQ------IQQDFQESSKELTALR 801
Query: 310 EYISKEIKRTDDHICALENKQEALQENLNKLRNDI 414
+ E K+ I AL+N +L++ + L DI
Sbjct: 802 CTLKTETKQLRKTISALQNDVASLKQKMKSLDEDI 836
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/88 (28%), Positives = 44/88 (50%)
Frame = +1
Query: 169 DSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEIKRTDDH 348
D NE + V++EL L S+ ++ VL K EE + + + SKE+
Sbjct: 749 DVMQNEIQRVQDELCCLTHKSKHLEM--QVLKK---EENINQIQQDFQESSKELTALR-- 801
Query: 349 ICALENKQEALQENLNKLRNDIGKLKLK 432
C L+ + + L++ ++ L+ND+ LK K
Sbjct: 802 -CTLKTETKQLRKTISALQNDVASLKQK 828
>07_03_0630 - 20097672-20097772,20097983-20102012
Length = 1376
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +1
Query: 196 VKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEIKRTDDHICALENKQE 375
V+++L+ LR DS P + QDL +A Q+ ++ + E+K D I + N
Sbjct: 44 VEDKLRFLRLDSLQRVKPAPAWL-QDLNKAAQDAKGLLDDMESEVKAPDSSISDVMNWLS 102
Query: 376 ALQENLNKLRNDIGKL 423
+ N+ ++ I KL
Sbjct: 103 SDDRNMIRMVYVISKL 118
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 29.5 bits (63), Expect = 2.5
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Frame = +1
Query: 121 GVQKDIKKAVTQKQ---QLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQ-----DL 276
G++ +++KA +Q +L+ + + + ++K R SE +L+G K L
Sbjct: 284 GLKLELEKANVAEQRAVELEGVVEQLEVEIADVKKARARSE--ELLGKWKTKALELEVRL 341
Query: 277 EEARQNVSKRMEYISKEIKRTDDHICALENKQ---EALQENLNKLRNDIGKLK 426
EEA Q+ + E + +K D + L+ K+ EALQ+ + L +++ K K
Sbjct: 342 EEADQSNILKGESLESAMKELDAKMTLLQEKESEIEALQDKVRSLEDEVAKQK 394
>05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111
Length = 677
Score = 29.1 bits (62), Expect = 3.3
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Frame = +1
Query: 139 KKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYI 318
+KA + ++ D N AVKEEL RK+ + +++ LV +L E + + ++
Sbjct: 245 EKASWRSKENDKVRNILDAVKEELNRERKNRQRAEIMNSKLV-SELSELKSAAKRYLQDY 303
Query: 319 SKEIKRTD--DHIC------ALENKQ--EALQENLNKLRNDIGKLKLKA*KMCEL 453
KE K + + +C E+K EAL+ K+R+++ + K K +M E+
Sbjct: 304 EKERKARELMEEVCDELAKEIAEDKAEVEALKSESMKMRDEVEEEK-KMLQMAEV 357
>03_05_0035 + 20075691-20075695,20075720-20076326
Length = 203
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +1
Query: 277 EEARQNVSKR-MEYISKEIKRTDDHICALENKQEAL----QENLNKLRNDIGKLKLK 432
EE ++++K + ++S+ + R DD LE +QEAL +E ++L+ ++ K + K
Sbjct: 147 EELFKSITKESLPHLSELLGRIDDQYATLERRQEALLIREKERSHELKGELAKEREK 203
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +1
Query: 178 LNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEIKRTDDHI 351
+NEN + E L L +KDS + + L + Q V E +SK IKR DHI
Sbjct: 659 VNENVPLSEILPL-QKDSTLASRALKFIQSMSLRDPLQPVGIIQECLSKCIKRQVDHI 715
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +1
Query: 157 KQQLDSQLNENKAVKEELKLL-RKDSEVYKLIGPVLVK-QDLEEARQNVSKRMEYISKEI 330
K+Q D + N K+ K++ K RKD + + + + K + LE+ + + +++ +KE+
Sbjct: 373 KRQEDLE-NNMKSCKDQFKEFERKDVKYREDLKHLKQKIKKLEDKTEKDTSKIDESTKEV 431
Query: 331 KRTDDHICALENKQEALQENLNKLRNDIGKLK 426
+ + I LE + LQE N+ + ++K
Sbjct: 432 EESSSLIPQLEEEIPKLQEKFNEEEKVLEQIK 463
>04_04_1537 -
34235360-34235486,34236107-34236234,34236344-34236483,
34236967-34237023,34237358-34237475,34237585-34237734,
34237857-34237941,34238040-34238104,34238351-34238500,
34238835-34238910,34239071-34239150
Length = 391
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 63 KHNGGRNTKKVSKTARIISRCSKRHKESGHSETTI--RQPVK*K*SSQRGTKT 215
KHN + K SKT +++HK S + TT+ R+P K S+ KT
Sbjct: 299 KHNSSHSKKGKSKTKECSCGSARKHKPSCNLATTVASREPPKTTAPSREPPKT 351
>03_02_0031 +
5134889-5135021,5135109-5135179,5135267-5135428,
5135786-5135891,5136385-5136429,5136850-5136946,
5137027-5137210,5137304-5137483,5137567-5137770
Length = 393
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +1
Query: 274 LEEARQNVSKRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDIGKLKLK 432
+ ++++N S +E + E+ DD + + + +++ LNK +IGKLK K
Sbjct: 18 IRKSQRNRSASVELVD-EVIALDDQWRQRQFELDKIRQELNKTSKEIGKLKAK 69
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +1
Query: 178 LNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEIKRTDDHI 351
+NEN + E L L +KDS + + L + Q V E +SK IKR DHI
Sbjct: 610 VNENVPLSEILPL-QKDSTLASRALKFIQSMSLRDPLQPVGIIQECLSKCIKRQVDHI 666
>02_01_0267 -
1766071-1766261,1766368-1766569,1766719-1766814,
1767414-1767560,1767635-1767800,1767907-1767973,
1772850-1772949,1773029-1773099,1773199-1773382,
1773784-1773929,1774484-1774663,1774737-1774824,
1775634-1775838,1775945-1776081,1776529-1776612,
1776718-1776894,1777050-1777194,1777642-1777763,
1777846-1778091,1778571-1778789,1779016-1779094,
1779178-1779257,1779291-1779320
Length = 1053
Score = 28.7 bits (61), Expect = 4.4
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +1
Query: 172 SQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEIKRTDDHI 351
S++++ K ++EE ++ + + K + + KQ N + R +++ KEI DD
Sbjct: 243 SKVHQTK-LREEEEISKSIMDRQKQLSILYQKQGRATQFANKAARDKWLQKEI---DDLE 298
Query: 352 CAL-ENKQEA--LQENLNKLRNDIGKL 423
C L N+++ LQE + KL++ I L
Sbjct: 299 CVLLSNRKQGGLLQEEIQKLKDKINNL 325
>04_04_1379 +
33113374-33113529,33114046-33114143,33114811-33114880,
33116668-33116800,33116981-33118940,33119016-33119076,
33119554-33120057
Length = 993
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/101 (21%), Positives = 48/101 (47%)
Frame = +1
Query: 121 GVQKDIKKAVTQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVS 300
G +K +A+ K QLD L++ A+++ + L + V + +L+K D + +
Sbjct: 153 GWEKAEGEAIAIKTQLDDTLDQKAAIEQRICHLDEALNVAMVERELLIK-DTAKLISHEQ 211
Query: 301 KRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDIGKL 423
++E + ++ + I +L+ + L E L+ I +L
Sbjct: 212 VKVERLEGDVVEKINIIASLDAENRKLSEMLSMKEKMISEL 252
>02_03_0137 +
15624078-15624101,15624259-15624312,15624900-15624954,
15625192-15625296,15625682-15625722,15626057-15626162,
15627010-15627016,15627134-15627218,15627315-15627428
Length = 196
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/91 (20%), Positives = 46/91 (50%)
Frame = +1
Query: 151 TQKQQLDSQLNENKAVKEELKLLRKDSEVYKLIGPVLVKQDLEEARQNVSKRMEYISKEI 330
TQ + + + EEL+ L ++ YK +G V + LE ++++ +++
Sbjct: 96 TQMRSKEGEKKRAYLTLEELRQLPDNTNTYKTVGKVFI---LEPKSLLLNEQ----EQKL 148
Query: 331 KRTDDHICALENKQEALQENLNKLRNDIGKL 423
++ I +++ +E L++ L ++ N+I +L
Sbjct: 149 NDSESAIASMQTSKEYLEKQLAEVENNIREL 179
>01_05_0344 +
21172101-21172233,21172332-21172402,21172492-21172653,
21172995-21173100,21174242-21174439,21174565-21174631,
21174868-21175051,21175145-21175324,21175408-21175587,
21176472-21176627,21177487-21178067,21178535-21178640,
21179152-21179331,21179620-21179892
Length = 858
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +1
Query: 274 LEEARQNVSKRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDIGKLKLK 432
+ +++N S +E + E+ DD + + + +++ LNK +IGKLK K
Sbjct: 18 IRRSQRNRSASVELVD-EVIALDDQWRQRQFELDKIRQELNKTSKEIGKLKAK 69
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,843,312
Number of Sequences: 37544
Number of extensions: 172950
Number of successful extensions: 582
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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