Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0905
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    26   1.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   3.2  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    25   3.2  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    25   3.2  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.6  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   5.6  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   5.6  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   7.4  

>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +1

Query: 544 RYVPIYKLLTLKDKLFFSITKISNVEYVI 630
           R VP+  +L L+++L++  T++S V+Y I
Sbjct: 158 RSVPVEHVLHLEEELYWFHTRVSLVDYSI 186


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 215 GCTMHPVIVTLFLRDCFGILNTD 283
           GC + P++ +LF+ D   +L  D
Sbjct: 675 GCVLSPLLFSLFINDVCNVLPPD 697


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 333 VFYSSFYCAI*ESLNDLSVLSIPKQSLRNSVTMTGCIV 220
           +  S FY    E +NDL  LS   ++ R+ V M+GC V
Sbjct: 207 IHLSRFYVRDLE-VNDLRYLSKETKACRDRVRMSGCDV 243


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 333 VFYSSFYCAI*ESLNDLSVLSIPKQSLRNSVTMTGCIV 220
           +  S FY    E +NDL  LS   ++ R+ V M+GC V
Sbjct: 207 IHLSRFYVRDLE-VNDLRYLSKETKACRDRVRMSGCDV 243


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 622 YVILKNDVLYYFVNLII 672
           Y+I++   L+Y VNLI+
Sbjct: 225 YIIIRRKTLFYTVNLIL 241


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 625 VILKNDVLYYFVNLII 672
           +I++   LYYF NLI+
Sbjct: 240 IIIRRRTLYYFFNLIV 255


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 155 VNVSLDADRFDPVLVRMRLSGC 220
           V V+L  DR+D +   M  SGC
Sbjct: 316 VLVALSIDRYDAITHPMNFSGC 337


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 625 VILKNDVLYYFVNLII 672
           ++++   LYYF NLI+
Sbjct: 208 ILIRRKTLYYFFNLIV 223


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,530
Number of Sequences: 2352
Number of extensions: 13722
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)