Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0904
(354 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 24 1.9
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 24 1.9
AY187040-1|AAO39754.1| 211|Anopheles gambiae putative antennal ... 23 3.4
AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein. 23 4.4
AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein. 23 4.4
AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein. 23 4.4
AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein. 23 4.4
U43499-1|AAA93302.1| 278|Anopheles gambiae a-emp protein. 22 5.9
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 22 5.9
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 22 7.8
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 22 7.8
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 299 AGGVRVRRWTRARCTSTR 352
AGG RRWTR+ T R
Sbjct: 110 AGGEPSRRWTRSGATGRR 127
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 299 AGGVRVRRWTRARCTSTR 352
AGG RRWTR+ T R
Sbjct: 110 AGGEPSRRWTRSGATGRR 127
>AY187040-1|AAO39754.1| 211|Anopheles gambiae putative antennal
carrier protein A5 protein.
Length = 211
Score = 23.0 bits (47), Expect = 3.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 149 ELSRGSKVSPTRKHGRSKSSPNMEPS 226
E+S G++++PT+ R K +EPS
Sbjct: 60 EVSLGNQLTPTQVKARPKLCWEVEPS 85
>AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 22.6 bits (46), Expect = 4.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 167 KVSPTRKHGRSKSSPNMEPSLNCLIY 244
++SP ++ SKSS PS N L Y
Sbjct: 144 EISPHHEYFDSKSSSETPPSYNQLNY 169
>AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 22.6 bits (46), Expect = 4.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 167 KVSPTRKHGRSKSSPNMEPSLNCLIY 244
++SP ++ SKSS PS N L Y
Sbjct: 144 EISPHHEYFDSKSSSETPPSYNQLNY 169
>AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 22.6 bits (46), Expect = 4.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 167 KVSPTRKHGRSKSSPNMEPSLNCLIY 244
++SP ++ SKSS PS N L Y
Sbjct: 144 EISPHHEYFDSKSSSETPPSYNQLNY 169
>AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 22.6 bits (46), Expect = 4.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 167 KVSPTRKHGRSKSSPNMEPSLNCLIY 244
++SP ++ SKSS PS N L Y
Sbjct: 144 EISPHHEYFDSKSSSETPPSYNQLNY 169
>U43499-1|AAA93302.1| 278|Anopheles gambiae a-emp protein.
Length = 278
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 306 PPAAPHALVNI 274
PP APH L N+
Sbjct: 245 PPCAPHGLFNV 255
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.2 bits (45), Expect = 5.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 103 VIYDYRVHGMVVFLQRALKRV 165
+IYDY +G V ++ + KRV
Sbjct: 2094 LIYDYNKNGEVKSIKESTKRV 2114
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 21.8 bits (44), Expect = 7.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -2
Query: 353 RVCSCSGPASSAALSRRPPHHTHL*ISDSASFTYVSNR*GSLVMAPYSVNSSIFHVSLSA 174
R+CS +G +S+ L P+HT S S + S + +P S +S++ + ++
Sbjct: 236 RLCSSNGSSSATPLPLH-PYHTDSDCSTQDSTSAPSPATYGDIASPSSASSAMTTPATTS 294
Query: 173 RP 168
P
Sbjct: 295 SP 296
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 21.8 bits (44), Expect = 7.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -2
Query: 353 RVCSCSGPASSAALSRRPPHHTHL*ISDSASFTYVSNR*GSLVMAPYSVNSSIFHVSLSA 174
R+CS +G +S+ L P+HT S S + S + +P S +S++ + ++
Sbjct: 236 RLCSSNGSSSATPLPLH-PYHTDSDCSTQDSTSAPSPATYGDIASPSSASSAMTTPATTS 294
Query: 173 RP 168
P
Sbjct: 295 SP 296
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,478
Number of Sequences: 2352
Number of extensions: 6011
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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