Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0904
(354 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor prot... 33 0.33
AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein. 33 0.33
DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein. 29 5.4
BC065477-1|AAH65477.1| 285|Homo sapiens SAMD1 protein protein. 29 5.4
BC030129-1|AAH30129.1| 295|Homo sapiens SAMD1 protein protein. 29 5.4
AY590151-1|AAT01278.1| 534|Homo sapiens prostate cancer antigen... 29 5.4
AY453840-1|AAR24087.1| 538|Homo sapiens atherin protein. 29 5.4
AK025632-1|BAB15196.1| 720|Homo sapiens protein ( Homo sapiens ... 29 5.4
BC005376-1|AAH05376.1| 498|Homo sapiens myotilin protein. 28 7.2
AF144477-1|AAD44754.1| 498|Homo sapiens myotilin protein. 28 7.2
AF133820-1|AAD29051.2| 498|Homo sapiens titin-like protein prot... 28 7.2
AF231919-1|AAF72943.1| 2248|Homo sapiens C21orf108 protein. 28 9.5
AB011111-1|BAA25465.2| 2046|Homo sapiens KIAA0539 protein protein. 28 9.5
>AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor protein.
Length = 2850
Score = 32.7 bits (71), Expect = 0.33
Identities = 23/88 (26%), Positives = 31/88 (35%)
Frame = +3
Query: 21 QSAAPQGSLRVSAEIGSALTATEHSGARDIRLPRARHGRVPPASSQEGQRSRRQGNMEDR 200
+S + Q S E GS ++H A + RHG SS GQ G
Sbjct: 808 ESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSSGQHDSSSGQSSSY 867
Query: 201 RVHRIWSHH*TASSIRDVREGGAVGYSQ 284
H SHH + G + G+ Q
Sbjct: 868 GQHESASHHASGRGRHGSGSGQSPGHGQ 895
>AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein.
Length = 2850
Score = 32.7 bits (71), Expect = 0.33
Identities = 23/88 (26%), Positives = 31/88 (35%)
Frame = +3
Query: 21 QSAAPQGSLRVSAEIGSALTATEHSGARDIRLPRARHGRVPPASSQEGQRSRRQGNMEDR 200
+S + Q S E GS ++H A + RHG SS GQ G
Sbjct: 808 ESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSSGQHDSSSGQSSSY 867
Query: 201 RVHRIWSHH*TASSIRDVREGGAVGYSQ 284
H SHH + G + G+ Q
Sbjct: 868 GQHESASHHASGRGRHGSGSGQSPGHGQ 895
>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
Length = 2479
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 55 LLKLDLPSQPLSIVERVIYDYRVHGMVVFLQRALKRVKGLADKETWKIEEFT 210
L +L+ + L +E + DY V+ Q++L + L++KETWK E T
Sbjct: 788 LQELENKEKKLKNLEDSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKT 839
>BC065477-1|AAH65477.1| 285|Homo sapiens SAMD1 protein protein.
Length = 285
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 36 QGSLRVSAEIGSALTATEHSGARDIRLPRA-RHGRVPPASSQEGQRSRRQG 185
QG L A L T GA + LPR R GR PPA+S RS+R G
Sbjct: 21 QGLLEEEAAARGRLERTR-LGA--LALPRGDRPGRAPPAASARPSRSKRGG 68
>BC030129-1|AAH30129.1| 295|Homo sapiens SAMD1 protein protein.
Length = 295
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 36 QGSLRVSAEIGSALTATEHSGARDIRLPRA-RHGRVPPASSQEGQRSRRQG 185
QG L A L T GA + LPR R GR PPA+S RS+R G
Sbjct: 31 QGLLEEEAAARGRLERTR-LGA--LALPRGDRPGRAPPAASARPSRSKRGG 78
>AY590151-1|AAT01278.1| 534|Homo sapiens prostate cancer antigen
T21 protein.
Length = 534
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 55 LLKLDLPSQPLSIVERVIYDYRVHGMVVFLQRALKRVKGLADKETWKIEEFT 210
L +L+ + L +E + DY V+ Q++L + L++KETWK E T
Sbjct: 218 LQELENKEKKLKNLEDSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKT 269
>AY453840-1|AAR24087.1| 538|Homo sapiens atherin protein.
Length = 538
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 36 QGSLRVSAEIGSALTATEHSGARDIRLPRA-RHGRVPPASSQEGQRSRRQG 185
QG L A L T GA + LPR R GR PPA+S RS+R G
Sbjct: 274 QGLLEEEAAARGRLERTR-LGA--LALPRGDRPGRAPPAASARPSRSKRGG 321
>AK025632-1|BAB15196.1| 720|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21979 fis, clone HEP06065. ).
Length = 720
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 55 LLKLDLPSQPLSIVERVIYDYRVHGMVVFLQRALKRVKGLADKETWKIEEFT 210
L +L+ + L +E + DY V+ Q++L + L++KETWK E T
Sbjct: 423 LQELENKEKKLKNLEDSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKT 474
>BC005376-1|AAH05376.1| 498|Homo sapiens myotilin protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 81 ATEHSGARDIRLPRARHGRVPPASSQEGQRSRRQGNMEDR 200
A + SGA+D + + H R+ +SQ RS +G++ D+
Sbjct: 201 AQDDSGAQDSQQHNSEHARLQVPTSQVRSRSTSRGDVNDQ 240
>AF144477-1|AAD44754.1| 498|Homo sapiens myotilin protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 81 ATEHSGARDIRLPRARHGRVPPASSQEGQRSRRQGNMEDR 200
A + SGA+D + + H R+ +SQ RS +G++ D+
Sbjct: 201 AQDDSGAQDSQQHNSEHARLQVPTSQVRSRSTSRGDVNDQ 240
>AF133820-1|AAD29051.2| 498|Homo sapiens titin-like protein
protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 81 ATEHSGARDIRLPRARHGRVPPASSQEGQRSRRQGNMEDR 200
A + SGA+D + + H R+ +SQ RS +G++ D+
Sbjct: 201 AQDDSGAQDSQQHNSEHARLQVPTSQVRSRSTSRGDVNDQ 240
>AF231919-1|AAF72943.1| 2248|Homo sapiens C21orf108 protein.
Length = 2248
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 136 VFLQRALKRVKGLADKETWKIEEFTEYGAITKLPHLLETYVKEALSDIHKCVW 294
V L+RALK V +KE W+ + + L + + L D++ VW
Sbjct: 438 VILKRALKTVDHCLNKEVWQESGVYTAVMMEEFVQLFREALSKILPDLNTVVW 490
>AB011111-1|BAA25465.2| 2046|Homo sapiens KIAA0539 protein protein.
Length = 2046
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 136 VFLQRALKRVKGLADKETWKIEEFTEYGAITKLPHLLETYVKEALSDIHKCVW 294
V L+RALK V +KE W+ + + L + + L D++ VW
Sbjct: 236 VILKRALKTVDHCLNKEVWQESGVYTAVMMEEFVQLFREALSKILPDLNTVVW 288
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,421,677
Number of Sequences: 237096
Number of extensions: 909578
Number of successful extensions: 3167
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3161
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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