Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0903
(505 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119636-1|AAM50290.1| 620|Drosophila melanogaster RE43020p pro... 31 1.2
AE014296-619|AAF47751.2| 594|Drosophila melanogaster CG12017-PA... 31 1.2
AF241795-1|AAF64049.1| 587|Drosophila melanogaster E protein tr... 29 2.7
AE014298-2089|AAF48412.1| 700|Drosophila melanogaster CG32594-P... 29 2.7
M63450-1|AAA29051.1| 3005|Drosophila melanogaster zinc-finger ho... 29 3.6
AY060681-1|AAL28229.1| 127|Drosophila melanogaster GH11902p pro... 29 3.6
AE014135-89|AAF59339.2| 3005|Drosophila melanogaster CG1449-PA p... 29 3.6
AY060905-1|AAL28453.1| 556|Drosophila melanogaster GM05229p pro... 29 4.7
AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA... 28 8.3
>AY119636-1|AAM50290.1| 620|Drosophila melanogaster RE43020p
protein.
Length = 620
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/94 (23%), Positives = 41/94 (43%)
Frame = +1
Query: 142 AVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGY 321
A +A N +D + E+ D+ ++D+R + SD + E D
Sbjct: 186 ASNAAEEEDNAEDEDADANNEED-DEEEEDDRDEEDDDSDSTAEQDQDQDHEPEAEADNE 244
Query: 322 DQTVDQRFDSPQSNGELDNLIMRPELYGEPPAME 423
D+ VD+ +P+S+ E +N P ++ PA +
Sbjct: 245 DEDVDEAVSAPESDNEKEN---TPSIFSGAPAAQ 275
>AE014296-619|AAF47751.2| 594|Drosophila melanogaster CG12017-PA
protein.
Length = 594
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/94 (23%), Positives = 41/94 (43%)
Frame = +1
Query: 142 AVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGY 321
A +A N +D + E+ D+ ++D+R + SD + E D
Sbjct: 186 ASNAAEEEDNAEDEDADANNEED-DEEEEDDRDEEDDDSDSTAEQDQDQDHEPEAEADNE 244
Query: 322 DQTVDQRFDSPQSNGELDNLIMRPELYGEPPAME 423
D+ VD+ +P+S+ E +N P ++ PA +
Sbjct: 245 DEDVDEAVSAPESDNEKEN---TPSIFSGAPAAQ 275
>AF241795-1|AAF64049.1| 587|Drosophila melanogaster E protein
transcript A protein.
Length = 587
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +1
Query: 112 FSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLA 291
++ TA+TA +P PS + EL + DD SL LN +
Sbjct: 493 YASTALTANATAPPLP-PSTDSSEPIYQELDQQ-RLIIDDKYSLPLNSDEDPPYSEPSNM 550
Query: 292 LSEEGNQDGYDQTVDQRFDSPQSN 363
+SE GN Y+ T ++ + S QSN
Sbjct: 551 MSEYGNDYNYNGT-NESYTSEQSN 573
>AE014298-2089|AAF48412.1| 700|Drosophila melanogaster CG32594-PB,
isoform B protein.
Length = 700
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +1
Query: 112 FSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLA 291
++ TA+TA +P PS + EL + DD SL LN +
Sbjct: 606 YASTALTANATAPPLP-PSTDSSEPIYQELDQQ-RLIIDDKYSLPLNSDEDPPYSEPSNM 663
Query: 292 LSEEGNQDGYDQTVDQRFDSPQSN 363
+SE GN Y+ T ++ + S QSN
Sbjct: 664 MSEYGNDYNYNGT-NESYTSEQSN 686
>M63450-1|AAA29051.1| 3005|Drosophila melanogaster zinc-finger
homeodomain protein 2 protein.
Length = 3005
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = +2
Query: 332 LTNASTH--HSPMENSIILS*G---LNFMANHRQWKDSLLHSTYNDVREEAAQK*AG 487
+TNA++H H+ ++S +++ G LN+ N K + H+ N+V E A+K AG
Sbjct: 2929 VTNATSHAIHTARQDSDVIAEGNCILNYDTNGGDSKSHVQHNLPNEVVSEDARKIAG 2985
>AY060681-1|AAL28229.1| 127|Drosophila melanogaster GH11902p
protein.
Length = 127
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = +2
Query: 332 LTNASTH--HSPMENSIILS*G---LNFMANHRQWKDSLLHSTYNDVREEAAQK*AG 487
+TNA++H H+ ++S +++ G LN+ N K + H+ N+V E A+K AG
Sbjct: 44 VTNATSHAIHTARQDSDVIAEGNCILNYDTNGGDSKSHVQHNLPNEVVSEDARKIAG 100
>AE014135-89|AAF59339.2| 3005|Drosophila melanogaster CG1449-PA
protein.
Length = 3005
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = +2
Query: 332 LTNASTH--HSPMENSIILS*G---LNFMANHRQWKDSLLHSTYNDVREEAAQK*AG 487
+TNA++H H+ ++S +++ G LN+ N K + H+ N+V E A+K AG
Sbjct: 2929 VTNATSHAIHTARQDSDVIAEGNCILNYDTNGGDSKSHVQHNLPNEVVSEDARKIAG 2985
>AY060905-1|AAL28453.1| 556|Drosophila melanogaster GM05229p
protein.
Length = 556
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +1
Query: 142 AVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLN---KSDKNDLEPYPLALSEEGNQ 312
A + P NN D + +N DD+ L+ ++D D EP SEE +Q
Sbjct: 268 AAQSAPATDNNDDDDDDDDQDKNDADDGDDDEFESLDQQFENDPEDTEPAKAVESEEQDQ 327
Query: 313 DGYDQ 327
D D+
Sbjct: 328 DQADE 332
>AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA
protein.
Length = 5106
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 178 DGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGN 309
DG + EN + DDN+ L L ++ LE Y L E GN
Sbjct: 2785 DGDVDALWIENMNSVMDDNKLLTLANGERIRLENYCALLFEVGN 2828
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,832,178
Number of Sequences: 53049
Number of extensions: 480016
Number of successful extensions: 1485
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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