Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0903
(505 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43330.1 68415.m05388 sugar transporter family protein simila... 31 0.44
At5g45060.1 68418.m05525 disease resistance protein (TIR-NBS-LRR... 30 1.0
At4g28200.1 68417.m04042 expressed protein 30 1.0
At4g14290.1 68417.m02202 expressed protein contains Interpro ent... 30 1.0
At4g19040.1 68417.m02805 pleckstrin homology (PH) domain-contain... 29 1.3
At2g47310.1 68415.m05906 flowering time control protein-related ... 29 1.3
At4g33530.1 68417.m04765 potassium transporter family protein si... 29 1.8
At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate mu... 29 1.8
At5g15110.1 68418.m01770 pectate lyase family protein similar to... 28 4.1
At2g26330.1 68415.m03159 leucine-rich repeat protein kinase, put... 28 4.1
At4g33030.1 68417.m04699 UDP-sulfoquinovose synthase / sulfite:U... 27 7.2
At1g76190.1 68414.m08848 auxin-responsive family protein similar... 27 7.2
At1g16070.1 68414.m01928 tubby family protein similar to Tubby r... 27 7.2
At5g37390.1 68418.m04498 hypothetical protein contains Pfam prof... 27 9.5
At3g09360.1 68416.m01110 transcription factor IIB (TFIIB) family... 27 9.5
At2g40650.1 68415.m05016 pre-mRNA splicing factor PRP38 family p... 27 9.5
At1g80390.1 68414.m09411 auxin-responsive AUX/IAA family protein... 27 9.5
>At2g43330.1 68415.m05388 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens], SP|Q01440 Membrane transporter D1
{Leishmania donovani}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 509
Score = 31.1 bits (67), Expect = 0.44
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 100 TMLLFSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEP 279
T + F + A AVLAV V G T SE+ + W + N S + + SD N++E
Sbjct: 442 TGMTFLILAGIAVLAVIFVIVFVPETQGLTFSEVEQIWKERAYGNISGWGSSSDSNNME- 500
Query: 280 YPLALSEEGNQ 312
L E+G+Q
Sbjct: 501 ---GLLEQGSQ 508
>At5g45060.1 68418.m05525 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1165
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 178 DGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSE 300
DG++IS+LP+N K R + LN D LE P +SE
Sbjct: 734 DGTSISQLPDNVGNLK---RLVLLNMKDCKVLETIPTCVSE 771
>At4g28200.1 68417.m04042 expressed protein
Length = 648
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/81 (25%), Positives = 41/81 (50%)
Frame = +1
Query: 214 DQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGYDQTVDQRFDSPQSNGELDNLIMRP 393
+Q KD+N+ LF++ +K E EE ++D + V+ + E + +++
Sbjct: 220 EQWKDENKELFMSLDEKEGNE------KEENDEDSIVEDVEDVTEKVDFLKEKGSNVLQT 273
Query: 394 ELYGEPPAMEGLASAFDLQRR 456
G A+E + S+FDL++R
Sbjct: 274 IYSG---AVEAIPSSFDLRKR 291
>At4g14290.1 68417.m02202 expressed protein contains Interpro entry
IPR000379
Length = 534
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 145 VSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGY- 321
+S PSN+ + SE E + S + D ++ +PYP L+ + D Y
Sbjct: 364 MSRTEVPSNDPSNQSSSETKEKESLEVSSSSSSDMISFDLSNGDPYPPHLAVALDDDQYV 423
Query: 322 DQTVDQRFDSPQSNGELDNLIM 387
+ VD+ D P + E + ++M
Sbjct: 424 EFHVDELADFPSNAEEEERMLM 445
>At4g19040.1 68417.m02805 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
contains Pfam profiles PF01852: START domain, PF00169:
PH domain
Length = 718
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 136 VLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQD 315
V+ A + S K G ++ + + DQT NR+ L D +D + + +A SE+ +
Sbjct: 404 VMVNMASSSLSLTKSGKSLHKSAFSLDQTNSVNRNSLLMDEDSDDDDEFQIAESEQEPET 463
Query: 316 GYDQT-VDQRFDSPQSNGEL 372
+T V + + P N +L
Sbjct: 464 SKPETDVKRPEEEPAHNIDL 483
>At2g47310.1 68415.m05906 flowering time control protein-related /
FCA gamma-related
Length = 512
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 334 DQRFDSPQSNGELDNLIMRPELYGEPPAMEGLASAFDLQRRKRGSGT 474
DQRF+ P +G+ N+I+ PP L++R+ S T
Sbjct: 56 DQRFNQPHYSGQQQNMIVDQSNNAPPPFPPSPCGGSSLRKRRSQSAT 102
>At4g33530.1 68417.m04765 potassium transporter family protein
similar to K+ transporter HAK5 [Arabidopsis thaliana]
GI:7108597; KUP/HAK/KT Transporter family member,
PMID:11500563; contains Pfam profile PF02705: K+
potassium transporter
Length = 855
Score = 29.1 bits (62), Expect = 1.8
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = +1
Query: 154 VPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGYDQTV 333
V S+ DGS I E D T +R +F +K+D E ++E+ + DGYD+
Sbjct: 4 VEEESSGGDGSEIDEEFGGDDSTTSLSRWVF---DEKDDYE-----VNEDYDDDGYDEHN 55
Query: 334 DQRFDSPQSNGELDNLIMR 390
DS + + ++ ++R
Sbjct: 56 HPEMDSDEEDDNVEQRLIR 74
>At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate
mutase family protein similar to X4 protein GI:21386798,
Y4 protein GI:21386800 from [Silene dioica]; contains
Pfam profiles PF00300: phosphoglycerate mutase family,
PF01535: PPR repeat
Length = 1053
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 298 EEGNQDGYDQTVDQRFDSPQSNG-ELDNLIMRPELYGEPPAMEGLASAFDLQRRKRGSGT 474
EE ++ D ++ D+ +SN +LDNL+++ L EP + ASA L + GT
Sbjct: 12 EEEEEEETDNEEEEEEDNGRSNTRQLDNLLVKKVLEQEPEMLPCHASASPLSPQLSSLGT 71
>At5g15110.1 68418.m01770 pectate lyase family protein similar to
pectate lyase P59 SP:P15722 from [Lycopersicon
esculentum]
Length = 472
Score = 27.9 bits (59), Expect = 4.1
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +1
Query: 103 MLLFSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPY 282
M+ S T +AV +PT N ISEL E W Q D+ R L +PY
Sbjct: 3 MVRLSKLMFTFCIAV-LIPTIRGN-----ISELDEYWSQRADEAREFTLQAYHS---DPY 53
Query: 283 PLALSEEGNQDGYDQTVDQRFDSPQSNGELDNLIMRPELYGEPPAMEGLASAFDLQRRK- 459
+ + ++ YD + D +P+ +G+ +PE E +E L S+ + RR
Sbjct: 54 EIV--DHFHERHYDNSTD--VTTPEEDGD-----AKPE-EEEKEFIEMLGSSTNSTRRSL 103
Query: 460 RGSG 471
RG G
Sbjct: 104 RGKG 107
>At2g26330.1 68415.m03159 leucine-rich repeat protein kinase,
putative (ERECTA) identical to uncharacterized receptor
protein kinase ERECTA [Arabidopsis thaliana]
gi|1389566|dbj|BAA11869; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 976
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 244 FLNKSDKNDLEPYPLALSEEGNQDGYDQTVDQ-RFDSPQSNGELDNLI 384
+LN S N P P+ LS GN D D + ++ P S G+L++L+
Sbjct: 407 YLNLSSNNIKGPIPVELSRIGNLDTLDLSNNKINGIIPSSLGDLEHLL 454
>At4g33030.1 68417.m04699 UDP-sulfoquinovose synthase /
sulfite:UDP-glucose sulfotransferase / sulfolipid
biosynthesis protein (SQD1) identical to gi:2736155
Length = 477
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 173 TKMAVPSVNCQKIGIKQKMIT 235
TK +PSV+ +KIG+K K +T
Sbjct: 456 TKQIMPSVSWKKIGVKTKSMT 476
>At1g76190.1 68414.m08848 auxin-responsive family protein similar to
indole-3-acetic acid induced protein ARG7 (SP:P32295)
[Vigna radiata]
Length = 123
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 172 NKDGSTISELPENWDQTKDDNRSLFLNKSDK----NDLEPYP-LALSEEGNQDGYDQTVD 336
N G +SEL E W + K + +++ N+ + D +P L + + +D + T+D
Sbjct: 5 NSKGIRLSELMEKWRRRKKGHFAVYTNEGKRFVLPLDYLNHPMLQVLLQMAEDEFGTTID 64
Query: 337 QRFDSPQSNGELDNLIM 387
P +D++IM
Sbjct: 65 GPLKVPCDGSLMDHIIM 81
>At1g16070.1 68414.m01928 tubby family protein similar to Tubby
related protein 1 (Tubby-like protein 1)
(Swiss-Prot:Q9Z273) [Mus musculus]; low similarity to
Tubby related protein 1 (Tubby-like protein 1)
(Swiss-Prot:O0029) {Homo sapiens}; similar to
phosphodiesterase (GI:467578) [Mus musculus]; contains
Pfam profile PF01167: Tub family
Length = 397
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 82 LF*PTVTMLLFSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSL 243
+F PT+T S + +L +NNK S+LP +W + K+ + L
Sbjct: 257 IFTPTITTWTGSYRRMRTLLPKQQPMQKNNNKQVQQASKLPLDWLENKEKIQKL 310
>At5g37390.1 68418.m04498 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 628
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 172 NKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPL 288
NKD LP+N DDN + D +D + PL
Sbjct: 105 NKDDGDDDNLPQNMQDGDDDNLPQNMQDDDDDDDDNQPL 143
>At3g09360.1 68416.m01110 transcription factor IIB (TFIIB) family
protein contains Pfam domain, PF00382: Transcription
factor TFIIB repeat
Length = 600
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 214 DQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGYDQTVD 336
++ K++N+ + N+ + + E EEGN + YD D
Sbjct: 536 EKKKEENKEMKSNEHENGENEDEDEEDEEEGNVESYDMKTD 576
>At2g40650.1 68415.m05016 pre-mRNA splicing factor PRP38 family
protein contains Pfam profile PF03371: PRP38 family
Length = 355
Score = 26.6 bits (56), Expect = 9.5
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +1
Query: 112 FSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSD-KNDLEPYPL 288
FSLT + V + + T + D + L + W T + N L KS ++D E
Sbjct: 139 FSLTHVDEV--IEELLTKDYSCD-IAMPRLKKRW--TLEQNGLLEPRKSVLEDDFEEEEE 193
Query: 289 ALSEEGNQDGYDQTVDQRFDSPQSNGELD 375
EG DG + +DQR SP+ E D
Sbjct: 194 KEENEGIADGSEDEMDQRRKSPERERERD 222
>At1g80390.1 68414.m09411 auxin-responsive AUX/IAA family protein
similar to SP|Q38825|AXI7_ARATH Auxin-responsive protein
IAA7 (Indoleacetic acid-induced protein 7). [Mouse-ear
cress] {Arabidopsis thaliana}; contains Pfam profile:
PF02309: AUX/IAA family
Length = 179
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 304 GNQDGYDQTVDQRFDSPQSNGELDNLIMRPELYGEPPAMEGLASAFDLQRRK 459
GN+ + +TVD + N + +++ +L G PP +A+A RRK
Sbjct: 40 GNKRRFLETVDLKLGEAHENNYISSMVTNDQLVGWPP----VATARKTVRRK 87
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,381,900
Number of Sequences: 28952
Number of extensions: 225987
Number of successful extensions: 688
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 898188928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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