Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0902
(463 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74; Bilate... 159 3e-38
UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;... 154 1e-36
UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17; Fungi/... 146 2e-34
UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubular... 144 6e-34
UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal ... 89 3e-17
UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia lam... 89 4e-17
UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillar... 83 3e-15
UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4; T... 74 1e-12
UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:... 71 9e-12
UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiell... 71 2e-11
UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Meta... 69 4e-11
UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:... 66 3e-10
UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1; Encepha... 58 7e-08
UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10; Archa... 53 3e-06
UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 51 1e-05
UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal ... 47 2e-04
UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7; Euryar... 47 2e-04
UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeu... 45 0.001
UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;... 45 0.001
UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9; Euryar... 44 0.002
UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13; Archa... 44 0.002
UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus... 43 0.003
UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3; Halobact... 42 0.007
UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:... 41 0.011
UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Re... 40 0.026
UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 38 0.11
UniRef50_A7TGC7 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole gen... 33 4.0
>UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74;
Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens
(Human)
Length = 84
Score = 159 bits (386), Expect = 3e-38
Identities = 69/84 (82%), Positives = 74/84 (88%)
Frame = -3
Query: 419 MPLAIDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 240
MPLA DLLHPSP E+RKH+ KRLV PN YFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 239 TILCQPTGGRARLTEGCFFRRKQH 168
T+LCQPTGG+ARLTEGC FRRKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;
n=100; Eukaryota|Rep: 40S ribosomal protein S27-like
protein - Homo sapiens (Human)
Length = 84
Score = 154 bits (373), Expect = 1e-36
Identities = 67/84 (79%), Positives = 73/84 (86%)
Frame = -3
Query: 419 MPLAIDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 240
MPLA DLLHPS E++KH+ KRLV PN YFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 239 TILCQPTGGRARLTEGCFFRRKQH 168
T+LCQPTGG+ARLTEGC FRRKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17;
Fungi/Metazoa group|Rep: 40S ribosomal protein S27 -
Neurospora crassa
Length = 82
Score = 146 bits (354), Expect = 2e-34
Identities = 63/82 (76%), Positives = 72/82 (87%)
Frame = -3
Query: 419 MPLAIDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 240
M LA+DLL+PSPASE RKH+LK LVP P +FMDVKCPGC+ ITTVFSHAQ VV+C GC+
Sbjct: 1 MVLAVDLLNPSPASEARKHKLKTLVPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCT 60
Query: 239 TILCQPTGGRARLTEGCFFRRK 174
T+LCQPTGG+ARLTEGC FRRK
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRK 82
>UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubularin;
n=2; Apocrita|Rep: PREDICTED: similar to myotubularin -
Nasonia vitripennis
Length = 2064
Score = 144 bits (350), Expect = 6e-34
Identities = 63/83 (75%), Positives = 69/83 (83%)
Frame = -3
Query: 422 TMPLAIDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGC 243
+MPLA D LHPSPA E+RKH+LKRLV PN YFMDVKCPGCY I T+FSHAQR V C GC
Sbjct: 1979 SMPLAKDFLHPSPAEEKRKHKLKRLVQKPNSYFMDVKCPGCYAIKTIFSHAQRPVECDGC 2038
Query: 242 STILCQPTGGRARLTEGCFFRRK 174
TILC PTGG+ARLTEGC FR+K
Sbjct: 2039 RTILCTPTGGKARLTEGCSFRKK 2061
>UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein S27 - Canis familiaris
Length = 115
Score = 89.4 bits (212), Expect = 3e-17
Identities = 43/64 (67%), Positives = 49/64 (76%)
Frame = -3
Query: 419 MPLAIDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 240
MPL DLLHPSP ++RKH+ K LV PN YFMD+KCPGCYKITTVFSHAQ VV+ A
Sbjct: 1 MPLVKDLLHPSP-EKKRKHKKKHLVQSPNSYFMDMKCPGCYKITTVFSHAQTVVLKA--Q 57
Query: 239 TILC 228
T+ C
Sbjct: 58 TLRC 61
>UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein S27 - Giardia
lamblia ATCC 50803
Length = 81
Score = 89.0 bits (211), Expect = 4e-17
Identities = 36/70 (51%), Positives = 48/70 (68%)
Frame = -3
Query: 407 IDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 228
+DLL+P P E+RKH+LKRLV PN YF+++KC GC I V+SHA V C GC++ +
Sbjct: 3 VDLLYPDPVEEQRKHKLKRLVQGPNSYFLEIKCAGCQDIVVVYSHANTPVFCPGCTSQIS 62
Query: 227 QPTGGRARLT 198
PTGG+ T
Sbjct: 63 IPTGGKCAFT 72
>UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillardia
theta|Rep: 40S ribosomal protein S27 - Guillardia theta
(Cryptomonas phi)
Length = 81
Score = 83.0 bits (196), Expect = 3e-15
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = -3
Query: 377 ERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 198
E+ KH+ KR++P+PN YF+++ C C +FSH+Q +VC C+ LC PTGG+ARL
Sbjct: 14 EKMKHKKKRIIPNPNSYFINIICKNCKNKNIIFSHSQTKIVCKNCALNLCYPTGGKARLI 73
Query: 197 EGCFFRR 177
+GC F R
Sbjct: 74 KGCKFSR 80
>UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S27,
putative - Trichomonas vaginalis G3
Length = 86
Score = 74.1 bits (174), Expect = 1e-12
Identities = 32/73 (43%), Positives = 43/73 (58%)
Frame = -3
Query: 413 LAIDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 234
L +D+LHPS E ++ K LVP+P F+ ++CP C +TT FSH+ V C C T
Sbjct: 4 LDVDILHPSVEQEAHTNKKKTLVPNPRSEFLSLRCPSCTGLTTAFSHSNVPVFCKNCQTP 63
Query: 233 LCQPTGGRARLTE 195
L PTGGR L +
Sbjct: 64 LATPTGGRILLAD 76
>UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:
LRRGT00170 - Rattus norvegicus (Rat)
Length = 496
Score = 71.3 bits (167), Expect = 9e-12
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = -3
Query: 377 ERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPT 219
E+RKH+ K LV P+ YFMDVK GCYK+ +FS VV+ GCST+ CQPT
Sbjct: 202 EKRKHKKKHLVQSPSSYFMDVKYLGCYKVPNIFSQEHTVVLYDGCSTVFCQPT 254
>UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiella
natans|Rep: Ribosomal protein S27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 93
Score = 70.5 bits (165), Expect = 2e-11
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = -3
Query: 407 IDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 228
+DL +PS +E +KH+LKRL+ PN +++ KC C KI +FSH+ C CST+L
Sbjct: 8 LDLSNPSKKTEAKKHKLKRLIQSPNSHYIATKCLKCKKINIIFSHSVFWKTCVDCSTLLT 67
Query: 227 QPTGGR 210
+P+GG+
Sbjct: 68 RPSGGK 73
>UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Metazoa
group|Rep: Ribosomal protein S27 - Homo sapiens (Human)
Length = 66
Score = 69.3 bits (162), Expect = 4e-11
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = -3
Query: 419 MPLAIDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPG 303
MPLA DLLHPSP E+RKH+ KRLV PN YFMDVKCPG
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39
>UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:
LRRGT00162 - Rattus norvegicus (Rat)
Length = 291
Score = 66.5 bits (155), Expect = 3e-10
Identities = 32/56 (57%), Positives = 39/56 (69%)
Frame = -3
Query: 422 TMPLAIDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVV 255
TM L L + E+RKH+ +RLV PN YFMDV+CPG Y+ITTVFS AQ VV+
Sbjct: 166 TMKLRRVCLQTAAKEEQRKHKKRRLVQSPNSYFMDVQCPGRYEITTVFSRAQTVVL 221
>UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S27
- Encephalitozoon cuniculi
Length = 85
Score = 58.4 bits (135), Expect = 7e-08
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = -3
Query: 413 LAIDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 234
+A DL P+ ++ RL N +FM V+C GC T +SH+Q + C GC I
Sbjct: 1 MASDLAFPTREKVGSTYKKDRLYREGNGFFMYVRCGGCRHTTCCYSHSQTNISCPGCGDI 60
Query: 233 LCQPTGGRARLTEGCFFRR 177
+ +GGRA ++ C F++
Sbjct: 61 ILTSSGGRAVVSPNCEFKK 79
>UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 217
Score = 57.6 bits (133), Expect = 1e-07
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = -3
Query: 404 DLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVV 255
DLL+P E++K++ KRL+ PN YFMDVKC C I +FS+AQ ++
Sbjct: 4 DLLNPIYEEEKQKNKFKRLIQAPNSYFMDVKCAQCQNIQMIFSNAQSTII 53
Score = 36.7 bits (81), Expect = 0.24
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 245 CSTILCQPTGGRARLTEGCFFRRK 174
CS ILC+PTGG+ ++ GC F+ K
Sbjct: 193 CSAILCKPTGGKVQIQAGCAFKIK 216
>UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10;
Archaea|Rep: 30S ribosomal protein S27e - Pyrobaculum
aerophilum
Length = 67
Score = 52.8 bits (121), Expect = 3e-06
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = -3
Query: 356 KRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 201
K L+P P F+ +CP C FSHA VV C C +L PTGG+A+L
Sbjct: 7 KVLIPQPKSKFIKTRCPDCGNEQITFSHAAMVVRCLVCGRVLAIPTGGKAKL 58
>UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4;
Thermoprotei|Rep: 30S ribosomal protein S27e - Aeropyrum
pernix
Length = 73
Score = 50.8 bits (116), Expect = 1e-05
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = -3
Query: 356 KRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 201
K L+P P F+ V CP C VFSH+ C C +L +PTGG+AR+
Sbjct: 13 KVLIPRPRSRFLLVTCPKCGNRQVVFSHSTFRARCLNCGEVLVEPTGGKARI 64
>UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Homo sapiens|Rep: PREDICTED: similar
to ribosomal protein S27 - Homo sapiens
Length = 83
Score = 46.8 bits (106), Expect = 2e-04
Identities = 31/84 (36%), Positives = 38/84 (45%)
Frame = -3
Query: 419 MPLAIDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 240
MPL DL HP +RR KRLV + Y MDVKC GC K V+ VV C C
Sbjct: 1 MPLTKDLPHPL---QRRSGNKKRLVQSQDCYVMDVKCSGCPKAAVVWEFC--VVDCPACR 55
Query: 239 TILCQPTGGRARLTEGCFFRRKQH 168
+ P G + + +QH
Sbjct: 56 LL---PDRGTSEAYRKMLLQTEQH 76
>UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Halobacterium salinarium (Halobacterium halobium)
Length = 57
Score = 46.8 bits (106), Expect = 2e-04
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = -3
Query: 326 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 201
F +V+CP C TVF A V CA C T L +PTGG A L
Sbjct: 5 FYNVECPDCENEQTVFGKASTEVACAVCGTTLARPTGGEADL 46
>UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S27E - Cenarchaeum
symbiosum
Length = 224
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -3
Query: 347 VPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 201
VP P F+ ++C C T V+S A+ V C C +L +P GG+A L
Sbjct: 8 VPEPTSRFVKIECESCGSPTIVYSMAKSAVNCRFCGNLLAEPAGGKAVL 56
>UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YKL156C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 38
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +1
Query: 301 QPGHLTSMK*KLGCGTSRLSSCFLLSDAGEGCNKS 405
QPGHLTS K LG T+ + CFL S+A GCNKS
Sbjct: 4 QPGHLTSRKYDLGPWTNVFNLCFLASEAAVGCNKS 38
>UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Pyrococcus furiosus
Length = 63
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -3
Query: 356 KRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGR 210
K ++P P F+ VKC C VFSH V C C L +PTGG+
Sbjct: 3 KPIIPMPRSRFLRVKCIDCGNEQIVFSHPATKVRCLICGATLVEPTGGK 51
>UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13;
Archaea|Rep: 30S ribosomal protein S27e - Methanopyrus
kandleri
Length = 73
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -3
Query: 350 LVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 201
LVP P F+ V+C C +F +A V C C L +PTGG+A++
Sbjct: 15 LVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKAKI 64
>UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S27E - Candidatus Nitrosopumilus maritimus SCM1
Length = 65
Score = 43.2 bits (97), Expect = 0.003
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -3
Query: 347 VPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 201
+P P+ F V C C ++ V+SHA V C C + + TG +A++
Sbjct: 8 IPKPSSKFQKVNCNECGELQIVYSHASTQVACNSCGNAIAEATGSKAKI 56
>UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3;
Halobacteriaceae|Rep: Ribosomal protein S27.eR -
Haloquadratum walsbyi (strain DSM 16790)
Length = 75
Score = 41.9 bits (94), Expect = 0.007
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = -3
Query: 335 NFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 207
NFY ++CP C +F A VV CA C T L PTGG A
Sbjct: 4 NFY--QLQCPDCNNEQVIFGKASTVVNCAVCGTTLATPTGGDA 44
>UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:
LRRGT00168 - Rattus norvegicus (Rat)
Length = 109
Score = 41.1 bits (92), Expect = 0.011
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = -3
Query: 416 PLAIDLLHPSPASERRKHELKRLVPHPNFYFMD 318
PLA DL HP P E+RK++ KRLV PN YF++
Sbjct: 8 PLAKDL-HPCPEEEKRKYKKKRLVQSPNSYFVE 39
>UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Rep:
Cxpwmw06 - Periplaneta americana (American cockroach)
Length = 54
Score = 39.9 bits (89), Expect = 0.026
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = +3
Query: 225 LTKDR*ASSAXHHSLCVTKNCCNLVTARALNIHEI 329
LT+DR S +++LC+T++ C+LV RAL++H++
Sbjct: 20 LTQDRRTSCTHYYTLCMTEHRCDLVATRALHVHKV 54
>UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S27e -
Thermoplasma acidophilum
Length = 65
Score = 37.9 bits (84), Expect = 0.11
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 335 NFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 213
N +F+ +KC C + VF+ V C C + +PTGG
Sbjct: 13 NGHFVKIKCRDCGNVQVVFARPSSTVTCNICGATIAKPTGG 53
>UniRef50_A7TGC7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 904
Score = 33.9 bits (74), Expect = 1.7
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = -1
Query: 343 HILTFISWMLSALAVTRLQQFLVTHREWWXALDAQRSFVNPLVAVLD*LKDVFLEENNIN 164
H+ T ++S L + FL W L SF+N L+ L + + N
Sbjct: 147 HVATLDGKLVSTLVKAQYGSFLKVLFGQWMLLGIPASFINSLINYTTKLCSISINRQISN 206
Query: 163 I*VLDRALFNFKIFFPIV 110
+LD+ L N KIF+ +V
Sbjct: 207 F-LLDKYLKNHKIFYSVV 223
>UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 302
Score = 32.7 bits (71), Expect = 4.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 335 NFYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEG 192
N + + CP C + + ++V CAGC I+ QP G +R + G
Sbjct: 239 NNFVIKGNCPACRR--QFIGYKNQIVRCAGCGNIVWQPKGDVSRGSRG 284
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,196,711
Number of Sequences: 1657284
Number of extensions: 7118155
Number of successful extensions: 16421
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 16053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16394
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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