Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0902
         (463 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118959-1|AAM50819.1|   84|Drosophila melanogaster LD37859p pro...   160   1e-39
AE014297-3747|AAF56428.1|   84|Drosophila melanogaster CG10423-P...   160   1e-39
AY113459-1|AAM29464.1|  361|Drosophila melanogaster RE36989p pro...    28   5.3  
AE014134-864|AAF52211.2|  388|Drosophila melanogaster CG14040-PA...    28   5.3  

>AY118959-1|AAM50819.1|   84|Drosophila melanogaster LD37859p
           protein.
          Length = 84

 Score =  160 bits (388), Expect = 1e-39
 Identities = 70/82 (85%), Positives = 75/82 (91%)
 Frame = -3

Query: 419 MPLAIDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 240
           MPLA DLLHP PA E+RKH+LKRLV HPN YFMDVKCPGCY+ITTVFSHAQ VVVCAGC+
Sbjct: 1   MPLAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCA 60

Query: 239 TILCQPTGGRARLTEGCFFRRK 174
           TILCQPTGGRA+LTEGC FRRK
Sbjct: 61  TILCQPTGGRAKLTEGCSFRRK 82


>AE014297-3747|AAF56428.1|   84|Drosophila melanogaster CG10423-PA
           protein.
          Length = 84

 Score =  160 bits (388), Expect = 1e-39
 Identities = 70/82 (85%), Positives = 75/82 (91%)
 Frame = -3

Query: 419 MPLAIDLLHPSPASERRKHELKRLVPHPNFYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 240
           MPLA DLLHP PA E+RKH+LKRLV HPN YFMDVKCPGCY+ITTVFSHAQ VVVCAGC+
Sbjct: 1   MPLAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCA 60

Query: 239 TILCQPTGGRARLTEGCFFRRK 174
           TILCQPTGGRA+LTEGC FRRK
Sbjct: 61  TILCQPTGGRAKLTEGCSFRRK 82


>AY113459-1|AAM29464.1|  361|Drosophila melanogaster RE36989p
           protein.
          Length = 361

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 141 YLILRFFFQLYNGVIFFKFTTMDPFEHY 58
           Y++  F + LYN + F    T DP  +Y
Sbjct: 88  YMVPAFLYCLYNNLAFVNLATFDPTTYY 115


>AE014134-864|AAF52211.2|  388|Drosophila melanogaster CG14040-PA
           protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 141 YLILRFFFQLYNGVIFFKFTTMDPFEHY 58
           Y++  F + LYN + F    T DP  +Y
Sbjct: 88  YMVPAFLYCLYNNLAFVNLATFDPTTYY 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,237,891
Number of Sequences: 53049
Number of extensions: 336584
Number of successful extensions: 805
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)