Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0899
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    25   0.44 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.78 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.8  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.6  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 297 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIP 422
           + LWD    E   RL   +  +  VIL   ++   + LEN+P
Sbjct: 396 IKLWDMFQNESLTRLYKKAGKEIPVILWTSTLTQKEYLENLP 437


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 344 PQPIVIFLASGIPQSQFHLFSIHFDVGNVILK 249
           P P+V+ L   IP    H     F V N+IL+
Sbjct: 449 PIPLVVVLTHLIPFMLIHQGETQFVVANIILR 480


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = -3

Query: 223 N*SLLNTISRHVLPHAPSPTIT---NFLRIAAIGPELAEEEHHH 101
           N S  ++ SRH + H P P +T   +  R+AA    +AE    H
Sbjct: 149 NYSAYSSASRHHVDHQPVPYLTPADDRGRVAAAAAMVAETASFH 192


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 369 HPYLDTRAAAADRNLLGQRY 310
           HP+     +A  RN +GQ++
Sbjct: 421 HPFAYIPFSAGSRNCIGQKF 440


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 262 LPTSKWMENKWN 297
           LPT KWM+ K N
Sbjct: 194 LPTYKWMQVKRN 205


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 429 TSLGCSRANPASPPRS 382
           T +  S+A+PA+ PRS
Sbjct: 202 TKVKASKASPAAAPRS 217


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 369 HPYLDTRAAAADRNLLGQRY 310
           HP+     +A  RN +GQ++
Sbjct: 421 HPFAYIPFSAGSRNCIGQKF 440


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 262 LPTSKWMENKWN 297
           LPT KWM+ K N
Sbjct: 194 LPTYKWMQVKRN 205


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 262 LPTSKWMENKWN 297
           LPT KWM+ K N
Sbjct: 194 LPTYKWMQVKRN 205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,212
Number of Sequences: 336
Number of extensions: 3797
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)