Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0898
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    25   1.8  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   2.3  
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        24   5.4  
AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive ...    24   5.4  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 537 LSNIEDTITIAYLMASSRRKVVVGPSSSDSANSHHGCFSL 418
           L   E+     Y + +  +  ++GP++S SA    GC S+
Sbjct: 238 LKQEEEAFREGYYLPTQAKPEILGPATSMSAALRFGCLSV 277


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 710 AVSGRKYRMAGVTFPCSSWIR*NRRLSECGSCDVSRSRFRC 588
           AV  R + MA + F C+  +     +  C  CD +  R  C
Sbjct: 4   AVITRDFAMAAICFSCAEPLEATGCIISCAYCDATFHRGCC 44


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 365 VNIICFQELWNMPFAFCTREKQPW 436
           VN+I F+ LW  PF       +P+
Sbjct: 192 VNVIYFKGLWTYPFPEVANNVKPF 215


>AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive
           serpin-related proteinISerpF1 protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 365 VNIICFQELWNMPFAFCTREKQPW 436
           VN+I F+ LW  PF       +P+
Sbjct: 93  VNVIYFKGLWTYPFPEVANNVKPF 116


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,906
Number of Sequences: 2352
Number of extensions: 15522
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)