Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0896
         (569 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B55A8 Cluster: PREDICTED: similar to conserved ...    42   0.010
UniRef50_UPI000051A794 Cluster: PREDICTED: similar to CG2991-PB,...    42   0.010
UniRef50_A7SIG3 Cluster: Predicted protein; n=1; Nematostella ve...    34   2.0  
UniRef50_Q9VQI2 Cluster: CG2991-PA, isoform A; n=5; Endopterygot...    33   4.7  
UniRef50_Q7REM8 Cluster: Putative uncharacterized protein PY0503...    32   8.2  

>UniRef50_UPI00015B55A8 Cluster: PREDICTED: similar to conserved
           hypothetical protein, partial; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to conserved
           hypothetical protein, partial - Nasonia vitripennis
          Length = 569

 Score = 41.9 bits (94), Expect = 0.010
 Identities = 22/53 (41%), Positives = 35/53 (66%)
 Frame = -1

Query: 566 YVALRFLGTNTVSAYHRARVYGLKILTEPFADVQDSEQGQLSTISRTVTVEIA 408
           YV +RFL  NTV AY RA++  L I++      +++   Q+STIS +V+V++A
Sbjct: 521 YVCIRFLSLNTVVAYQRAKISSLNIVS-----AENTLGAQVSTISHSVSVDLA 568


>UniRef50_UPI000051A794 Cluster: PREDICTED: similar to CG2991-PB,
           isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG2991-PB, isoform B - Apis mellifera
          Length = 552

 Score = 41.9 bits (94), Expect = 0.010
 Identities = 22/56 (39%), Positives = 33/56 (58%)
 Frame = -1

Query: 566 YVALRFLGTNTVSAYHRARVYGLKILTEPFADVQDSEQGQLSTISRTVTVEIAPKD 399
           YV +RFL  NTV AY RA++  L I++       ++    +STIS TV V++A  +
Sbjct: 498 YVCIRFLSLNTVVAYQRAKISSLNIISS-----DNNGNAHVSTISHTVCVDLAKSE 548


>UniRef50_A7SIG3 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 521

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = -1

Query: 566 YVALRFLGTNTVSAYHRARVYGLKIL----TEPFADVQDSEQG 450
           Y+ LR LG N VS Y RAR+  L I+     E  A  + SEQG
Sbjct: 471 YLCLRLLGFNIVSVYRRARITALTIIGRKPEERTASPEPSEQG 513


>UniRef50_Q9VQI2 Cluster: CG2991-PA, isoform A; n=5;
           Endopterygota|Rep: CG2991-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 562

 Score = 33.1 bits (72), Expect = 4.7
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = -1

Query: 566 YVALRFLGTNTVSAYHRARVYGLKILTEPFADVQDSEQGQLSTISRTVTVEIAPKDV 396
           YV ++ LG NTV AY RA+V  + I+T        SE  +L TI   V+   + + V
Sbjct: 507 YVCVKCLGENTVVAYQRAKVSSINIVT-------SSEMEKLHTICEEVSASTSAEAV 556


>UniRef50_Q7REM8 Cluster: Putative uncharacterized protein PY05036;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY05036 - Plasmodium yoelii
           yoelii
          Length = 254

 Score = 32.3 bits (70), Expect = 8.2
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -1

Query: 248 EKKTKKKNGGSVWKLTYETFNGRRRECDENKY*KYYIKKFRSSTNVMNMRKHIVSSVH 75
           +KK + K     ++ TY+T N      DE+K  +Y+ KK RS  + M+  K +V  ++
Sbjct: 47  KKKQQHKRSIKEFEATYQTQNIEEDNDDEDKRFEYF-KKMRSGYSNMDQHKELVEEIN 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 386,509,539
Number of Sequences: 1657284
Number of extensions: 6057283
Number of successful extensions: 16331
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16330
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)