Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0894
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.4  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   4.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.3  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   7.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   9.6  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.6  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 549 TLLQIFTLKNPKIFSLKFHLNTQCPL 626
           T L++FT+ N  +F +  + +T C +
Sbjct: 294 TALRLFTIDNKLLFGVLAYYSTTCDI 319


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 489 RLMQWLKLKPLHLNQPMTKKTLL 557
           +L+QW KL P   + P+T +  L
Sbjct: 224 QLVQWAKLVPHFTSLPLTDQVQL 246


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 135 NGVIALKSFSLSEQSCNSSFVNPN 64
           NG + + +  L E+  N +  NPN
Sbjct: 199 NGAVNIDNIDLYEEIFNGNRANPN 222


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 635 LYGQEFTLSEN 667
           +YG EF LSEN
Sbjct: 93  IYGPEFLLSEN 103


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 135 NGVIALKSFSLSEQSCNSSFVNPN 64
           NG + + +  L E+  N +  NPN
Sbjct: 192 NGAVNVDNIDLYEEIFNGNRANPN 215


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 563 IHTEEPQDIFPE 598
           +HT EP D+ PE
Sbjct: 216 LHTGEPTDLTPE 227


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 654 VNSCPYNLISGGIVCLDEIS 595
           +N C  N    G  C+D+I+
Sbjct: 69  INDCKVNPCENGGTCVDKIN 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,582
Number of Sequences: 336
Number of extensions: 2359
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)