Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0894
(696 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32857| Best HMM Match : TolA (HMM E-Value=1.1) 31 0.89
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6) 30 1.6
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_17147| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_9952| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_32268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_27985| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_49798| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3) 28 8.3
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_32857| Best HMM Match : TolA (HMM E-Value=1.1)
Length = 448
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 77 NDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSEVAESF 208
N++ +D D E++ D+ +NN + + HDDE + VA+S+
Sbjct: 233 NNKDEDRHDEERNNEDEDRHDEERNNEDEDRHDDEERDIVADSY 276
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 77 NDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSE 193
NDE +D D E++ D+ +NN E + HD+E E
Sbjct: 149 NDEHEDRHDEERNNEHEDRHDEERNNEEEDRHDEERNDE 187
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 77 NDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSE 193
NDE +D D E++ + DK ++N E HD++ +E
Sbjct: 185 NDEHEDRRDEERNKKDEDRHDKERSNEEENRHDEKRNNE 223
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 77 NDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSE 193
N+E +D D E++ + D+ +NN + + HD+E +E
Sbjct: 221 NNEEEDRHDEERNNKDEDRHDEERNNEDEDRHDEERNNE 259
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 29 QIPEIPDGKSSELGFTNDELQDCSDSEKDLR 121
++P++PDGK+ E+ F + L + S K L+
Sbjct: 210 ELPDLPDGKNVEISFEREGLVEASTQTKPLK 240
>SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6)
Length = 192
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 26 EQIPEIPDGKSSELGFTNDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSE 193
E+ E DG E N+E +D D E++ D+ +NN E + HD+E +E
Sbjct: 54 ERNDEDEDGHDEE---RNNEHEDRHDEERNNEHEDRHDEERNNEEEDKHDEERNNE 106
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 77 NDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSE 193
N+E +D D E++ D+ +NN + HD+E +E
Sbjct: 80 NNEHEDRHDEERNNEEEDKHDEERNNEHEDRHDEERNNE 118
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 77 NDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSE 193
N+E +D D E++ D+ +NN + + HD+E +E
Sbjct: 92 NNEEEDKHDEERNNEHEDRHDEERNNEDEDRHDEERNNE 130
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +2
Query: 443 PEET--SETKSVEDFNVAANAMVE-TEAITPEPTYDKENVVADIHTEEPQ-DIFPEISSK 610
PE T SET D A V +TPE T E +A T+EP+ PE +
Sbjct: 3277 PETTVASETTVAPDSTAAPETTVAPATTVTPESTVAPETTIAPETTDEPETTAVPETTVM 3336
Query: 611 HTMPPE 628
T+ P+
Sbjct: 3337 TTVAPD 3342
>SB_17147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Frame = +2
Query: 38 EIPDGKSSELGFTNDE-LQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSEVAESFIX 214
+I +G E G NDE + + E D+ + + N E +D+E + E+ +
Sbjct: 332 DIEEGYREETGEENDEEVGSDEEGEVDIERGYEEETGEENDEEAGYDEEEEVEIKRGY-- 389
Query: 215 XXXXXXXXXXXXXIIQDSSVDILQALRSSEVGDEKDEDFRYQVEE 349
+ VDI + E G+E DE+ Y EE
Sbjct: 390 GEETGEENDKEAGYNEKEEVDIERGYEE-ETGEENDEEAGYDEEE 433
>SB_9952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +2
Query: 455 SETKSVEDFNVAANAMVET-EAITPEPTYDKENVVADIHTEEPQDIFPE------ISSKH 613
SE VE F + + +ET +A +P KE H++ +FP ++ +
Sbjct: 272 SERPDVERFTIMPTSSIETPKASLKKPKTQKE---VPEHSQSSYQLFPVQKGEQMLNQSN 328
Query: 614 TMPPEIRLYGQEFTLSENADSP 679
+ P IRL GQE +A P
Sbjct: 329 SSVPSIRLVGQEQQAQPSAPMP 350
>SB_32268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +2
Query: 308 GDEKDEDFRYQVEEYKKVESDIXXXXXXXXXXXXXXXXXQINNPN--PEETSETKSVEDF 481
GDE+ ED +Y+ E+YK+ E + + N + +TK++E
Sbjct: 25 GDEEYEDKKYEEEKYKEEEYEDKDWNMKSKNMKTKNIKTKKNTTKNMKRKNMKTKNMETK 84
Query: 482 NVAANAMVETEAITPEPTYDKENVVADIHTEEPQD 586
NV M +T+ + + K N ++ T + +D
Sbjct: 85 NVKTKNM-KTKDMKTKNIKTKNNTTKNMKTNKKED 118
>SB_27985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 26 EQIPEIPDGKSSELGFTNDELQDCSDSEKDLRAITPLDKNKNNSENEIH 172
++ P++ K + T D SD + + TPL+K+ +N+++EIH
Sbjct: 176 DRTPQVRGRKRARTRITQTNDSDVSDIQSNN---TPLEKDSSNAQDEIH 221
>SB_49798| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 77 NDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSE 193
N+ L D +DS + T D+N+ SEN+ D++++++
Sbjct: 61 NEVLDDEADSPEQTLNETGTDENETKSENDNRDEDLKNK 99
>SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)
Length = 769
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +2
Query: 494 NAMVETEAITPEPTYDKENVVADIHTEEPQDIFPEISSKHTMPPEIRLYGQEFTLSE 664
N E +AI P E+ H P D P + T PP +RL+ + L E
Sbjct: 106 NGEDEQQAILPTSEVSSESTSTVFHFSLPPDTEPLQPALCTTPPPLRLWQKPIELIE 162
>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1670
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +2
Query: 494 NAMVETEAITPEPTYDKENVVADIHTEEPQDIFPEISSKHTMPPEIRLYGQEFTLSE 664
N E +AI P E+ H P D P + T PP +RL+ + L E
Sbjct: 773 NGEDEQQAILPTSEVSSESTSTVFHFSLPPDTEPLQPALCTTPPPLRLWQKPIELIE 829
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,213,886
Number of Sequences: 59808
Number of extensions: 273834
Number of successful extensions: 1068
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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