Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0892
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13070-3|AAM22058.1|  429|Caenorhabditis elegans Chaperonin cont...   279   1e-75
U13070-2|AAC46642.1|  539|Caenorhabditis elegans Chaperonin cont...   279   1e-75
Z35599-3|CAA84660.1|  542|Caenorhabditis elegans Hypothetical pr...    89   3e-18
Z32840-7|CAA83681.1|  542|Caenorhabditis elegans Hypothetical pr...    89   3e-18
U25698-1|AAA92843.1|  542|Caenorhabditis elegans CCT-5 protein.        89   3e-18
Z66500-12|CAA91308.1|  549|Caenorhabditis elegans Hypothetical p...    81   7e-16
U07941-1|AAB05072.1|  549|Caenorhabditis elegans CCT-1 protein.        81   7e-16
AC024136-4|AAF35963.3|  543|Caenorhabditis elegans Hypothetical ...    64   1e-10
Z49068-8|CAA88861.1|  540|Caenorhabditis elegans Hypothetical pr...    60   1e-09
U25697-1|AAA92842.1|  540|Caenorhabditis elegans CCT-4 protein.        60   1e-09
Z68318-10|CAA92697.1|  529|Caenorhabditis elegans Hypothetical p...    58   7e-09
U25632-1|AAA93233.1|  529|Caenorhabditis elegans CCT-2 protein.        58   7e-09
AL031268-2|CAA20331.1|  529|Caenorhabditis elegans Hypothetical ...    58   7e-09
Z32840-6|CAD01079.1|  336|Caenorhabditis elegans Hypothetical pr...    48   6e-06
Z68012-1|CAA92016.1|  304|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    29   2.8  
AC098856-1|AAL27250.1|  102|Caenorhabditis elegans Hypothetical ...    28   6.4  

>U13070-3|AAM22058.1|  429|Caenorhabditis elegans Chaperonin
           containing tcp-1 protein6, isoform b protein.
          Length = 429

 Score =  279 bits (684), Expect = 1e-75
 Identities = 137/212 (64%), Positives = 166/212 (78%), Gaps = 4/212 (1%)
 Frame = +3

Query: 3   LHPRIITEGFDIARNKSLEVLESMKISIEIARENLVDVARTSLKTKVHPSLADVLTDACV 182
           LHPRI+TEGF+ A  K+LE+LE  K    + R+ LV+V RT+L+TK+H  LAD +T+  V
Sbjct: 114 LHPRIVTEGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVV 173

Query: 183 DAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYILTC 362
           DAVL IR  G+  DLHMVE MEM H +  +T LV+GLV+DHGARHPDMP+ V++AYILTC
Sbjct: 174 DAVLAIRRDGEEPDLHMVEKMEMHHDSDMDTTLVRGLVLDHGARHPDMPRHVKDAYILTC 233

Query: 363 NVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLC----DGTDKTF 530
           NVSLEYEKTEVNSG FYK+A++RE L+AAEREFI +RV KI+ LKKK+     DG +K F
Sbjct: 234 NVSLEYEKTEVNSGLFYKTAKEREALLAAEREFITRRVHKIIELKKKVIDNSPDGKNKGF 293

Query: 531 VVINQKGIDPLSLDAFAKEGIIGLRRAKRRNM 626
           VVINQKGIDP SLD  A EGI+ LRRAKRRNM
Sbjct: 294 VVINQKGIDPPSLDLLASEGILALRRAKRRNM 325


>U13070-2|AAC46642.1|  539|Caenorhabditis elegans Chaperonin
           containing tcp-1 protein6, isoform a protein.
          Length = 539

 Score =  279 bits (684), Expect = 1e-75
 Identities = 137/212 (64%), Positives = 166/212 (78%), Gaps = 4/212 (1%)
 Frame = +3

Query: 3   LHPRIITEGFDIARNKSLEVLESMKISIEIARENLVDVARTSLKTKVHPSLADVLTDACV 182
           LHPRI+TEGF+ A  K+LE+LE  K    + R+ LV+V RT+L+TK+H  LAD +T+  V
Sbjct: 114 LHPRIVTEGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVV 173

Query: 183 DAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYILTC 362
           DAVL IR  G+  DLHMVE MEM H +  +T LV+GLV+DHGARHPDMP+ V++AYILTC
Sbjct: 174 DAVLAIRRDGEEPDLHMVEKMEMHHDSDMDTTLVRGLVLDHGARHPDMPRHVKDAYILTC 233

Query: 363 NVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLC----DGTDKTF 530
           NVSLEYEKTEVNSG FYK+A++RE L+AAEREFI +RV KI+ LKKK+     DG +K F
Sbjct: 234 NVSLEYEKTEVNSGLFYKTAKEREALLAAEREFITRRVHKIIELKKKVIDNSPDGKNKGF 293

Query: 531 VVINQKGIDPLSLDAFAKEGIIGLRRAKRRNM 626
           VVINQKGIDP SLD  A EGI+ LRRAKRRNM
Sbjct: 294 VVINQKGIDPPSLDLLASEGILALRRAKRRNM 325


>Z35599-3|CAA84660.1|  542|Caenorhabditis elegans Hypothetical
           protein C07G2.3a protein.
          Length = 542

 Score = 88.6 bits (210), Expect = 3e-18
 Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
 Frame = +3

Query: 3   LHPRIITEGFDIARNKSLEVLESMKISIEIA-RENLVDVARTSLKTKVHPSLADVLTDAC 179
           +HP  I +GFD+A  K+LE L+S+     +  RE LV+ A+TSL +K+         +  
Sbjct: 129 IHPIKIADGFDLACKKALETLDSISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIA 188

Query: 180 VDAVLTIRT-PGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYIL 356
           VDAVL++     K V+  M+++         +T+LVKG+V+D    HP MPK ++NA + 
Sbjct: 189 VDAVLSVADIESKDVNFEMIKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVA 248

Query: 357 TCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKI 485
                 E  K +        S ED + L   ERE  +  +R++
Sbjct: 249 ILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFETMIRQV 291


>Z32840-7|CAA83681.1|  542|Caenorhabditis elegans Hypothetical
           protein C07G2.3a protein.
          Length = 542

 Score = 88.6 bits (210), Expect = 3e-18
 Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
 Frame = +3

Query: 3   LHPRIITEGFDIARNKSLEVLESMKISIEIA-RENLVDVARTSLKTKVHPSLADVLTDAC 179
           +HP  I +GFD+A  K+LE L+S+     +  RE LV+ A+TSL +K+         +  
Sbjct: 129 IHPIKIADGFDLACKKALETLDSISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIA 188

Query: 180 VDAVLTIRT-PGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYIL 356
           VDAVL++     K V+  M+++         +T+LVKG+V+D    HP MPK ++NA + 
Sbjct: 189 VDAVLSVADIESKDVNFEMIKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVA 248

Query: 357 TCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKI 485
                 E  K +        S ED + L   ERE  +  +R++
Sbjct: 249 ILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFETMIRQV 291


>U25698-1|AAA92843.1|  542|Caenorhabditis elegans CCT-5 protein.
          Length = 542

 Score = 88.6 bits (210), Expect = 3e-18
 Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
 Frame = +3

Query: 3   LHPRIITEGFDIARNKSLEVLESMKISIEIA-RENLVDVARTSLKTKVHPSLADVLTDAC 179
           +HP  I +GFD+A  K+LE L+S+     +  RE LV+ A+TSL +K+         +  
Sbjct: 129 IHPIKIADGFDLACKKALETLDSISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIA 188

Query: 180 VDAVLTIRT-PGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYIL 356
           VDAVL++     K V+  M+++         +T+LVKG+V+D    HP MPK ++NA + 
Sbjct: 189 VDAVLSVADIESKDVNFEMIKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVA 248

Query: 357 TCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKI 485
                 E  K +        S ED + L   ERE  +  +R++
Sbjct: 249 ILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFETMIRQV 291


>Z66500-12|CAA91308.1|  549|Caenorhabditis elegans Hypothetical
           protein T05C12.7 protein.
          Length = 549

 Score = 81.0 bits (191), Expect = 7e-16
 Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 5/213 (2%)
 Frame = +3

Query: 3   LHPRIITEGFDIARNKSLEVL-ESMKISIE-IARENLVDVARTSLKTKVHPSLADVLTDA 176
           +HP  I  G+ +A  ++++ + E++  + + I R+++V+ A+TS+ +K+    AD   + 
Sbjct: 116 VHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGEL 175

Query: 177 CVDAVLTIRTP--GKPV-DLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENA 347
            VDA   +R    GK    ++ V +++   K+A E+VLVKG  ++       MP RV+NA
Sbjct: 176 VVDAAEAVRVENNGKVTYPINAVNVLKAHGKSARESVLVKGYALNCTVASQAMPLRVQNA 235

Query: 348 YILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKT 527
            I   + SL   K +++ G      ED  KL A  RE  D   R+I    K L  G +  
Sbjct: 236 KIACLDFSL--MKAKMHLGISV-VVEDPAKLEAIRREEFDITKRRI---DKILKAGAN-- 287

Query: 528 FVVINQKGIDPLSLDAFAKEGIIGLRRAKRRNM 626
            VV+   GID L L  F + G + +RR K+ ++
Sbjct: 288 -VVLTTGGIDDLCLKQFVESGAMAVRRCKKSDL 319


>U07941-1|AAB05072.1|  549|Caenorhabditis elegans CCT-1 protein.
          Length = 549

 Score = 81.0 bits (191), Expect = 7e-16
 Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 5/213 (2%)
 Frame = +3

Query: 3   LHPRIITEGFDIARNKSLEVL-ESMKISIE-IARENLVDVARTSLKTKVHPSLADVLTDA 176
           +HP  I  G+ +A  ++++ + E++  + + I R+++V+ A+TS+ +K+    AD   + 
Sbjct: 116 VHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGEL 175

Query: 177 CVDAVLTIRTP--GKPV-DLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENA 347
            VDA   +R    GK    ++ V +++   K+A E+VLVKG  ++       MP RV+NA
Sbjct: 176 VVDAAEAVRVENNGKVTYPINAVNVLKAHGKSARESVLVKGYALNCTVASQAMPLRVQNA 235

Query: 348 YILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKT 527
            I   + SL   K +++ G      ED  KL A  RE  D   R+I    K L  G +  
Sbjct: 236 KIACLDFSL--MKAKMHLGISV-VVEDPAKLEAIRREEFDITKRRI---DKILKAGAN-- 287

Query: 528 FVVINQKGIDPLSLDAFAKEGIIGLRRAKRRNM 626
            VV+   GID L L  F + G + +RR K+ ++
Sbjct: 288 -VVLTTGGIDDLCLKQFVESGAMAVRRCKKSDL 319


>AC024136-4|AAF35963.3|  543|Caenorhabditis elegans Hypothetical
           protein F54A3.3 protein.
          Length = 543

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 6/210 (2%)
 Frame = +3

Query: 6   HPRIITEGFDIARNKSLEVLES-MKISIEIARE-NLVDVARTSLKTKVHPSLADVLTDAC 179
           HP +I + +  A    ++  E+    +++I  +  +  V ++ L TK+     D+  +  
Sbjct: 120 HPTLIIKAYRQALEDMIQWSENKFSKTVDITDDAEIAKVVKSCLGTKMISKWMDLAVNIS 179

Query: 180 VDAVLTIRTPG---KPVDL-HMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENA 347
           + AV TIR      + +D+     I ++      ++ +VKG+V++    H  M +R+EN 
Sbjct: 180 IQAVKTIRVEKAGVREIDIKRYCRIEKIPGGRIEDSQVVKGIVVNKDILHAKMRRRIENP 239

Query: 348 YILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKT 527
            I+  + +LEY+K E  +       ED   ++  E + I ++  +I+ LK  L       
Sbjct: 240 RIVLLDCNLEYKKGESQTSLEIMREEDISAILEQEEQAIRKQCDEIIKLKPDL------- 292

Query: 528 FVVINQKGIDPLSLDAFAKEGIIGLRRAKR 617
             V  +KGI  L+     K GI  LRR K+
Sbjct: 293 --VFTEKGISDLAQHFLLKAGITCLRRLKK 320


>Z49068-8|CAA88861.1|  540|Caenorhabditis elegans Hypothetical
           protein K01C8.10 protein.
          Length = 540

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 40/166 (24%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
 Frame = +3

Query: 3   LHPRIITEGFDIARNKSLEVLESMKISIEIARENLVD-VARTSLKTKVHPSLADVLTDAC 179
           +HP  I+E F  A  ++ ++L+ M   ++++ + L++ +A TSL +KV    + +L    
Sbjct: 127 IHPTTISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMA 186

Query: 180 VDAVLTIRTPGKP--VDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYI 353
           V+AV  I        V+L M++I++    T  E+ L++G ++D        P R+E A I
Sbjct: 187 VNAVKKIINSENDSNVNLKMIKIIKKMGDTVEESELIEGALIDQKTMGRGAPTRIEKAKI 246

Query: 354 LTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVA 491
                 +   KT++ +          ++ +  ER+++ +  ++I A
Sbjct: 247 GLIQFQISPPKTDMENQVIITDYAQMDRALKEERQYLLEICKQIKA 292


>U25697-1|AAA92842.1|  540|Caenorhabditis elegans CCT-4 protein.
          Length = 540

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 40/166 (24%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
 Frame = +3

Query: 3   LHPRIITEGFDIARNKSLEVLESMKISIEIARENLVD-VARTSLKTKVHPSLADVLTDAC 179
           +HP  I+E F  A  ++ ++L+ M   ++++ + L++ +A TSL +KV    + +L    
Sbjct: 127 IHPTTISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMA 186

Query: 180 VDAVLTIRTPGKP--VDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYI 353
           V+AV  I        V+L M++I++    T  E+ L++G ++D        P R+E A I
Sbjct: 187 VNAVKKIINSENDSNVNLKMIKIIKKMGDTVEESELIEGALIDQKTMGRGAPTRIEKAKI 246

Query: 354 LTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVA 491
                 +   KT++ +          ++ +  ER+++ +  ++I A
Sbjct: 247 GLIQFQISPPKTDMENQVIITDYAQMDRALKEERQYLLEICKQIKA 292


>Z68318-10|CAA92697.1|  529|Caenorhabditis elegans Hypothetical
           protein T21B10.7 protein.
          Length = 529

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 4/167 (2%)
 Frame = +3

Query: 3   LHPRIITEGFDIARNKSLEVLESMKI-SIEIARENLVDVARTSLKTKVHPSLADVLTDAC 179
           +HP+ I  G+  A   + E L+   I S +  R++L+ +ART+L +K+     +      
Sbjct: 118 IHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLA 177

Query: 180 VDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDM--PKRVENAYI 353
           VDAVL ++  G   +L  ++I++    +  E+ L +G +++   + P M  P+RVE A I
Sbjct: 178 VDAVLRLKGSG---NLDAIQIIKKLGGSMNESYLDEGFLLE---KLPGMFQPRRVEKAKI 231

Query: 354 LTCNVSLEYEKTEV-NSGFFYKSAEDREKLVAAEREFIDQRVRKIVA 491
           L  N  ++ +K +V  S           +L AAE+  + ++V KI+A
Sbjct: 232 LIANTPMDTDKVKVFGSRVRVDGVAKVAELEAAEKLKMKEKVDKILA 278


>U25632-1|AAA93233.1|  529|Caenorhabditis elegans CCT-2 protein.
          Length = 529

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 4/167 (2%)
 Frame = +3

Query: 3   LHPRIITEGFDIARNKSLEVLESMKI-SIEIARENLVDVARTSLKTKVHPSLADVLTDAC 179
           +HP+ I  G+  A   + E L+   I S +  R++L+ +ART+L +K+     +      
Sbjct: 118 IHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLA 177

Query: 180 VDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDM--PKRVENAYI 353
           VDAVL ++  G   +L  ++I++    +  E+ L +G +++   + P M  P+RVE A I
Sbjct: 178 VDAVLRLKGSG---NLDAIQIIKKLGGSMNESYLDEGFLLE---KLPGMFQPRRVEKAKI 231

Query: 354 LTCNVSLEYEKTEV-NSGFFYKSAEDREKLVAAEREFIDQRVRKIVA 491
           L  N  ++ +K +V  S           +L AAE+  + ++V KI+A
Sbjct: 232 LIANTPMDTDKVKVFGSRVRVDGVAKVAELEAAEKLKMKEKVDKILA 278


>AL031268-2|CAA20331.1|  529|Caenorhabditis elegans Hypothetical
           protein T21B10.7 protein.
          Length = 529

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 4/167 (2%)
 Frame = +3

Query: 3   LHPRIITEGFDIARNKSLEVLESMKI-SIEIARENLVDVARTSLKTKVHPSLADVLTDAC 179
           +HP+ I  G+  A   + E L+   I S +  R++L+ +ART+L +K+     +      
Sbjct: 118 IHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLA 177

Query: 180 VDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDM--PKRVENAYI 353
           VDAVL ++  G   +L  ++I++    +  E+ L +G +++   + P M  P+RVE A I
Sbjct: 178 VDAVLRLKGSG---NLDAIQIIKKLGGSMNESYLDEGFLLE---KLPGMFQPRRVEKAKI 231

Query: 354 LTCNVSLEYEKTEV-NSGFFYKSAEDREKLVAAEREFIDQRVRKIVA 491
           L  N  ++ +K +V  S           +L AAE+  + ++V KI+A
Sbjct: 232 LIANTPMDTDKVKVFGSRVRVDGVAKVAELEAAEKLKMKEKVDKILA 278


>Z32840-6|CAD01079.1|  336|Caenorhabditis elegans Hypothetical
           protein C07G2.3b protein.
          Length = 336

 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 24/72 (33%), Positives = 37/72 (51%)
 Frame = +3

Query: 270 ETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAA 449
           +T+LVKG+V+D    HP MPK ++NA +       E  K +        S ED + L   
Sbjct: 14  DTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRDY 73

Query: 450 EREFIDQRVRKI 485
           ERE  +  +R++
Sbjct: 74  ERETFETMIRQV 85


>Z68012-1|CAA92016.1|  304|Caenorhabditis elegans Hypothetical
           protein T24D5.1 protein.
          Length = 304

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = +3

Query: 318 PDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALK 497
           P++P++ ++ Y+L CN+++  EK E  S       E  E++    R F  +  R++   K
Sbjct: 166 PEIPRKDQDGYLLECNLNIFLEKLERFSDPQINQNEG-EEMGPILRAFSTEVKRRVYLEK 224

Query: 498 KKLCD 512
            ++ D
Sbjct: 225 SEVLD 229


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
            protein C08G9.2 protein.
          Length = 2224

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 251  ETQDCY*NCTCKRSSNGSWCTSPRYAKAC 337
            +  DC+    C ++S G+ C++PR A AC
Sbjct: 1447 QDSDCHGFLKCCQASCGTMCSAPRIATAC 1475


>AC098856-1|AAL27250.1|  102|Caenorhabditis elegans Hypothetical
           protein Y37F4.3 protein.
          Length = 102

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -3

Query: 563 QGVDSFLVDNDESLVSTVA*FLFESNDLSYSLIN-KFPFSSNKLFSILSRLVEEARIYFC 387
           +  DSF V +D  + +T + F    +D  Y+LIN    F+ N  ++ LS   E   + FC
Sbjct: 40  ENADSFFVLSDLVIKNTCSKFPGNIDDPCYTLINLPVRFTYNTFWTFLSPFRELICVAFC 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,320,522
Number of Sequences: 27780
Number of extensions: 252615
Number of successful extensions: 735
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)