Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0891
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC037798-1|AAH37798.1| 176|Homo sapiens TPPP3 protein protein. 81 3e-15
BC000691-1|AAH00691.1| 176|Homo sapiens brain specific protein ... 81 3e-15
AF132972-1|AAD27747.1| 176|Homo sapiens CGI-38 protein protein. 81 3e-15
BT020035-1|AAV38838.1| 219|Homo sapiens brain-specific protein ... 73 1e-12
BC131506-1|AAI31507.1| 219|Homo sapiens tubulin polymerization ... 73 1e-12
BC040496-1|AAH40496.1| 234|Homo sapiens TPPP protein protein. 73 1e-12
AY319261-1|AAQ96657.1| 219|Homo sapiens fibroblast growth facto... 73 1e-12
AB017016-1|BAA36164.1| 219|Homo sapiens p25 alpha protein. 73 1e-12
BC038970-1|AAH38970.1| 170|Homo sapiens tubulin polymerization-... 69 2e-11
AY173946-1|AAO49716.1| 170|Homo sapiens brain-specific protein ... 69 2e-11
AY072034-1|AAL62338.1| 170|Homo sapiens p25 beta protein. 69 2e-11
D87440-1|BAA13382.2| 702|Homo sapiens KIAA0252 protein. 33 0.66
BC015052-1|AAH15052.1| 585|Homo sapiens Rtf1, Paf1/RNA polymera... 33 0.66
>BC037798-1|AAH37798.1| 176|Homo sapiens TPPP3 protein protein.
Length = 176
Score = 81.4 bits (192), Expect = 3e-15
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Frame = +1
Query: 298 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKF---LD 468
GDPK+ G+ + K K KV DGK +T TD I F K+K + +Y++F L+
Sbjct: 21 GDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALE 80
Query: 469 DLA------KNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQ 630
+LA K+K+ D I + + G+ VTK+ A VDRLTDTS+YTGSH++
Sbjct: 81 ELATKRFKGKSKEEAFDAICQLVA--GKEPANVGVTKAKTGGA-VDRLTDTSRYTGSHKE 137
Query: 631 RFDETG 648
RFDE+G
Sbjct: 138 RFDESG 143
>BC000691-1|AAH00691.1| 176|Homo sapiens brain specific protein
protein.
Length = 176
Score = 81.4 bits (192), Expect = 3e-15
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Frame = +1
Query: 298 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKF---LD 468
GDPK+ G+ + K K KV DGK +T TD I F K+K + +Y++F L+
Sbjct: 21 GDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALE 80
Query: 469 DLA------KNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQ 630
+LA K+K+ D I + + G+ VTK+ A VDRLTDTS+YTGSH++
Sbjct: 81 ELATKRFKGKSKEEAFDAICQLVA--GKEPANVGVTKAKTGGA-VDRLTDTSRYTGSHKE 137
Query: 631 RFDETG 648
RFDE+G
Sbjct: 138 RFDESG 143
>AF132972-1|AAD27747.1| 176|Homo sapiens CGI-38 protein protein.
Length = 176
Score = 81.4 bits (192), Expect = 3e-15
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Frame = +1
Query: 298 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKF---LD 468
GDPK+ G+ + K K KV DGK +T TD I F K+K + +Y++F L+
Sbjct: 21 GDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALE 80
Query: 469 DLA------KNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQ 630
+LA K+K+ D I + + G+ VTK+ A VDRLTDTS+YTGSH++
Sbjct: 81 ELATKRFQGKSKEEAFDAICQLVA--GKEPANVGVTKAKTGGA-VDRLTDTSRYTGSHKE 137
Query: 631 RFDETG 648
RFDE+G
Sbjct: 138 RFDESG 143
>BT020035-1|AAV38838.1| 219|Homo sapiens brain-specific protein p25
alpha protein.
Length = 219
Score = 72.5 bits (170), Expect = 1e-12
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 7/124 (5%)
Frame = +1
Query: 298 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVK---LGIDDYQKFLD 468
GD ++ G+ + K K +VIDG+ +T TD I F K+K + + +Q+ L+
Sbjct: 62 GDARATGREMHGKNWSKLCKDCQVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALE 121
Query: 469 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 636
+LAK K +E +++ G+ I S VTK+ ++ V RLTDT+K+TGSH++RF
Sbjct: 122 ELAKKRFKDKSSEEAVREVHRLIEGKAPIISGVTKA-ISSPTVSRLTDTTKFTGSHKERF 180
Query: 637 DETG 648
D +G
Sbjct: 181 DPSG 184
>BC131506-1|AAI31507.1| 219|Homo sapiens tubulin polymerization
promoting protein protein.
Length = 219
Score = 72.5 bits (170), Expect = 1e-12
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 7/124 (5%)
Frame = +1
Query: 298 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVK---LGIDDYQKFLD 468
GD ++ G+ + K K +VIDG+ +T TD I F K+K + + +Q+ L+
Sbjct: 62 GDARATGREMHGKNWSKLCKDCQVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALE 121
Query: 469 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 636
+LAK K +E +++ G+ I S VTK+ ++ V RLTDT+K+TGSH++RF
Sbjct: 122 ELAKKRFKDKSSEEAVREVHRLIEGKAPIISGVTKA-ISSPTVSRLTDTTKFTGSHKERF 180
Query: 637 DETG 648
D +G
Sbjct: 181 DPSG 184
>BC040496-1|AAH40496.1| 234|Homo sapiens TPPP protein protein.
Length = 234
Score = 72.5 bits (170), Expect = 1e-12
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 7/124 (5%)
Frame = +1
Query: 298 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVK---LGIDDYQKFLD 468
GD ++ G+ + K K +VIDG+ +T TD I F K+K + + +Q+ L+
Sbjct: 77 GDARATGREMHGKNWSKLCKDCQVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALE 136
Query: 469 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 636
+LAK K +E +++ G+ I S VTK+ ++ V RLTDT+K+TGSH++RF
Sbjct: 137 ELAKKRFKDKSSEEAVREVHRLIEGKAPIISGVTKA-ISSPTVSRLTDTTKFTGSHKERF 195
Query: 637 DETG 648
D +G
Sbjct: 196 DPSG 199
>AY319261-1|AAQ96657.1| 219|Homo sapiens fibroblast growth factor-2
repression protein-1 protein.
Length = 219
Score = 72.5 bits (170), Expect = 1e-12
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 7/124 (5%)
Frame = +1
Query: 298 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVK---LGIDDYQKFLD 468
GD ++ G+ + K K +VIDG+ +T TD I F K+K + + +Q+ L+
Sbjct: 62 GDARATGREMHGKNWSKLCKDCQVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALE 121
Query: 469 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 636
+LAK K +E +++ G+ I S VTK+ ++ V RLTDT+K+TGSH++RF
Sbjct: 122 ELAKKRFKDKSSEEAVREVHRLIEGKAPIISGVTKA-ISSPTVSRLTDTTKFTGSHKERF 180
Query: 637 DETG 648
D +G
Sbjct: 181 DPSG 184
>AB017016-1|BAA36164.1| 219|Homo sapiens p25 alpha protein.
Length = 219
Score = 72.5 bits (170), Expect = 1e-12
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 7/124 (5%)
Frame = +1
Query: 298 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVK---LGIDDYQKFLD 468
GD ++ G+ + K K +VIDG+ +T TD I F K+K + + +Q+ L+
Sbjct: 62 GDARATGREMHGKNWSKLCKDCQVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALE 121
Query: 469 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 636
+LAK K +E +++ G+ I S VTK+ ++ V RLTDT+K+TGSH++RF
Sbjct: 122 ELAKKRFKDKSSEEAVREVHRLIEGKAPIISGVTKA-ISSPTVSRLTDTTKFTGSHKERF 180
Query: 637 DETG 648
D +G
Sbjct: 181 DPSG 184
>BC038970-1|AAH38970.1| 170|Homo sapiens tubulin
polymerization-promoting protein family member 2
protein.
Length = 170
Score = 68.5 bits (160), Expect = 2e-11
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Frame = +1
Query: 298 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLD--- 468
G+ S G + K K ++DGK +T+TD I F K+K+ +Q+F +
Sbjct: 16 GESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQQFKEAVK 75
Query: 469 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 636
+L + K DE+ + + G+ T+ TK+ AVDRLTDTSKYTG+H++ F
Sbjct: 76 ELGQKRFKGKSPDEVLENIYGLMEGKDPATTGATKA-TTVGAVDRLTDTSKYTGTHKELF 134
Query: 637 DETG 648
DE+G
Sbjct: 135 DESG 138
>AY173946-1|AAO49716.1| 170|Homo sapiens brain-specific protein
p25-like protein protein.
Length = 170
Score = 68.5 bits (160), Expect = 2e-11
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Frame = +1
Query: 298 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLD--- 468
G+ S G + K K ++DGK +T+TD I F K+K+ +Q+F +
Sbjct: 16 GESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQQFKEAVK 75
Query: 469 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 636
+L + K DE+ + + G+ T+ TK+ AVDRLTDTSKYTG+H++ F
Sbjct: 76 ELGQKRFKGKSPDEVLENIYGLMEGKDPATTGATKA-TTVGAVDRLTDTSKYTGTHKELF 134
Query: 637 DETG 648
DE+G
Sbjct: 135 DESG 138
>AY072034-1|AAL62338.1| 170|Homo sapiens p25 beta protein.
Length = 170
Score = 68.5 bits (160), Expect = 2e-11
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Frame = +1
Query: 298 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLD--- 468
G+ S G + K K ++DGK +T+TD I F K+K+ +Q+F +
Sbjct: 16 GESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQQFKEAVK 75
Query: 469 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 636
+L + K DE+ + + G+ T+ TK+ AVDRLTDTSKYTG+H++ F
Sbjct: 76 ELGQKRFKGKSPDEVLENIYGLMEGKDPATTGATKA-TTVGAVDRLTDTSKYTGTHKELF 134
Query: 637 DETG 648
DE+G
Sbjct: 135 DESG 138
>D87440-1|BAA13382.2| 702|Homo sapiens KIAA0252 protein.
Length = 702
Score = 33.5 bits (73), Expect = 0.66
Identities = 33/141 (23%), Positives = 63/141 (44%)
Frame = +1
Query: 130 STEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDXXXXXXXXXXXXXXXGDPK 309
S+ + + D++ E E +V + N+ +S+ + S SED GD +
Sbjct: 127 SSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLM---GDEE 183
Query: 310 SDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKK 489
+ +++ ++ + I+ +++ I KKLK+ K +K + K KK
Sbjct: 184 DRARLEQMTEKEREQELFNRIEKREVLKRRFEIK-KKLKTAK------KK--EKKEKKKK 234
Query: 490 VELDEIKKKLTTCGQPGITSH 552
E ++ KKKLT + +TSH
Sbjct: 235 QEEEQEKKKLTQIQESQVTSH 255
>BC015052-1|AAH15052.1| 585|Homo sapiens Rtf1, Paf1/RNA polymerase
II complex component, homolog (S. cerevisiae) protein.
Length = 585
Score = 33.5 bits (73), Expect = 0.66
Identities = 33/141 (23%), Positives = 63/141 (44%)
Frame = +1
Query: 130 STEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDXXXXXXXXXXXXXXXGDPK 309
S+ + + D++ E E +V + N+ +S+ + S SED GD +
Sbjct: 10 SSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLM---GDEE 66
Query: 310 SDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKK 489
+ +++ ++ + I+ +++ I KKLK+ K +K + K KK
Sbjct: 67 DRARLEQMTEKEREQELFNRIEKREVLKRRFEIK-KKLKTAK------KK--EKKEKKKK 117
Query: 490 VELDEIKKKLTTCGQPGITSH 552
E ++ KKKLT + +TSH
Sbjct: 118 QEEEQEKKKLTQIQESQVTSH 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.309 0.124 0.334
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,782,627
Number of Sequences: 237096
Number of extensions: 1786408
Number of successful extensions: 3625
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3614
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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