Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0891
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    24   1.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   4.4  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   5.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.9  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 641 SSKRCLCEPVYLLVSVNRSTAAAAAGDFVTCDVIP 537
           SS   L   +Y+L+++ R +A     +F TC   P
Sbjct: 90  SSPTILISYIYILMAILRMSADGGCRNFSTCSSHP 124


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 496 LDEIKKKLTTCGQPGITSHVTKS 564
           +D I  KLT   QPG+T+ +  S
Sbjct: 641 MDAICTKLTADCQPGVTAFIVTS 663


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 644 VSSKRCLCEPVYLLVSVNRSTAAA 573
           V ++RCLCE +Y  + ++    AA
Sbjct: 321 VVARRCLCEYLYKQLELHTEDRAA 344


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 128 IFLYKCLMYLCDDIIYASESVADRRLSDA 42
           +FL+ C     + I+Y + ++ DR  + A
Sbjct: 301 LFLFACTNSCMNPIVYGAFNIRDRNKTSA 329


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 614 VYLLVSVNRSTAAAAAGDFVTCDVIP 537
           +Y+L+++ R +A     +F TC   P
Sbjct: 98  IYILMAILRMSADGGCRNFSTCSSHP 123


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 121 RKMSTEAQNTDAAVEQ-VTQEVKDVKLENGNAP 216
           RK+  E + TD  + Q + ++V D +L NG  P
Sbjct: 382 RKLDEEMKRTDELLYQMIPKQVAD-RLRNGENP 413


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.309    0.124    0.334 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,949
Number of Sequences: 438
Number of extensions: 3435
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)