Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0890
(639 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130630-1|AAI30631.1| 830|Homo sapiens PHC2 protein protein. 51 4e-06
BC110863-1|AAI10864.2| 323|Homo sapiens polyhomeotic homolog 2 ... 51 4e-06
BC092492-1|AAH92492.1| 405|Homo sapiens PHC2 protein protein. 51 4e-06
BC068573-1|AAH68573.1| 405|Homo sapiens PHC2 protein protein. 51 4e-06
BC029269-1|AAH29269.1| 323|Homo sapiens polyhomeotic homolog 2 ... 51 4e-06
BC028396-1|AAH28396.3| 323|Homo sapiens polyhomeotic homolog 2 ... 51 4e-06
AL513327-5|CAI13957.1| 858|Homo sapiens polyhomeotic homolog 2 ... 51 4e-06
AL513327-4|CAI13956.1| 464|Homo sapiens polyhomeotic homolog 2 ... 51 4e-06
AL513327-3|CAI13955.1| 323|Homo sapiens polyhomeotic homolog 2 ... 51 4e-06
AJ419231-1|CAD11673.1| 858|Homo sapiens polyhomeotic 2 protein. 51 4e-06
EF560717-1|ABQ59027.1| 983|Homo sapiens PHC3 protein protein. 50 5e-06
BC131772-1|AAI31773.1| 983|Homo sapiens PHC3 protein protein. 50 5e-06
AJ320486-1|CAC86587.2| 983|Homo sapiens homolog of polyhomeotic... 50 5e-06
AF444193-1|AAM51781.1| 983|Homo sapiens polyhomeotic 3 protein ... 50 5e-06
AF380154-1|AAM46139.1| 964|Homo sapiens early development regul... 50 5e-06
BX640639-1|CAE45787.1| 610|Homo sapiens hypothetical protein pr... 49 2e-05
BC073964-1|AAH73964.1| 957|Homo sapiens PHC1 protein protein. 49 2e-05
BC017748-1|AAH17748.1| 447|Homo sapiens PHC1 protein protein. 49 2e-05
BC002871-1|AAH02871.2| 481|Homo sapiens PHC1 protein protein. 49 2e-05
AB209063-1|BAD92300.1| 1099|Homo sapiens Polyhomeotic-like prote... 49 2e-05
U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog pr... 48 4e-05
U89278-1|AAC51170.1| 433|Homo sapiens polyhomeotic 2 homolog pr... 41 0.003
BC132689-1|AAI32690.1| 520|Homo sapiens resistance to inhibitor... 35 0.28
AK001482-1|BAA91717.1| 536|Homo sapiens protein ( Homo sapiens ... 35 0.28
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 31 3.4
BC071845-1|AAH71845.1| 197|Homo sapiens zinc finger protein 581... 30 6.0
BC071620-1|AAH71620.1| 197|Homo sapiens ZNF581 protein protein. 30 6.0
BC010097-1|AAH10097.1| 197|Homo sapiens zinc finger protein 581... 30 6.0
BC001219-1|AAH01219.1| 197|Homo sapiens zinc finger protein 581... 30 6.0
>BC130630-1|AAI30631.1| 830|Homo sapiens PHC2 protein protein.
Length = 830
Score = 50.8 bits (116), Expect = 4e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2
Query: 251 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
P+A+VKP ILTHVIEG+VIQE EPF V R
Sbjct: 532 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 561
>BC110863-1|AAI10864.2| 323|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 323
Score = 50.8 bits (116), Expect = 4e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2
Query: 251 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
P+A+VKP ILTHVIEG+VIQE EPF V R
Sbjct: 25 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 54
>BC092492-1|AAH92492.1| 405|Homo sapiens PHC2 protein protein.
Length = 405
Score = 50.8 bits (116), Expect = 4e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2
Query: 251 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
P+A+VKP ILTHVIEG+VIQE EPF V R
Sbjct: 107 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 136
>BC068573-1|AAH68573.1| 405|Homo sapiens PHC2 protein protein.
Length = 405
Score = 50.8 bits (116), Expect = 4e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2
Query: 251 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
P+A+VKP ILTHVIEG+VIQE EPF V R
Sbjct: 107 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 136
>BC029269-1|AAH29269.1| 323|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 323
Score = 50.8 bits (116), Expect = 4e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2
Query: 251 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
P+A+VKP ILTHVIEG+VIQE EPF V R
Sbjct: 25 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 54
>BC028396-1|AAH28396.3| 323|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 323
Score = 50.8 bits (116), Expect = 4e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2
Query: 251 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
P+A+VKP ILTHVIEG+VIQE EPF V R
Sbjct: 25 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 54
>AL513327-5|CAI13957.1| 858|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 858
Score = 50.8 bits (116), Expect = 4e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2
Query: 251 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
P+A+VKP ILTHVIEG+VIQE EPF V R
Sbjct: 560 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 589
>AL513327-4|CAI13956.1| 464|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 464
Score = 50.8 bits (116), Expect = 4e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2
Query: 251 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
P+A+VKP ILTHVIEG+VIQE EPF V R
Sbjct: 166 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 195
>AL513327-3|CAI13955.1| 323|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 323
Score = 50.8 bits (116), Expect = 4e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2
Query: 251 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
P+A+VKP ILTHVIEG+VIQE EPF V R
Sbjct: 25 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 54
>AJ419231-1|CAD11673.1| 858|Homo sapiens polyhomeotic 2 protein.
Length = 858
Score = 50.8 bits (116), Expect = 4e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2
Query: 251 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
P+A+VKP ILTHVIEG+VIQE EPF V R
Sbjct: 560 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 589
>EF560717-1|ABQ59027.1| 983|Homo sapiens PHC3 protein protein.
Length = 983
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +2
Query: 206 TPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
T H S + +K P+A+VKP ILTHVIEG+VIQE EPF V+R
Sbjct: 679 TSMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEGLEPFPVSR 722
>BC131772-1|AAI31773.1| 983|Homo sapiens PHC3 protein protein.
Length = 983
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +2
Query: 206 TPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
T H S + +K P+A+VKP ILTHVIEG+VIQE EPF V+R
Sbjct: 679 TSMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEGLEPFPVSR 722
>AJ320486-1|CAC86587.2| 983|Homo sapiens homolog of polyhomeotic 3
protein.
Length = 983
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +2
Query: 206 TPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
T H S + +K P+A+VKP ILTHVIEG+VIQE EPF V+R
Sbjct: 679 TSMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEGLEPFPVSR 722
>AF444193-1|AAM51781.1| 983|Homo sapiens polyhomeotic 3 protein
protein.
Length = 983
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +2
Query: 206 TPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
T H S + +K P+A+VKP ILTHVIEG+VIQE EPF V+R
Sbjct: 679 TSMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEGLEPFPVSR 722
>AF380154-1|AAM46139.1| 964|Homo sapiens early development
regulator 3 protein.
Length = 964
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +2
Query: 206 TPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNR 340
T H S + +K P+A+VKP ILTHVIEG+VIQE EPF V+R
Sbjct: 660 TSMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEGLEPFPVSR 703
>BX640639-1|CAE45787.1| 610|Homo sapiens hypothetical protein
protein.
Length = 610
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +2
Query: 239 DKGLPKAMVKPNILTHVIEGYVIQEAGEPFAV 334
D P+A+VKP ILTH+IEG+VIQE EPF V
Sbjct: 327 DSKPPQAIVKPQILTHIIEGFVIQEGAEPFPV 358
>BC073964-1|AAH73964.1| 957|Homo sapiens PHC1 protein protein.
Length = 957
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +2
Query: 239 DKGLPKAMVKPNILTHVIEGYVIQEAGEPFAV 334
D P+A+VKP ILTH+IEG+VIQE EPF V
Sbjct: 674 DSKPPQAIVKPQILTHIIEGFVIQEGAEPFPV 705
>BC017748-1|AAH17748.1| 447|Homo sapiens PHC1 protein protein.
Length = 447
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +2
Query: 239 DKGLPKAMVKPNILTHVIEGYVIQEAGEPFAV 334
D P+A+VKP ILTH+IEG+VIQE EPF V
Sbjct: 164 DSKPPQAIVKPQILTHIIEGFVIQEGAEPFPV 195
>BC002871-1|AAH02871.2| 481|Homo sapiens PHC1 protein protein.
Length = 481
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +2
Query: 239 DKGLPKAMVKPNILTHVIEGYVIQEAGEPFAV 334
D P+A+VKP ILTH+IEG+VIQE EPF V
Sbjct: 198 DSKPPQAIVKPQILTHIIEGFVIQEGAEPFPV 229
>AB209063-1|BAD92300.1| 1099|Homo sapiens Polyhomeotic-like protein
1 variant protein.
Length = 1099
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +2
Query: 239 DKGLPKAMVKPNILTHVIEGYVIQEAGEPFAV 334
D P+A+VKP ILTH+IEG+VIQE EPF V
Sbjct: 816 DSKPPQAIVKPQILTHIIEGFVIQEGAEPFPV 847
>U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog
protein.
Length = 1004
Score = 47.6 bits (108), Expect = 4e-05
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 239 DKGLPKAMVKPNILTHVIEGYVIQEAGEPF 328
D P+A+VKP ILTH+IEG+VIQE EPF
Sbjct: 721 DSKPPQAIVKPQILTHIIEGFVIQEGAEPF 750
>U89278-1|AAC51170.1| 433|Homo sapiens polyhomeotic 2 homolog
protein.
Length = 433
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2
Query: 251 PKAMVKPNILTHVIEGYVIQEAGE 322
P+A+VKP ILTHVIEG+VIQE +
Sbjct: 138 PQAIVKPQILTHVIEGFVIQEGAD 161
>BC132689-1|AAI32690.1| 520|Homo sapiens resistance to inhibitors
of cholinesterase 8 homolog B (C. elegans) protein.
Length = 520
Score = 34.7 bits (76), Expect = 0.28
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 299 YVIQEAGEPFAVNRPLREWADKEDKENKLPSSDEPPRKKQMLEG 430
Y+++ AGE A+ R LR+++DK K S+DE RKK + EG
Sbjct: 8 YIVR-AGEAGAIERVLRDYSDKHRATFKFESTDEDKRKK-LCEG 49
>AK001482-1|BAA91717.1| 536|Homo sapiens protein ( Homo sapiens
cDNA FLJ10620 fis, clone NT2RP2005495. ).
Length = 536
Score = 34.7 bits (76), Expect = 0.28
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 299 YVIQEAGEPFAVNRPLREWADKEDKENKLPSSDEPPRKKQMLEG 430
Y+++ AGE A+ R LR+++DK K S+DE RKK + EG
Sbjct: 8 YIVR-AGEAGAIERVLRDYSDKHRATFKFESTDEDKRKK-LCEG 49
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 31.1 bits (67), Expect = 3.4
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +1
Query: 148 GDHSVRSFRYINYVQEHAMYSASYQPSRCTRQRAPQSYGEAEHTDARD--RRICHPGGGR 321
G S RS ++ V H +++ +R + R S+ H ARD R G
Sbjct: 3377 GGRSGRSGSFLYQVSTHEQSESAHGRTRTSTGRRQGSH----HEQARDSSRHSASQEGQD 3432
Query: 322 TIRGEPTSTRMG*QRRQRKQT 384
TIRG P S+R G Q +Q+
Sbjct: 3433 TIRGHPGSSRRGRQGSHYEQS 3453
>BC071845-1|AAH71845.1| 197|Homo sapiens zinc finger protein 581
protein.
Length = 197
Score = 30.3 bits (65), Expect = 6.0
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 163 RSFRYINYVQEHAMYSASYQPSRCTRQRAPQSYGEAEHTDARDRRICHPGGGR 321
R F Y++Y+Q H++ + +P C +++ A H AR I GGGR
Sbjct: 94 RVFEYMSYLQRHSITHSEVKPFEC--DICGKAFKRASHL-ARHHSIHLAGGGR 143
>BC071620-1|AAH71620.1| 197|Homo sapiens ZNF581 protein protein.
Length = 197
Score = 30.3 bits (65), Expect = 6.0
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 163 RSFRYINYVQEHAMYSASYQPSRCTRQRAPQSYGEAEHTDARDRRICHPGGGR 321
R F Y++Y+Q H++ + +P C +++ A H AR I GGGR
Sbjct: 94 RVFEYMSYLQRHSITHSEVKPFEC--DICGKAFKRASHL-ARHHSIHLAGGGR 143
>BC010097-1|AAH10097.1| 197|Homo sapiens zinc finger protein 581
protein.
Length = 197
Score = 30.3 bits (65), Expect = 6.0
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 163 RSFRYINYVQEHAMYSASYQPSRCTRQRAPQSYGEAEHTDARDRRICHPGGGR 321
R F Y++Y+Q H++ + +P C +++ A H AR I GGGR
Sbjct: 94 RVFEYMSYLQRHSITHSEVKPFEC--DICGKAFKRASHL-ARHHSIHLAGGGR 143
>BC001219-1|AAH01219.1| 197|Homo sapiens zinc finger protein 581
protein.
Length = 197
Score = 30.3 bits (65), Expect = 6.0
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 163 RSFRYINYVQEHAMYSASYQPSRCTRQRAPQSYGEAEHTDARDRRICHPGGGR 321
R F Y++Y+Q H++ + +P C +++ A H AR I GGGR
Sbjct: 94 RVFEYMSYLQRHSITHSEVKPFEC--DICGKAFKRASHL-ARHHSIHLAGGGR 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,205,372
Number of Sequences: 237096
Number of extensions: 2063142
Number of successful extensions: 5393
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5393
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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