Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0890
(639 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98269-1|CAB10975.1| 1589|Drosophila melanogaster EG:87B1.5,FBgn... 71 1e-12
X63672-1|CAA45211.1| 1589|Drosophila melanogaster polyhomeotic p... 71 1e-12
BT016124-1|AAV37009.1| 1346|Drosophila melanogaster LD01444p pro... 71 1e-12
AL132797-4|CAB60096.1| 1359|Drosophila melanogaster EG:BACN25G24... 71 1e-12
AE014298-338|AAF45727.3| 1589|Drosophila melanogaster CG18412-PA... 71 1e-12
AE014298-337|AAF45726.3| 1537|Drosophila melanogaster CG3895-PA ... 71 1e-12
BT022832-1|AAY55248.1| 216|Drosophila melanogaster IP13378p pro... 30 3.0
BT022826-1|AAY55242.1| 293|Drosophila melanogaster IP13278p pro... 30 3.0
BT022793-1|AAY55209.1| 389|Drosophila melanogaster IP13578p pro... 30 3.0
BT022790-1|AAY55206.1| 389|Drosophila melanogaster IP13478p pro... 30 3.0
AE014134-411|AAF51253.2| 575|Drosophila melanogaster CG31684-PA... 30 3.0
AY051962-1|AAK93386.1| 1487|Drosophila melanogaster LD42916p pro... 29 7.0
AE014134-1458|AAF52639.1| 1487|Drosophila melanogaster CG7806-PA... 29 7.0
BT023779-1|AAZ41788.1| 380|Drosophila melanogaster LD24968p pro... 28 9.3
AY089667-1|AAL90405.1| 321|Drosophila melanogaster RH38929p pro... 28 9.3
AY060956-1|AAL28504.1| 325|Drosophila melanogaster GM08802p pro... 28 9.3
AE014298-881|AAF46157.1| 380|Drosophila melanogaster CG3847-PA ... 28 9.3
>Z98269-1|CAB10975.1| 1589|Drosophila melanogaster
EG:87B1.5,FBgn0004861;ph-p protein.
Length = 1589
Score = 70.9 bits (166), Expect = 1e-12
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 197 TQCTPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNRPLREWADKEDKE 376
T T S + K LPKAM+KPN+LTHVI+G++IQEA EPF V R + +ADK+
Sbjct: 1279 TSTTTTTTSSISNGSKDLPKAMIKPNVLTHVIDGFIIQEANEPFPVTR--QRYADKD--- 1333
Query: 377 NKLPSSDEPPRKKQMLEGGASLPRI 451
SDEPP+KK ++ L I
Sbjct: 1334 ----VSDEPPKKKATMQEDIKLSGI 1354
>X63672-1|CAA45211.1| 1589|Drosophila melanogaster polyhomeotic
protein.
Length = 1589
Score = 70.9 bits (166), Expect = 1e-12
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 197 TQCTPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNRPLREWADKEDKE 376
T T S + K LPKAM+KPN+LTHVI+G++IQEA EPF V R + +ADK+
Sbjct: 1279 TSTTTTTTSSISNGSKDLPKAMIKPNVLTHVIDGFIIQEANEPFPVTR--QRYADKD--- 1333
Query: 377 NKLPSSDEPPRKKQMLEGGASLPRI 451
SDEPP+KK ++ L I
Sbjct: 1334 ----VSDEPPKKKATMQEDIKLSGI 1354
>BT016124-1|AAV37009.1| 1346|Drosophila melanogaster LD01444p protein.
Length = 1346
Score = 70.9 bits (166), Expect = 1e-12
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 197 TQCTPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNRPLREWADKEDKE 376
T T S + K LPKAM+KPN+LTHVI+G++IQEA EPF V R + +ADK+
Sbjct: 1036 TSTTTTTTSSISNGSKDLPKAMIKPNVLTHVIDGFIIQEANEPFPVTR--QRYADKD--- 1090
Query: 377 NKLPSSDEPPRKKQMLEGGASLPRI 451
SDEPP+KK ++ L I
Sbjct: 1091 ----VSDEPPKKKATMQEDIKLSGI 1111
>AL132797-4|CAB60096.1| 1359|Drosophila melanogaster
EG:BACN25G24.3,FBgn0004860;ph-d protein.
Length = 1359
Score = 70.9 bits (166), Expect = 1e-12
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 197 TQCTPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNRPLREWADKEDKE 376
T T S + K LPKAM+KPN+LTHVI+G++IQEA EPF V R + +ADK+
Sbjct: 1049 TSTTTTTTSSISNGSKDLPKAMIKPNVLTHVIDGFIIQEANEPFPVTR--QRYADKD--- 1103
Query: 377 NKLPSSDEPPRKKQMLEGGASLPRI 451
SDEPP+KK ++ L I
Sbjct: 1104 ----VSDEPPKKKATMQEDIKLSGI 1124
>AE014298-338|AAF45727.3| 1589|Drosophila melanogaster CG18412-PA
protein.
Length = 1589
Score = 70.9 bits (166), Expect = 1e-12
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 197 TQCTPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNRPLREWADKEDKE 376
T T S + K LPKAM+KPN+LTHVI+G++IQEA EPF V R + +ADK+
Sbjct: 1279 TSTTTTTTSSISNGSKDLPKAMIKPNVLTHVIDGFIIQEANEPFPVTR--QRYADKD--- 1333
Query: 377 NKLPSSDEPPRKKQMLEGGASLPRI 451
SDEPP+KK ++ L I
Sbjct: 1334 ----VSDEPPKKKATMQEDIKLSGI 1354
>AE014298-337|AAF45726.3| 1537|Drosophila melanogaster CG3895-PA
protein.
Length = 1537
Score = 70.9 bits (166), Expect = 1e-12
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 197 TQCTPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNRPLREWADKEDKE 376
T T S + K LPKAM+KPN+LTHVI+G++IQEA EPF V R + +ADK+
Sbjct: 1227 TSTTTTTTSSISNGSKDLPKAMIKPNVLTHVIDGFIIQEANEPFPVTR--QRYADKD--- 1281
Query: 377 NKLPSSDEPPRKKQMLEGGASLPRI 451
SDEPP+KK ++ L I
Sbjct: 1282 ----VSDEPPKKKATMQEDIKLSGI 1302
>BT022832-1|AAY55248.1| 216|Drosophila melanogaster IP13378p
protein.
Length = 216
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1
Query: 109 GDNVFCVCIHND-FGDHSVRSFRYINYV------QEHAMYSASYQPSRCTRQRAPQSYGE 267
GD F IH D FG +R+ ++++ Q M PS C +RAP+ Y E
Sbjct: 26 GDADFVDVIHTDVFGRGYLRAAGHVDFYPNFGAKQPGCMEENMQDPSSCNHERAPRFYAE 85
Query: 268 AEHT 279
+ +T
Sbjct: 86 SINT 89
>BT022826-1|AAY55242.1| 293|Drosophila melanogaster IP13278p
protein.
Length = 293
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1
Query: 109 GDNVFCVCIHND-FGDHSVRSFRYINYV------QEHAMYSASYQPSRCTRQRAPQSYGE 267
GD F IH D FG +R+ ++++ Q M PS C +RAP+ Y E
Sbjct: 103 GDADFVDVIHTDVFGRGYLRAAGHVDFYPNFGAKQPGCMEENMQDPSSCNHERAPRFYAE 162
Query: 268 AEHT 279
+ +T
Sbjct: 163 SINT 166
>BT022793-1|AAY55209.1| 389|Drosophila melanogaster IP13578p
protein.
Length = 389
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1
Query: 109 GDNVFCVCIHND-FGDHSVRSFRYINYV------QEHAMYSASYQPSRCTRQRAPQSYGE 267
GD F IH D FG +R+ ++++ Q M PS C +RAP+ Y E
Sbjct: 199 GDADFVDVIHTDVFGRGYLRAAGHVDFYPNFGAKQPGCMEENMQDPSSCNHERAPRFYAE 258
Query: 268 AEHT 279
+ +T
Sbjct: 259 SINT 262
>BT022790-1|AAY55206.1| 389|Drosophila melanogaster IP13478p
protein.
Length = 389
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1
Query: 109 GDNVFCVCIHND-FGDHSVRSFRYINYV------QEHAMYSASYQPSRCTRQRAPQSYGE 267
GD F IH D FG +R+ ++++ Q M PS C +RAP+ Y E
Sbjct: 199 GDADFVDVIHTDVFGRGYLRAAGHVDFYPNFGAKQPGCMEENMQDPSSCNHERAPRFYAE 258
Query: 268 AEHT 279
+ +T
Sbjct: 259 SINT 262
>AE014134-411|AAF51253.2| 575|Drosophila melanogaster CG31684-PA
protein.
Length = 575
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1
Query: 109 GDNVFCVCIHND-FGDHSVRSFRYINYV------QEHAMYSASYQPSRCTRQRAPQSYGE 267
GD F IH D FG +R+ ++++ Q M PS C +RAP+ Y E
Sbjct: 163 GDADFVDVIHTDVFGRGYLRAAGHVDFYPNFGAKQPGCMEENMQDPSSCNHERAPRFYAE 222
Query: 268 AEHT 279
+ +T
Sbjct: 223 SINT 226
>AY051962-1|AAK93386.1| 1487|Drosophila melanogaster LD42916p
protein.
Length = 1487
Score = 28.7 bits (61), Expect = 7.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1
Query: 309 WMTYPSITCVSMFGFTIALGSPLSCAAAW 223
W T P + C+ FG ++ +G+PL + +
Sbjct: 519 WATTPVLMCLLTFGVSVLMGNPLIASTTY 547
>AE014134-1458|AAF52639.1| 1487|Drosophila melanogaster CG7806-PA
protein.
Length = 1487
Score = 28.7 bits (61), Expect = 7.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1
Query: 309 WMTYPSITCVSMFGFTIALGSPLSCAAAW 223
W T P + C+ FG ++ +G+PL + +
Sbjct: 519 WATTPVLMCLLTFGVSVLMGNPLIASTTY 547
>BT023779-1|AAZ41788.1| 380|Drosophila melanogaster LD24968p
protein.
Length = 380
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 169 FRYINYVQEHAMYSASYQPSRCTR 240
F + Y++EH M QP RCTR
Sbjct: 229 FNSVAYLKEHMMRHTGEQPFRCTR 252
>AY089667-1|AAL90405.1| 321|Drosophila melanogaster RH38929p
protein.
Length = 321
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 169 FRYINYVQEHAMYSASYQPSRCTR 240
F + Y++EH M QP RCTR
Sbjct: 170 FNSVAYLKEHMMRHTGEQPFRCTR 193
>AY060956-1|AAL28504.1| 325|Drosophila melanogaster GM08802p
protein.
Length = 325
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 169 FRYINYVQEHAMYSASYQPSRCTR 240
F + Y++EH M QP RCTR
Sbjct: 229 FNSVAYLKEHMMRHTGEQPFRCTR 252
>AE014298-881|AAF46157.1| 380|Drosophila melanogaster CG3847-PA
protein.
Length = 380
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 169 FRYINYVQEHAMYSASYQPSRCTR 240
F + Y++EH M QP RCTR
Sbjct: 229 FNSVAYLKEHMMRHTGEQPFRCTR 252
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,798,540
Number of Sequences: 53049
Number of extensions: 631242
Number of successful extensions: 1911
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1905
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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