Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0889
         (639 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3B5 Cluster: Putative uncharacterized protein PFI016...    36   0.82 
UniRef50_UPI00006CAFE6 Cluster: Protein kinase domain containing...    33   4.4  
UniRef50_Q7N6P1 Cluster: Similarities with 2-amino-3-ketobutyrat...    33   4.4  

>UniRef50_Q8I3B5 Cluster: Putative uncharacterized protein PFI0160w;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFI0160w - Plasmodium falciparum
            (isolate 3D7)
          Length = 3135

 Score = 35.9 bits (79), Expect = 0.82
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = -3

Query: 220  RPQISQDFRPN--IGPVYILVKVTNSKI--NDMRPEDVVLIFLNNVCSNDLGYLN 68
            + Q  + FRPN  IGPV  ++K TNS+I  ND + +D  +   NN   N+L  LN
Sbjct: 1726 KDQKRESFRPNESIGPV--ILKTTNSRIIDNDKKEKDHPINIFNNSTFNNLNLLN 1778


>UniRef50_UPI00006CAFE6 Cluster: Protein kinase domain containing
           protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
           kinase domain containing protein - Tetrahymena
           thermophila SB210
          Length = 773

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -3

Query: 214 QISQDFRPNIGPVYILVKVTNSKINDMRPEDVVLIFLNNVCSNDLGYLN 68
           Q SQ  + +I   YIL K    KI + +P   +LI  NN C+ +LG ++
Sbjct: 386 QCSQQKQTSIKDCYILGKKEFIKIENQQPSPKILIQENNKCNQNLGQID 434


>UniRef50_Q7N6P1 Cluster: Similarities with 2-amino-3-ketobutyrate
           coenzyme A ligase; n=2; Gammaproteobacteria|Rep:
           Similarities with 2-amino-3-ketobutyrate coenzyme A
           ligase - Photorhabdus luminescens subsp. laumondii
          Length = 448

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -3

Query: 199 FRPNIGPVYILVKVTNSKINDMRPEDVVLIFLNNVCSNDLGYLNLIHKIH--ICY*SDDI 26
           F  N+ PV +  K ++  +N ++P       +     ND+GYL  I KIH  + Y +D +
Sbjct: 164 FTGNVNPVMVFDKYSHYSMNHLKPSCADETEVITAPHNDMGYLEDICKIHKKVVYVADGV 223

Query: 25  F 23
           +
Sbjct: 224 Y 224


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,656,137
Number of Sequences: 1657284
Number of extensions: 10082228
Number of successful extensions: 24356
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24351
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)