Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0889
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   1.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   3.8  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   3.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   3.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   3.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   3.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   3.8  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    22   3.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   3.8  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.7  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 485 SIDNTIAIDNNVN--FSSLPGILCPDSLSTSVFVGCYCYH 598
           S D    + ++VN  F  +  I C    +T VF  CYCY+
Sbjct: 519 SHDKLCDVCDSVNRIFGFIIIIGCLIQFNTIVFAFCYCYY 558



 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 548 CPDSLSTSVFVGCYCYH 598
           C    +T VF  CYCY+
Sbjct: 261 CLIQFNTIVFSFCYCYY 277


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 181 PVYILVKVTNSKINDMRPEDVVLI 110
           P+Y L    N  +N + PEDV L+
Sbjct: 68  PIYKLDVCGNGGVNLLNPEDVELV 91


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 181 PVYILVKVTNSKINDMRPEDVVLIFLNNVCSNDLGYLNLIH 59
           P+Y L     +  N + PED  L+  N          NL+H
Sbjct: 75  PIYKLNAAHLAAANILSPEDCELVLSNPTHMEKSAIYNLLH 115


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 181 PVYILVKVTNSKINDMRPEDVVLIFLNNVCSNDLGYLNLIH 59
           P+Y L     +  N + PED  L+  N          NL+H
Sbjct: 75  PIYKLNAAHLAAANILSPEDCELVLSNPTHMEKSAIYNLLH 115


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 586 TTNKNRSTKRIWTKYSRKRT 527
           T N N  TKR  T Y+R +T
Sbjct: 213 TVNANGETKRQRTSYTRYQT 232


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 586 TTNKNRSTKRIWTKYSRKRT 527
           T N N  TKR  T Y+R +T
Sbjct: 213 TVNANGETKRQRTSYTRYQT 232


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 586 TTNKNRSTKRIWTKYSRKRT 527
           T N N  TKR  T Y+R +T
Sbjct: 213 TVNANGETKRQRTSYTRYQT 232


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 586 TTNKNRSTKRIWTKYSRKRT 527
           T N N  TKR  T Y+R +T
Sbjct: 213 TVNANGETKRQRTSYTRYQT 232


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 586 TTNKNRSTKRIWTKYSRKRT 527
           T N N  TKR  T Y+R +T
Sbjct: 169 TVNANGETKRQRTSYTRYQT 188


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 586 TTNKNRSTKRIWTKYSRKRT 527
           T N N  TKR  T Y+R +T
Sbjct: 213 TVNANGETKRQRTSYTRYQT 232


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 586 TTNKNRSTKRIWTKYSRKRT 527
           T N N  TKR  T Y+R +T
Sbjct: 1   TVNANGETKRQRTSYTRYQT 20


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 586 TTNKNRSTKRIWTKYSRKRT 527
           T N N  TKR  T Y+R +T
Sbjct: 213 TVNANGETKRQRTSYTRYQT 232


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 207 DIWGLHILFLSVYVT 251
           DI+G  ILFL  Y T
Sbjct: 223 DIFGWQILFLITYAT 237


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 207 DIWGLHILFLSVYVT 251
           DI+G  ILFL  Y T
Sbjct: 223 DIFGWQILFLITYAT 237


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 181 PVYILVKVTNSKINDMRPEDVVLI 110
           P+Y L       +N + PEDV L+
Sbjct: 68  PIYKLDVCGTGGVNLLNPEDVELV 91


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 541 NTLSRFS*YFGFCWLLLLPFVEKSFV 618
           NT+  F+  FG  +LL++ +    FV
Sbjct: 191 NTVDDFNDIFGISFLLIISYSTLHFV 216


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 278 FRMMIVRCLTFNCSSFMHPLFFAITAASEHKSSK 379
           F  ++  CLT    S    L+FAI     + +SK
Sbjct: 258 FCSLVALCLTMYKLSLTEDLYFAIYEMHWYDASK 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,168
Number of Sequences: 336
Number of extensions: 2948
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)