Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0887
(612 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 125 3e-29
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 101 5e-22
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 5e-16
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 81 9e-16
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 80 2e-15
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 73 1e-13
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 64 1e-10
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 62 5e-10
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 58 7e-09
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 56 3e-08
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 54 1e-07
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 51 9e-07
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 51 9e-07
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 51 9e-07
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 49 3e-06
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 48 5e-06
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 46 3e-05
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 45 4e-05
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 45 6e-05
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 45 6e-05
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 44 7e-05
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 36 9e-05
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 44 1e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 43 2e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 42 5e-04
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 42 5e-04
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 42 5e-04
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 40 0.002
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.008
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 38 0.008
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 37 0.011
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 36 0.026
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 35 0.060
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 34 0.079
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.079
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 34 0.10
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 33 0.14
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 33 0.18
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.18
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 32 0.32
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 31 0.74
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 31 0.97
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_38604| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 29 2.2
SB_8368| Best HMM Match : VWA (HMM E-Value=0) 29 2.2
SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05) 29 3.0
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 29 3.0
SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2) 29 3.0
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 29 3.9
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 29 3.9
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 29 3.9
SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 28 5.2
SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37) 28 5.2
SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017) 28 5.2
SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) 28 6.9
SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 28 6.9
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_1065| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_56231| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_43316| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_23339| Best HMM Match : I-set (HMM E-Value=1.3e-07) 27 9.1
SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_15580| Best HMM Match : Pentapeptide (HMM E-Value=0.2) 27 9.1
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 125 bits (301), Expect = 3e-29
Identities = 66/168 (39%), Positives = 95/168 (56%), Gaps = 1/168 (0%)
Frame = +1
Query: 112 GDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 291
G S D N DD KLFVGGLS+ETT + L+++F YGE+ +++K D TGR RG
Sbjct: 12 GTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRG 71
Query: 292 FAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 471
FAF+ FK D + I K R KIFVGGL E SD++IR +F +
Sbjct: 72 FAFVQFKHQSEADAIDPKPAAPIG------KPPHLRVKKIFVGGLKPETSDEKIREYFGK 125
Query: 472 -FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 612
+ + E+E + + N+R+GFCF++F+SE V+ + +T I G +
Sbjct: 126 AYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNK 173
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFG-AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 339
+K+FVGGL ET+D+++R++FG AY ++ I T+ ++ R RGF F+ F + +++DK+
Sbjct: 103 KKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKIC 162
Query: 340 AAGEHTINNKKVDPKKA 390
H I KV+ K+A
Sbjct: 163 ETQFHNIEGNKVEVKRA 179
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 101 bits (242), Expect = 5e-22
Identities = 49/154 (31%), Positives = 101/154 (65%), Gaps = 19/154 (12%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 339
RK+F+GGL+W TT++ L+D+F +G I + + +K D GRSRGF F+ +++ +S+++V+
Sbjct: 50 RKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRD---GRSRGFGFVTYESSDSVNEVL 106
Query: 340 AAGEHTINNKKVDPKK-----------AKARHGKIFVGGLSSEISDDEIRNFFSE----- 471
+H +++++++PK+ A ++ KIFVGGL+S +++I+ +F+
Sbjct: 107 KKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKN 166
Query: 472 -FGTILEVEMPFDKTKNQR-KGFCFITFESEQVV 567
G +++V++ D+ +R +GF F+TF+++++V
Sbjct: 167 GMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIV 200
Score = 58.0 bits (134), Expect = 6e-09
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFGAY------GEIESINVKTD-PNTGRSRGFAFIVFKAPE 321
RK+FVGGL+ T +++++++F + GE+ +++K D N R RGFAF+ F E
Sbjct: 139 RKIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDE 198
Query: 322 SIDKVMAAGEHTINNKKVDPKKAK 393
++KV A H I K+ + KKA+
Sbjct: 199 IVEKVCAMKYHEIRMKQCEVKKAE 222
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/69 (34%), Positives = 44/69 (63%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 585
KIF+GGL+ +++ ++++FS++GTI V+ K + +GF F+T+ES VN++LK
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTI--VDCVIMKRDGRSRGFGFVTYESSDSVNEVLKK 108
Query: 586 PKRTIGGKE 612
+ +E
Sbjct: 109 KDHVLDDRE 117
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 85.8 bits (203), Expect = 2e-17
Identities = 55/174 (31%), Positives = 97/174 (55%), Gaps = 21/174 (12%)
Frame = +1
Query: 154 DDDR--KLFVGGLSWETTDKELRDHF-----GAYGEIESINVKTDPNTGRSRGFAFIVFK 312
DD + KLFVGGL+ +TT++ +R +F G+ ++ S+++ P G+SR F F+ F
Sbjct: 3 DDSKLMKLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPE-GKSRKFCFVEFS 61
Query: 313 -APESIDKVMAAGE-HTINNKKVDPKKAKARHG----------KIFVGGLSSEISDDEIR 456
+ ID ++ E H+I+NK+V+ K+A R K+F+GGL E S+++++
Sbjct: 62 NGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDVK 121
Query: 457 NFFSEFGTI--LEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 612
+ LE++M D+ N+ KG+CF+ F +E +V+ L + GK+
Sbjct: 122 TALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKD 175
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKT--DPNTGRSRGFAFIVFKAPESIDKV 336
+KLF+GGL E ++++++ + +K D T + +G+ F+ F +DK+
Sbjct: 104 KKLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKL 163
Query: 337 MAAGEHTINNKKVDPKKA 390
+ K V+ KKA
Sbjct: 164 YLVRHIQVKGKDVEMKKA 181
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 81.4 bits (192), Expect = 5e-16
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 18/178 (10%)
Frame = +1
Query: 130 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 309
N E D KLFVGGL+ ETT++ LR++F AYGE+ + V D T +SRGF ++ F
Sbjct: 3 NRQENTNNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTF 62
Query: 310 ---KAPESI--DKVMAAGEHTINNKKVDPKKAKARHG----------KIFVGGLSSEISD 444
K ++ DKV G H I+ K+V+ K+A R KIFVGGL + +
Sbjct: 63 ADYKVTRNVLKDKV-ENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATK 121
Query: 445 DEIRNFFSEF--GTILEVEMPFDK-TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 609
++I+ + +V++ K + + +GF F+ +E ++L K + GK
Sbjct: 122 EDIQEAIESLLEEKVDKVDLIMKKEDETKHRGFAFVELNNEDQADELCCVKKIHVKGK 179
Score = 41.5 bits (93), Expect = 5e-04
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Frame = +1
Query: 55 FAQDITTDNQLNGNAENGGG--DSQDHNSAEAPGRDDD--------RKLFVGGLSWETTD 204
FA T N L ENG D ++ A RDD+ +K+FVGGL + T
Sbjct: 62 FADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATK 121
Query: 205 KELRDHFGAYGE--IESINV--KTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 372
+++++ + E ++ +++ K + T + RGFAF+ + D++ + + K
Sbjct: 122 EDIQEAIESLLEEKVDKVDLIMKKEDET-KHRGFAFVELNNEDQADELCCVKKIHVKGKM 180
Query: 373 VDPKKAKAR 399
V+ KKA R
Sbjct: 181 VEAKKATPR 189
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 80.6 bits (190), Expect = 9e-16
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Frame = +1
Query: 211 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 390
LR HF +GE++ V DP T RSRGF F+ FK P+++D V+ +G +++D KK
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGA-----QELDGKKM 178
Query: 391 KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF-ITFESEQVV 567
KIF+GGLS+ S+++++ +FS+FG + E + K++ + +
Sbjct: 179 VTTTKKIFIGGLSTNTSEEDMKKYFSQFGKV-SCEYETEDVKDELAAVLISVHSNGTHIT 237
Query: 568 NDLLKTPKRT 597
N TP +T
Sbjct: 238 NQTPSTPNQT 247
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +1
Query: 430 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 609
++ S + +R F +FG + E + D + +GF F+TF+ + V+ +L + + + GK
Sbjct: 117 TQASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK 176
Query: 610 E 612
+
Sbjct: 177 K 177
Score = 32.3 bits (70), Expect = 0.32
Identities = 9/27 (33%), Positives = 22/27 (81%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFGAYGEI 243
+K+F+GGLS T++++++ +F +G++
Sbjct: 183 KKIFIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFGAYGE-IESIN-VKTDPNTGRSRGFAFIVFKAPESIDKV 336
R +FVG L T + + ++F GE +E + ++T +G+S+GFAF+ + E+++ V
Sbjct: 42 RTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRT--LSGKSKGFAFVRLRKKEAVESV 99
Query: 337 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 516
+ +H I+N V +K + K+ + + S I + +I FS G I V +P +
Sbjct: 100 LGRDDHVIDNSDVSMEKQDT-YRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKT 158
Query: 517 NQRKGFCFITFESEQVVNDLLKTPKRTIGG 606
+RKG C +TF S +++K K I G
Sbjct: 159 KERKGHCIVTFASVTEAFEVVKKRKHHIHG 188
Score = 50.8 bits (116), Expect = 9e-07
Identities = 30/162 (18%), Positives = 76/162 (46%), Gaps = 2/162 (1%)
Frame = +1
Query: 124 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 303
D++ +D RK+ + + + ++ +HF + GEI S+ + + T +G +
Sbjct: 108 DNSDVSMEKQDTYRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIV 167
Query: 304 VFKAPESIDKVMAAGEHTINNKKV--DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 477
F + +V+ +H I+ + + + K+ + L ++ D+I+N FG
Sbjct: 168 TFASVTEAFEVVKKRKHHIHGYDIITEYYMNLKQPKKLCLKNLPYNVTVDQIKNRMDGFG 227
Query: 478 TILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIG 603
++E+++ +++ + F+ F +E + +++K K + G
Sbjct: 228 GLMEIDLAVMPDRSECE--AFLIFSNEDSIREIMKQGKISFG 267
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 79.8 bits (188), Expect = 2e-15
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Frame = +1
Query: 169 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 348
L V GL + TT+ E++++F +GEI+ VK DPNT RSRGF F+ FK E V++
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLST- 175
Query: 349 EHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 513
H I + + PK+ K+FVG L ++ + +F++FG + +V +P
Sbjct: 176 SHRIQGRLCEVRLPRPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIP---- 231
Query: 514 KNQRKGFCFITFES 555
+ F F+TF S
Sbjct: 232 -KPFRHFGFVTFAS 244
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +1
Query: 403 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 582
G + V GL ++ E++ +F+ FG I E+ D + +GF F+ F+ ++ ++L
Sbjct: 115 GDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLS 174
Query: 583 TPKRTIG 603
T R G
Sbjct: 175 TSHRIQG 181
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 294
+KLFVG L TT+K L ++F +GE+ + + P R GF
Sbjct: 199 KKLFVGRLPESTTEKTLMEYFAQFGEVTDVYI---PKPFRHFGF 239
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/113 (35%), Positives = 64/113 (56%)
Frame = +1
Query: 157 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 336
+ R +FVGGL+ T ++ L+D+F +GE+ES+ + G SR + F++FK + K
Sbjct: 78 NSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFK-DDGPSKE 135
Query: 337 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVE 495
+ H IN K VD K++ I+VGGL S ++ +R F +FG I V+
Sbjct: 136 VLKKSHVINGKTVDVGKSR-NFRVIYVGGLPSHFTEQTVREHFKKFGVIEAVK 187
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +1
Query: 160 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 339
+R LFV LS +T + ++ +F YG++ +++ TD TG+S+G + + P +++K++
Sbjct: 318 ERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKIL 377
Query: 340 AAGEHTINNKKV 375
H I +V
Sbjct: 378 EEPVHVIGKSQV 389
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/118 (21%), Positives = 52/118 (44%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 342
R ++VGGL T++ +R+HF +G IE++ + + G G + E + +
Sbjct: 157 RVIYVGGLPSHFTEQTVREHFKKFGVIEAVKFIENTSVGAKTGXXXXE-EDQEILGCPVT 215
Query: 343 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 516
+ D + K+ V L + + DE+R +F + G + +++ + K
Sbjct: 216 VRARSGKESNEDLMAKVIQSKKLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEK 273
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = +1
Query: 361 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 540
N+ PK + +FVGGL+S ++ ++++F +FG + V + + + F
Sbjct: 66 NSTLPSPKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRI-MRTFLGYSRNYGF 124
Query: 541 ITFESEQVVNDLLKTPKRTIGGK 609
+ F+ + ++LK I GK
Sbjct: 125 VLFKDDGPSKEVLK-KSHVINGK 146
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/155 (21%), Positives = 80/155 (51%), Gaps = 17/155 (10%)
Frame = +1
Query: 166 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES------- 324
+++VG +++E ++ +R F +G I I++ DP + +GFAF+ + PE+
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQ 162
Query: 325 IDKVMAAGEHT-----INNKKVDP-----KKAKARHGKIFVGGLSSEISDDEIRNFFSEF 474
++ V+ G + N + P ++ ++ +I++ + ++ +D+I++ F F
Sbjct: 163 MNGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAF 222
Query: 475 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 579
G ++ + + + KG+ FI +E++Q ND +
Sbjct: 223 GKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAI 257
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/57 (28%), Positives = 35/57 (61%)
Frame = +1
Query: 382 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 552
++A A +++VG ++ E+ ++ IR F FG I ++++ +D + KGF F+ ++
Sbjct: 95 QRALALMCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYD 151
Score = 35.5 bits (78), Expect = 0.034
Identities = 11/60 (18%), Positives = 36/60 (60%)
Frame = +1
Query: 166 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 345
++++ + + + +++ F A+G++ ++ +P TG+ +G+ FI ++ +S + +A+
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 61.7 bits (143), Expect = 5e-10
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 7/185 (3%)
Frame = +1
Query: 49 DNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFG 228
D A +T+ ++ D D + L++ GL TTD +L
Sbjct: 62 DKKAYSVTSSQSPGLSSGRSSSDRMDSLPDTGEEKLSKTNLYIRGLKANTTDDDLVRLCH 121
Query: 229 AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-- 402
YG I S D +T +G+ F+ F++P S K +AA + NK + + AK +
Sbjct: 122 KYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAA----LVNKGIQAQMAKQQEQD 177
Query: 403 -GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES----EQVV 567
+++ L + + N FS++G ++ + DK N KG F ES EQV+
Sbjct: 178 PTNLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDTNS-KGVGFARMESAEKCEQVI 236
Query: 568 NDLLK 582
D K
Sbjct: 237 KDFNK 241
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/174 (22%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Frame = +1
Query: 85 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 264
++ N++ D +H E D+ L + + + ++++ FG G + S +
Sbjct: 1 MDDNSKAMAEDINNHEPMENGTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIR 60
Query: 265 DPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNK--KVD---PKKAKARHGKIFVGGL 426
D TG+S G+AF+ + P+ +K V + NK KV P + ++ +++ GL
Sbjct: 61 DRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARPSSTEIKNANLYISGL 120
Query: 427 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF----ESEQVVNDL 576
++ ++E+ F FG I+ ++ D + +G F+ F E++ ++DL
Sbjct: 121 PKDMKEEEVEALFKPFGKIITSKVLKD-VSGEGRGTGFVRFDKRCEAQTAIDDL 173
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 57.6 bits (133), Expect = 7e-09
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Frame = +1
Query: 151 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 330
R+ D ++VGGL + ++ + + F G + ++++ D T +G+ F+ F E D
Sbjct: 9 RNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDAD 68
Query: 331 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILE 489
+ + K + KA A + +F+G L +E+ + + + FS FG IL+
Sbjct: 69 YAIKVMNMIKVYGKPIRVNKASAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQ 128
Query: 490 V-EMPFDKTKNQRKGFCFITFES 555
++ D KGF FI F S
Sbjct: 129 TPKIMRDSDTGNSKGFAFINFAS 151
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +1
Query: 133 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVF 309
SA D LF+G L E +K L D F A+G I ++ + D +TG S+GFAFI F
Sbjct: 90 SAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINF 149
Query: 310 KAPESIDKVMAA--GEHTIN 363
+ ++ D + A G++ N
Sbjct: 150 ASFDASDAAIEAMNGQYLCN 169
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +1
Query: 379 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 558
P + + I+VGGL ++S+ I F + G ++ V MP D+ +G+ F+ F E
Sbjct: 5 PIAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGE 64
Query: 559 QVVNDLLK 582
+ + +K
Sbjct: 65 EDADYAIK 72
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Frame = +1
Query: 139 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 318
E+ D R +F L+ ++L + F G++ + + +D N+ RS+G A+I F
Sbjct: 138 ESAEEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDK 197
Query: 319 ESIDKVMA-AGEHTI-------------NNKKVDPKKAKARHG--KIFVGGLSSEISDDE 450
++ + +G+ + N + ++ K G +++VG L I++
Sbjct: 198 SAVPLAIGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLGPTRLYVGSLHFNITEAM 257
Query: 451 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 561
++ F FGT+ V++ +D N+ KG+ F+ F +
Sbjct: 258 VKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAE 294
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +1
Query: 166 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 339
+L+VG L + T+ ++ F +G ++S+ + D T RS+G+ F+ F+ E+ + M
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAM 300
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 53.6 bits (123), Expect = 1e-07
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 17/164 (10%)
Frame = +1
Query: 169 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP---ESIDKVM 339
L+VG L+ + T+ L + F G + SI V D T RS G+A++ F+ P +++ +
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEAIA 74
Query: 340 AAGEHTINNKKV------DPKKAKARHG-------KIFVGGLSSEISDDEIRNFFSEFGT 480
+N+KKV K+ + G ++V ++ D++++ +E G
Sbjct: 75 RVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGK 134
Query: 481 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK-RTIGGK 609
I+ +++ D + + KGF F++FE+ + + + + IGG+
Sbjct: 135 IVSLKVMTD-PEGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGR 177
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +1
Query: 169 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 339
L++ L D+ LR+ F YG I S V D + G S+GF F+ F +PE K +
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAV 269
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 50.8 bits (116), Expect = 9e-07
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Frame = +1
Query: 106 GGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR 282
GGG +++ E PG R LFVG + TT +L++ F YGE+ +++K P
Sbjct: 231 GGGSISNYSEDEFDPGCT--RTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPG--- 285
Query: 283 SRGFAFIVF-KAPESIDKVMAAGEHTINNKKVDPKKAKARH-GKIFVGGLSSEISDDEIR 456
+ +AF+ F + +I + +V K I+VGG+++ +S+ ++
Sbjct: 286 NNPYAFVQFAELSSAIQARRKMDREYVGRNRVKVGFGKVNPINTIWVGGVTNSLSEQQVE 345
Query: 457 NFFSEFGTILEV 492
F +G + +V
Sbjct: 346 RHFGRYGRVTKV 357
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 157 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV--KTDPNTGRSRGFAFI 303
+ R L+VG L ++++ HF YG +ES+ + K GR+ F+
Sbjct: 4 ETRHLWVGNLPENIREEDIVKHFTRYGRVESVKILPKRSAEGGRASFVDFV 54
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 169 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPN 273
++VGG++ +++++ HFG YG + + + N
Sbjct: 330 IWVGGVTNSLSEQQVERHFGRYGRVTKVVINRVTN 364
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 50.8 bits (116), Expect = 9e-07
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 585
K+FVGG+ E DD +R FF++FG I E + D+ + KG+ F+T + K
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKN 70
Query: 586 PKRTIGGKE 612
+ I G++
Sbjct: 71 KRPMIEGRQ 79
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +1
Query: 166 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 330
KLFVGG+ +E+ D LR F +GEI V D T +S+G+ F+ ++ +
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAE 65
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 576
+IFV G + E ++ E+R FF E+G + E ++ DK KG+ FITFES++V + L
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDK-HGVSKGYAFITFESQEVADGL 64
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +1
Query: 151 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 330
+D +++FV G + ETT+ ELR F YG ++ + D + G S+G+AFI F++ E D
Sbjct: 4 QDISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKH-GVSKGYAFITFESQEVAD 62
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 50.4 bits (115), Expect = 1e-06
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 11/189 (5%)
Frame = +1
Query: 37 MANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDR---KLFVGGLSWETTDK 207
+ + + DITT + G G + PG ++ ++F+G + + +
Sbjct: 114 LLDRTGYTLDITTGQRKYGGPPPGW-------EGKPPGTGSEKVCSQVFIGKVPRDCFED 166
Query: 208 ELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK 387
EL F G I + DP +G ++GFAF F + + ++NK++ P K
Sbjct: 167 ELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAV----KKLDNKEIRPGK 222
Query: 388 -----AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE---VEMPFDKTKNQRKGFCFI 543
+ ++FVG + S EI FS+ L+ V + D+ K + +GF F+
Sbjct: 223 RLGVCISVANSRLFVGSIPKTKSKQEILEEFSKVTNGLDDVIVYLSADQ-KGKNRGFAFL 281
Query: 544 TFESEQVVN 570
+ES Q +
Sbjct: 282 EYESHQAAS 290
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 582
++F+G + + +DE+ F E G I + + D KGF F TF ++ + +K
Sbjct: 153 QVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVK 211
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/62 (32%), Positives = 39/62 (62%)
Frame = +1
Query: 142 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 321
A G + RKL++G L++ + + E+ F +G +E +++ D +GRSRGF F++ ++ +
Sbjct: 2 ADGENRGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSAD 60
Query: 322 SI 327
I
Sbjct: 61 QI 62
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 397 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVND 573
R K+++G L+ + EI F EFG + +V++ DK + +GF F+ +S +Q+
Sbjct: 7 RGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPA 65
Query: 574 LLKTPKRTIGGK 609
+ K + ++GG+
Sbjct: 66 IEKMNQSSVGGR 77
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/104 (24%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +1
Query: 40 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRD--DDRKLFVGGLSWETTDKEL 213
+++D + ++ D+ N ++ D++S + D + +F+ LS+++T K +
Sbjct: 373 SDDDEDVKHMSKDDNNNEKSDEDDASEDDNHSQRSKPSDVKEGLTVFIRNLSFDSTQKNI 432
Query: 214 RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 345
+ F +G+I V D T S+G AF+ +++ ES+ + +AA
Sbjct: 433 TNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAA 476
Score = 41.1 bits (92), Expect = 7e-04
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Frame = +1
Query: 118 SQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 297
S+ + +AP D R + + GL T+K++ GE+E + +
Sbjct: 145 SKSKSLRKAPQTDAGRTVILSGLPASITEKQIYKRCRKLGEVEKTIFPVAGHDSPTASLL 204
Query: 298 FIVFK-APESIDKVMAAGEHTINNKKVDPKKAK------ARHGKIFVGGLSSEISDDEIR 456
F +K A +++ K+ + K V K K ++ ++ + L+ ++ ++
Sbjct: 205 FKSYKDARQAVAKLNGKTLKGVKVKAVIESKDKSSSPKGSKKSRLIIRNLAFNCTEAILK 264
Query: 457 NFFSEFGTILEVEMPFDKT--KNQRKGFCFITF 549
FS FG + E +P K +N++ GF F+ F
Sbjct: 265 ETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQF 297
Score = 34.7 bits (76), Expect = 0.060
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 361 NNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 537
+N K + + G +F+ LS + + I N F +FG I ++ D KG
Sbjct: 401 DNHSQRSKPSDVKEGLTVFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSA 460
Query: 538 FITFESEQVVNDLL 579
F+ + S + V L
Sbjct: 461 FVKYRSAESVTQCL 474
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/98 (21%), Positives = 48/98 (48%)
Frame = +1
Query: 154 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 333
D R +F+G L ++ ++ LR+ F G +ES+ + D TG +GF +++F++ +++
Sbjct: 53 DHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVF 112
Query: 334 VMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDD 447
+ +K+ +K + F+ + D+
Sbjct: 113 ALKMNNAEFKGRKIRVFPSKDKPQTEFISHIQVRFRDN 150
Score = 47.6 bits (108), Expect = 8e-06
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Frame = +1
Query: 298 FIVFKAPESIDKVMAAGEHTIN--NKKVD---PKKAKARHGKIFVGGLSSEISDDEIRNF 462
++V+KA E+ ++ +A+ I+ + +VD KA +F+G L +I ++ +R
Sbjct: 16 YVVYKAAENANQAIASNGEEIDGFHIRVDLASNDKAHDHQRSVFIGNLPFDIEEEPLREL 75
Query: 463 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 612
F+ G + V + D+ KGF ++ FES+ V LK G++
Sbjct: 76 FTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRK 125
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 47.6 bits (108), Expect = 8e-06
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Frame = +1
Query: 166 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 345
++F+G + + + EL GEI ++ DP TG ++GFAF F S + +
Sbjct: 154 EVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAIT- 212
Query: 346 GEHTINNKKVDPKK----AKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTILE 489
T+N+K + P + K+R + ++FV G+ S +EI FS+ T L+
Sbjct: 213 ---TLNDKDIRPGRRLAICKSRSNSRLFVKGIPKRKSKEEIFQEFSKVTTDLQ 262
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 558
++F+G + + +DE+ + G I E + D KGF F TF +
Sbjct: 154 EVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQ 204
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 21/87 (24%)
Frame = +1
Query: 286 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA---------------------KARH 402
+GF F+ F+ P +I+ V+A H ++ K +DPK A A
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTGAVMGGPQRGSAND 201
Query: 403 GKIFVGGLSSEISDDEIRNFFSEFGTI 483
GK+F+GGL+ ++++++ +FS +G +
Sbjct: 202 GKVFIGGLAFGTTEEDLKEYFSTYGMV 228
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = +1
Query: 148 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIE 246
G +D K+F+GGL++ TT+++L+++F YG +E
Sbjct: 197 GSANDGKVFIGGLAFGTTEEDLKEYFSTYGMVE 229
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +1
Query: 70 TTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIES 249
T DN+ +G+ ++ D D + + DDD GG + ++ +H A G +E+
Sbjct: 428 TGDNR-DGDDDDDDDDDDDDDDDDDDDDDDDDDDDGGGDDDDDYERGAINHSNA-GPLEN 485
Query: 250 INVKTDPNTGRSRGFAFIVFKAPESI 327
+ + TD NTG+ R F F+ F +P S+
Sbjct: 486 VRIPTDKNTGQQRSFGFVEFSSPVSV 511
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +1
Query: 265 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 399
D T R RGF F+ F++ S DK H INNKKV+ KKA+ +
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 502 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 612
FDK + +GF F+TFESE + T I K+
Sbjct: 4 FDKATQRHRGFGFVTFESENSADKACDTQYHLINNKK 40
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +1
Query: 412 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 552
+VGGL+ E+ + + F FG I +V++P D T ++ +GF F+ FE
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFE 54
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 321
R +VGGL+ E +K L F +G+I + + D T + RGF F+ F+ E
Sbjct: 5 RVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAE 57
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Frame = +1
Query: 106 GGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 276
GGG+ P +D R LFVG L + ++LR F +G + +++K P
Sbjct: 215 GGGNFTPPQQEYIPPEEDPKATRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKR-PAR 273
Query: 277 GRSRGFAFIVFKAPESIDKVMAAGEHTI---NNKKVDPKKAKARHGKIFVGGLSSEISDD 447
G+ +AF+ F + K A + N+ K+ +++ + +++VGGL IS
Sbjct: 274 GQGNTYAFVKFADLDVAAKAKCAMQGQCIGRNHIKIGYGRSQ-QTTRLWVGGLGPWISIP 332
Query: 448 EIRNFFSEFGTILEVE 495
E+ F FG I ++
Sbjct: 333 ELEREFDRFGAIRRID 348
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 376 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 549
DPK + +FVG L + IS ++R F +FG +L+V++ + Q + F+ F
Sbjct: 232 DPKATRT----LFVGNLETGISCQDLRLSFEKFGVVLDVDIK-RPARGQGNTYAFVKF 284
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Frame = +1
Query: 262 TDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKA----RHGKIFVGGL 426
T P R R + V K+P K ++ + ++ P++ K + K++V L
Sbjct: 1106 TKPRPSR-RSLSKSVSKSPSPARKGKRSSSSSSSRSRSRSPRRRKRSPTPKPTKLYVAHL 1164
Query: 427 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 582
+ ++ D ++ FS +G + V++P D+T N +GF ++ + + LK
Sbjct: 1165 TRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALK 1216
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 166 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 339
KL+V L+ +++ F YG ++++++ TD SRGFA++ + PE +K +
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKAL 1215
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 367 KKVDPK--KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 540
KK+ PK + + G I++G + ++EI+ FF +FGT+ + + K + KG+ F
Sbjct: 84 KKIKPKGDEDELSPGVIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAF 143
Query: 541 ITFESEQV 564
+ F ++V
Sbjct: 144 VEFACDEV 151
Score = 34.3 bits (75), Expect = 0.079
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK----LFVGGLSWETTDKE 210
N+ N +DI L+ + + + +D P D+D +++G + + E
Sbjct: 57 NSVNTTKDINATLALDSDKQK---EFEDKVKKIKPKGDEDELSPGVIYLGHIPHGFFENE 113
Query: 211 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH 354
++ F +G + I + + RS+G+AF+ F A + + K+ A H
Sbjct: 114 IKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEF-ACDEVAKIAADTMH 160
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 44.4 bits (100), Expect = 7e-05
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = +1
Query: 169 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 345
L V + + TD+ R F A + + + +G S GF F+ + E K +
Sbjct: 49 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKL 108
Query: 346 GEHTINNK--KV---DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 510
TI NK KV P + ++V + ++ + E R F +G I+ + DK
Sbjct: 109 NGFTIGNKVLKVAFSRPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDK 168
Query: 511 TKNQRKGFCFITFESE 558
+ KG F+ ++ +
Sbjct: 169 STGLPKGCGFVLYDKK 184
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 385 KAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 561
K++A G ++V + + + + I F + G + +V++ +D + Q KGFCF+T +++
Sbjct: 268 KSQAPPGCTLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQE 327
Query: 562 VVNDLLKT 585
+ ++T
Sbjct: 328 EAQNAIQT 335
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 145 PGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 309
PG D+ + L+V + + + E R F AYG I + + D +TG +G F+++
Sbjct: 125 PGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLY 181
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 157 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 336
D R +++ + L FG YG IE +++ TG+S+GF ++ ++ ES +
Sbjct: 61 DQRTIYIRDFRPDIRKSSLESVFGPYGAIEDLSI-IRTQTGKSKGFGYVTYENAESAQRA 119
Query: 337 MAAGEHTINNKKV--DPK 384
+ AG H I+ K V +PK
Sbjct: 120 L-AGTHIIDGKWVIAEPK 136
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 35.5 bits (78), Expect = 0.034
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 157 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 258
DDRKLFVG +S +++LR F +G IE + V
Sbjct: 212 DDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTV 245
Score = 31.9 bits (69), Expect(2) = 9e-05
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 130 NSAEAPGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 288
N RD + KLFVG + +K+LR F YG+I + + D TG+ +
Sbjct: 158 NGGTTSVRDSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
Score = 31.5 bits (68), Expect(2) = 9e-05
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIRNFFSEFGTILEV 492
K+FVG +S ++++R FS FGTI E+
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEEL 243
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +1
Query: 145 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 324
P D L V L++ TT ++L+ F YG++ I + D NT SRGFAF+ F
Sbjct: 10 PEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRD 69
Query: 325 IDKVM 339
+ M
Sbjct: 70 AEDAM 74
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/59 (32%), Positives = 37/59 (62%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 582
+IF G L SE++D+ + F+++ + L+ ++ DK N+ KG+ F++F+ ND +K
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDP---NDFIK 273
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +1
Query: 157 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 336
+D ++F G L E TD+ L F Y + D + +S+G+ F+ FK P K
Sbjct: 215 NDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKA 274
Query: 337 M 339
M
Sbjct: 275 M 275
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Frame = +1
Query: 157 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 336
++ K ++G L ++ + +L+D F Y ++ + V +D T R RGFAF+ F + ++++
Sbjct: 228 EECKCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDA 286
Query: 337 ---MAAGEHTINNKKVDPKKAKARHGKIFVGGLSS 432
+ E + KV+ +++ + G GG S
Sbjct: 287 INELDGQEFDGRSMKVNQARSREQRGGGRGGGYRS 321
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/58 (24%), Positives = 38/58 (65%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 579
K ++G L ++++ ++++ FS + +++V++ D+ + +GF F+TF S++ + D +
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRYD-VVDVQVISDRETQRPRGFAFVTFGSKKNMEDAI 287
Score = 35.1 bits (77), Expect = 0.045
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 247 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM 339
S+ V TD TGR RGF F+ F + + +DK +
Sbjct: 37 SVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +1
Query: 157 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 336
++ + ++G LS+ ++ L + F ++ + V TD TGR RGF F+ F + E ++K
Sbjct: 3 EEYRCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKA 61
Query: 337 M 339
+
Sbjct: 62 I 62
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/52 (23%), Positives = 29/52 (55%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 561
+ ++G LS + + + F +++V++ D+ + +GF F+TF S++
Sbjct: 6 RCYIGNLSYSVDEQALEEKFHGCD-VVDVKVITDRETGRPRGFGFVTFGSKE 56
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 169 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 345
++VG L + T+ +L F YG++ + + D T SRG AFI+F +S +AA
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAA 70
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 41.5 bits (93), Expect = 5e-04
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 561
+FVG + E S+++++ FSE G ++ + FD+ + KG+ F ++ ++
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQE 77
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 324
R +FVG + +E ++++L++ F G + S + D TG+ +G+ F +K E+
Sbjct: 25 RSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQET 78
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +1
Query: 97 AENGGGDSQDHNSAEAPGRD---DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTD 267
A + G +D + P D D LFV L+ TTD++L F +G I S V D
Sbjct: 95 ARSPNGLIRDDRIGDIPDADIKPPDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRD 154
Query: 268 PNTGRSRGFAFIVFKAPESIDK 333
TG S +AFI F+ E ++
Sbjct: 155 QKTGESLQYAFIEFEKDEDCER 176
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 561
+FV L+ +D+++ FS FGTIL E+ D+ + + FI FE ++
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDE 172
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +1
Query: 154 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAF 300
D K+F+GGL + ++++ ++GE+ + N+ D TG S+G+AF
Sbjct: 670 DSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAF 718
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 549
KIF+GGL + +++D+++ S FG + + D KG+ F +
Sbjct: 674 KIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEY 721
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 445 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 561
D ++ FSEFG +L V +P K + KGF FI FES+Q
Sbjct: 102 DWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQ 140
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +1
Query: 211 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK 387
L+ F +G++ +++ + G +GFAFI F++ + + V+ KK + ++
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFNRESKTKKEEKRE 162
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +1
Query: 169 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 348
L+VGGL + T+++LRDHF +GE+ SI++ N AF+ F + + + AA
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNC------AFVCFTSRAAAE---AAA 356
Query: 349 EHTINNKKVDPKKAKARHGK 408
+ + N + ++ K GK
Sbjct: 357 DRSFNKLILKGRRLKIMWGK 376
Score = 30.7 bits (66), Expect = 0.97
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIRNFFSEFGTILEVEM 498
++VGGL ++++ ++R+ F +FG + + M
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISM 335
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Frame = +1
Query: 169 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF----KAPESIDKV 336
LFVG L +E T+ + D YG IE + + TG S+G+ F+ + A ++ ++
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 337 MAAGEHTINNKKVDPKKAKAR-------HGK-IFVGGLSSEISDDE-IRNFFSEFGTILE 489
+ I + + A++ H + +FV L + + I+ FS+ G +
Sbjct: 175 LNTASKYIGGRILRVAFAESNLLTYADVHSRTLFVDRLPRDFKNGGLIKELFSQTGNVTF 234
Query: 490 VEMPFDKTKNQRKGFCFITFESEQ 561
++ + +GF F+ + + +
Sbjct: 235 AQVAINPANGGSRGFAFVDYATAE 258
Score = 35.5 bits (78), Expect = 0.034
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 339
R LFV L + + L ++ F G + V +P G SRGFAF+ + E +K
Sbjct: 205 RTLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEK-- 262
Query: 340 AAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 483
G+ N ++V+ + +G G + I ++ N + + T+
Sbjct: 263 --GQRAHNGRQVEGSNIRVAYGS--PGRTGASILGSQLDNTQAGYTTV 306
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE----QVVNDL 576
+FVG L E ++ + + S +G I + + + KG+ F+ + + Q L
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 577 LKTPKRTIGGK 609
L T + IGG+
Sbjct: 175 LNTASKYIGGR 185
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 40.7 bits (91), Expect = 0.001
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 22/137 (16%)
Frame = +1
Query: 250 INVKTDPNTGRSRGFAFIVF-------KAPESIDKVMAAGEHTINN---KKVDPKKAKAR 399
+ V DP +S+GF F+ F KA +D V G+ N +K +P + K
Sbjct: 542 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQTKPL 601
Query: 400 ------------HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 543
+ ++VG L ++ D E++ FS++G+ILE ++ D KG+ FI
Sbjct: 602 VWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFI 655
Query: 544 TFESEQVVNDLLKTPKR 594
E+ L + +R
Sbjct: 656 NARGEKRRQRCLTSSRR 672
Score = 31.1 bits (67), Expect = 0.74
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 487 EVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKE 612
EV + D KN+ KGF F++F E + + TIGGK+
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQ 583
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 169 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 348
++VG L + D EL+ F YG I V D +G+AFI + + + + +
Sbjct: 617 VYVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFINARGEKRRQRCLTSS 670
Query: 349 EHTINN 366
NN
Sbjct: 671 RRHGNN 676
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +1
Query: 91 GNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVK 261
GN GGG + + GRD + L V LS++TT L A+ + V
Sbjct: 262 GNTPRGGGRGRGGRGGFSGGRDQNPPNSSLIVRNLSYDTTTDSLG---AAFEGCSNAKVI 318
Query: 262 TDPNTGRSRGFAFIVFKAPESIDKVMA 342
D +G SRGF F+ + E+ KV++
Sbjct: 319 FDRESGESRGFGFVDYDDVETAKKVLS 345
Score = 35.1 bits (77), Expect = 0.045
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 157 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 336
++ +F+G LS++ ++ L F G + V T GRSRGF + F + E +K
Sbjct: 178 EEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVIT--QEGRSRGFGYADFTSKEDYNKA 235
Query: 337 MAA-GEHTINNK-KVDPKKAKARHG 405
+ GE + +++P +K G
Sbjct: 236 LELNGEDCCGREIRINPANSKPSRG 260
Score = 31.1 bits (67), Expect = 0.74
Identities = 25/101 (24%), Positives = 42/101 (41%)
Frame = +1
Query: 310 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 489
K S + + E T KK P K + +F+G LS + ++ + FF E G L
Sbjct: 152 KEESSSESDSDSDEETPTPKKTVPAKEEM---SVFLGNLSFDADEETLAAFFEEKG--LS 206
Query: 490 VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 612
+ + +GF + F S++ N L+ G+E
Sbjct: 207 ATCRVITQEGRSRGFGYADFTSKEDYNKALELNGEDCCGRE 247
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +1
Query: 157 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-ESIDK 333
+D +++VG L + +K+L D F YG I +++K G FAF+ F+ P ++ D
Sbjct: 259 NDCRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKN--RRGAGPPFAFVEFEDPRDAEDA 316
Query: 334 VMAAGEHTINNKKVDPKKAKARHGKIFVGG 423
V H + ++ + + G+ GG
Sbjct: 317 VKGRDGHEFDGYRIRVEFPRGGSGRGGGGG 346
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 169 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI---VFKAPESIDKVM 339
LFV + E + ++ + F YGEI++++V D TG +G+A + FK +S + +
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 340 AAGEHTINNKKVD 378
E N VD
Sbjct: 355 NGAEMLGQNISVD 367
Score = 34.7 bits (76), Expect = 0.060
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 555
+FV + E +D+I FS++G I + + D+ KG+ + +E+
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYET 343
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 226 GAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTIN--NKKVDPKKAKAR 399
GA+G + ++ + N ++ + KA E + V A + +K + K +
Sbjct: 20 GAHGLLGALEISPHENYQQNGNSS--TNKAREISNNVAALPIDLVGEVSKDISKYKVVSN 77
Query: 400 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 531
K+FVG + ++ E+++FF FG ++ ++ D+ K + KG
Sbjct: 78 KCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 166 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 291
K+FVG + ++ +EL+D FG +G++ + D RS+G
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Frame = +1
Query: 316 PESI-DKVMAAGEHTIN-NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 489
PE++ D+++ + ++N + D + K+FVGGL +I +DEI F FG+ L
Sbjct: 313 PENLADQIVPSLASSLNCSPNSDSEHIPRFSRKVFVGGLPPDIDEDEIHASFCRFGS-LT 371
Query: 490 VEMPF---DKTKNQRKGFCFITFESEQVVNDLL 579
V+ P K+ KG+ F+ + E V L+
Sbjct: 372 VDWPHKAESKSYFPPKGYAFLLYLEEISVQKLI 404
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFGAYGE--IESINVKTDPNTGRSRGFAFIVFKAPESIDKV 336
RK+FVGGL + + E+ F +G ++ + + +G+AF+++ S+ K+
Sbjct: 344 RKVFVGGLPPDIDEDEIHASFCRFGSLTVDWPHKAESKSYFPPKGYAFLLYLEEISVQKL 403
Query: 337 MAA 345
++A
Sbjct: 404 ISA 406
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = +1
Query: 373 VDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 552
VD K + +FV L EI+ + + +FFS G I + M D K R + +I F
Sbjct: 62 VDANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTR--YAYIEFA 119
Query: 553 SEQVVNDLLKTPKRTIGGK 609
Q + L+ GGK
Sbjct: 120 ETQAIVSALQYSGAIFGGK 138
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 244 ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 339
E++N+ TD TGR RGF F+ F + E ++K +
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAI 154
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +1
Query: 160 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 324
+ + ++G LS+ ++ L + F ++ + V TD TGR RGF F+ +A ++
Sbjct: 81 EHRCYIGNLSYSVDEQALEEKFHDCNVVD-VRVITDRETGRPRGFGFVTLEAKKT 134
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +1
Query: 394 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 561
A H + ++G LS + + + F + +++V + D+ + +GF F+T E+++
Sbjct: 80 AEH-RCYIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFVTLEAKK 133
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 139 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 309
+ G+ + + V LS ET + +L++ F G I I + D T +S+GFAFI F
Sbjct: 173 DGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF 229
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +1
Query: 142 APGRDD---DRKLFVGGLSWETTDKELRDHFGAYGEIESINVK---TDPNTGRSRGFAFI 303
AP DD +RKL++G L ++ + +GEIE PN G RG+ F+
Sbjct: 377 APEIDDAVSERKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFV 436
Query: 304 VFKAPESIDKVM 339
FK E K +
Sbjct: 437 EFKKKEDARKAL 448
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 35.9 bits (79), Expect = 0.026
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 585
++FVG + ++ +DE+ F G I EV + D Q +G+ F+ + S+ +KT
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMD-FNGQNRGYAFVVYTSKDDAKRCVKT 133
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +1
Query: 166 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 345
++FVG + + + EL F G I + + D N G++RG+AF+V+ + + + +
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFN-GQNRGYAFVVYTSKDDAKRCV-- 131
Query: 346 GEHTINNKKV 375
T+NN ++
Sbjct: 132 --KTLNNYEI 139
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 35.5 bits (78), Expect = 0.034
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +1
Query: 124 DHNSAEAPGRDDDRK----LFVGGLSWETTDKELRDHFGAY--GEIESINVKTDPNTGRS 285
DHNS D + + GL +E++ ++L F I+ + K+ N G++
Sbjct: 316 DHNSDNGSNSQDQEATSTIVRMFGLPFESSKRDLYKFFNGLKIASIDLLKHKSGKNQGKN 375
Query: 286 RGFAFIVFKAPESIDKVMAAGEHTINNKKVD 378
G AF+VFK+ K + I ++ ++
Sbjct: 376 TGVAFVVFKSNNDASKALKMDRSYIGHRYIE 406
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 34.7 bits (76), Expect = 0.060
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 406 KIFVGGLSSEISDDEIRNFFSEFGTILEV 492
++F+G L S + D ++ FS++GTILE+
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILEI 386
Score = 23.8 bits (49), Expect(2) = 2.7
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 157 DDRKLFVGGLSWETTDKELRDHFGAYGEIESI 252
D ++F+G L D ++ + F YG I I
Sbjct: 355 DSHQVFIGNLPSGVKDADVNEVFSKYGTILEI 386
Score = 23.8 bits (49), Expect(2) = 2.7
Identities = 6/26 (23%), Positives = 17/26 (65%)
Frame = +1
Query: 286 RGFAFIVFKAPESIDKVMAAGEHTIN 363
+ F F++F + E + +++A +H ++
Sbjct: 425 KNFGFVIFSSAEPVQQILANKKHFLS 450
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 34.3 bits (75), Expect = 0.079
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 160 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 264
DR +FVG L K L+ +F YGE+ES+ ++
Sbjct: 20 DRTVFVGNLPLTLKKKALKKYFSKYGEVESVRFRS 54
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 34.3 bits (75), Expect = 0.079
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 570
+F+GGL I++ I F G I + + K +N RK FC + F +++ V+
Sbjct: 353 VFIGGLPESINEHIINEIFYVCGEITSIRISKGKGENARK-FCHLRFGAKESVD 405
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 330
R +F+GGL + + + F GEI SI + +R F + F A ES+D
Sbjct: 351 RTVFIGGLPESINEHIINEIFYVCGEITSIRISKGKGE-NARKFCHLRFGAKESVD 405
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +1
Query: 166 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 345
K++ G L T+K+L + +G++ ++ K G+A++VFK + D+ +AA
Sbjct: 4 KVYCGRLPATATEKDLENLVKVFGKVREVDFK--------EGYAYVVFKENKDADRAVAA 55
Query: 346 -GEHTINNKKVDPKKAK-ARHGKIFVGGLSS 432
+ K+ +KAK R+G VGG ++
Sbjct: 56 LNNSEFHGAKILMEKAKEMRNG---VGGYTA 83
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 445 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 549
++IR+ F ++GTI +V + DK + +G C++ F
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKF 71
Score = 30.7 bits (66), Expect = 0.97
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 205 KELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 384
+++R F YG IE + V D T +RG ++ F S +A E N DPK
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASS--AALACEEMDGRNIGDDPK 94
Query: 385 KAK 393
K
Sbjct: 95 PIK 97
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = +1
Query: 115 DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 294
+++D + E G+ LFVG L ++ T +++ DHF G S + T S+G
Sbjct: 58 ETEDVITKEQDGKKQRYILFVGNLPFDLTTEKVLDHFRCAGS-SSFRLLTKKTDNSSKGC 116
Query: 295 AFIVFKAPESIDKVMAAGEHTINNKKVD 378
F+ K + + +K++
Sbjct: 117 GFLEIDDSIGYTKALNLHHSYLGGRKIN 144
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 151 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 309
R + K+++G L + +E+ + FG YG ++ + V +P GFAF +F
Sbjct: 28 RAEMTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARNP-----PGFAFCIF 75
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 232 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 324
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.42
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 472 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 561
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 232 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 324
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.42
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 472 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 561
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/43 (27%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +1
Query: 409 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT-KNQRKGF 534
+++GGLS +++++ + F++FG + +V + D++ K+++ GF
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQSGF 568
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 31.1 bits (67), Expect = 0.74
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 166 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTD 267
++++G L + TT+ ++R F +YG + IN+K +
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNN 37
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 31.1 bits (67), Expect = 0.74
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Frame = +1
Query: 157 DDRKLFVGGLSWETTDKELRDHFGAYG-EIESINVKTDPNTG-------RSRGFAFIVFK 312
D K++ G L ++ T EL+ F A + + + +P RSRGF F+ F
Sbjct: 48 DPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFA 107
Query: 313 APESIDKVMAAGEHTINNKKVDPKKAK 393
PE + ++N K+V + K
Sbjct: 108 NPEDAQTAV----KSLNGKEVQGRTLK 130
>SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 30.7 bits (66), Expect = 0.97
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 46 NDNFAQDITTDNQLNGNAENGGGDSQDH-NSAEAPGRDDD 162
ND+ DI D+ NGN + G D+ D N E G DDD
Sbjct: 20 NDDDGDDIDDDDG-NGNGNDNGDDNDDDDNDDEGNGDDDD 58
>SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 30.7 bits (66), Expect = 0.97
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 169 LFVGGLSWETTDKE-LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 345
L+VGGL+ T +E L + FG +GEIE I + N AF+ +K+ ++ A
Sbjct: 249 LYVGGLTLHTKLEEWLWEEFGEWGEIEDIRIIPKKN------IAFVRYKS--RLNAEFAK 300
Query: 346 GEHTINNKKVD 378
G+ +++ VD
Sbjct: 301 GDCSLSGAIVD 311
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 169 LFVGGLSWETTDKELRDHFGAYGEIESINVKTD 267
L V GLS TT+++LR F YG +E+I + D
Sbjct: 183 LGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYD 215
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 30.7 bits (66), Expect = 0.97
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 106 GGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS 285
GGG N + G+D L + L +K+L++ YG + N++ D N G S
Sbjct: 104 GGGGGGMENDVASDGKD----LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERDSN-GDS 158
Query: 286 RGFAFIVF 309
G A + F
Sbjct: 159 SGSALVRF 166
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 148 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 291
G R++ GL+ K L++ YG I++I V DP T +RG
Sbjct: 135 GTPPQREVLFSGLNDNVDKKFLQEICQKYGTIQTIKVYYDPQTKNTRG 182
>SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAE----NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKE 210
+ND D D+++NG + N GGD D + + DDD + G S++ D +
Sbjct: 58 DNDGGDDDDDDDDEVNGGNDDDDFNNGGDCDDDDDDDDDDDDDDDDINKKGASYDDDDDD 117
Query: 211 LRDHF 225
D +
Sbjct: 118 DDDGY 122
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKL--------FVGGLSWE 195
NN+N D +DN + N++N ++ D+N+ R D ++ ++ GL+WE
Sbjct: 613 NNNNNNNDNNSDNNSDNNSDNNSDNNSDNNNDNNSERGADPEIKRGKNPEGWIRGLNWE 671
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 162
NNDN + + +N N N N ++ D+NS + D
Sbjct: 597 NNDNNSDNNNNNNNNNNNNNNNNDNNSDNNSDNNSDNNSD 636
>SB_38604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +1
Query: 46 NDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHF 225
+DN D + N + +GG D D++S E DRK W + +
Sbjct: 117 DDNGEDDYDGNGDNNNDDNDGGDDDNDYDSNETMAFKKDRK------GWNNNGDDNENDT 170
Query: 226 GAYGEIESINVK 261
GE + +++K
Sbjct: 171 NTTGECDDVHIK 182
>SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 162
NN+N + +N N N N ++ D NS E DDD
Sbjct: 18 NNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDD 57
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 433 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 549
+ +D+++R+ F FG I V++ D + KG+ ++ F
Sbjct: 63 DFNDEDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKF 101
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/113 (22%), Positives = 47/113 (41%)
Frame = +1
Query: 103 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR 282
+GG S ++ + P ++L V + + D +LR FG++G I + + + G
Sbjct: 53 DGGSPSAENGDSSGP-----KRLHVTNIPFRFRDNDLRQMFGSFGVIADVEIIYN-ERGS 106
Query: 283 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEIS 441
F P ++ ++ G T N + KA+ + V G E+S
Sbjct: 107 KHAVRFPTRPNPLNL-RIEGFGFVTFNT-AAEANKAREKLNGTIVDGRKVEVS 157
>SB_8368| Best HMM Match : VWA (HMM E-Value=0)
Length = 771
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 169 LFVGGLSWETTDKELRDHFGAY--GEIESINVKTDPNTGR-SRGFAFIVFKAPESIDKVM 339
LF + +TD ++ HF Y E+ ++N+K D + R RG FI S +K+
Sbjct: 167 LFYARIVMYSTDASVKMHFNKYSGAEMNNVNIKRDIDELRLERGLTFIDKALKISAEKLF 226
Query: 340 A-AGEHTINNKKV 375
+N KKV
Sbjct: 227 TEKNGMRLNRKKV 239
>SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAE-NGGGDSQDHNS 135
NND+ D T D+ N N + NGGG D+N+
Sbjct: 193 NNDDDDDDDTDDDDHNNNDDDNGGGGDDDNNN 224
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 162
NN N TT+N N N N D D + +DD
Sbjct: 173 NNINTTTTTTTNNNNNNNNNNNDDDDDDDTDDDDHNNNDD 212
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 46 NDNFAQDITTDNQLN-GNAENGGGDSQDHNS 135
+DNF DI+ D LN G A N + ++NS
Sbjct: 335 HDNFNDDISNDGNLNGGGANNNNNKNNNYNS 365
>SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05)
Length = 410
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 124 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGE 240
DH AP +L V GL WE D++L YGE
Sbjct: 69 DHLLQVAPAEVSRARLQVHGLPWEVPDEDLVALLSPYGE 107
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 166 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 339
+LFVG LS ET ++L + F YG++ ++KT + FI ++ P ++ M
Sbjct: 7 QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKT--------AYGFIEYEDPRDAEEAM 56
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 162
NN+N +I +N N N N ++ ++N+ + DDD
Sbjct: 112 NNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDD 151
>SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2)
Length = 244
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 40 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 162
A N+ +A+ +T +N N N N ++ ++N+ DDD
Sbjct: 160 AINEKYAKIMTDNNNNNNNNNNNNNNNNNNNNNNNNNNDDD 200
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 28.7 bits (61), Expect = 3.9
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Frame = +1
Query: 124 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFG------AYGEI---ESINVKTDP-N 273
D N ++K+FV + +E+ + L+DH A+ EI E KT P +
Sbjct: 80 DTNRRSRSSGAPEKKVFVSNIPFESRWQNLKDHMNKVVGDVAFAEIFEDEKGRSKTRPED 139
Query: 274 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH---GKIFVGGLSSEISD 444
R A +S+ G ++ N +P K+ +FV L +++
Sbjct: 140 ENRMHRSRLRGNSASQSVGGT-GGGLPSLLNLSTNPMMKKSNDPAASTVFVTNLDYKVNW 198
Query: 445 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 555
++++ F G ++ E+ D K + KG + FE+
Sbjct: 199 QKLKDTFKCAGHVIRAEIMEDDEK-KSKGMGTVQFET 234
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 103 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 264
NGG + D + A R++ +LFV GL E ++ +LR+ + I+ + +KT
Sbjct: 603 NGGKSTDDASDAAYELRNEGVELFVVGLGDENSEAQLRE-IASVPVIDHVFMKT 655
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +1
Query: 40 ANNDNFAQDITTDNQLNGNAENGGGD-SQDHNSAEAPGRDDDRKLFVGGLSWETTDKELR 216
+N+DN D +T N N N EN D S +NS + DD K + +D
Sbjct: 289 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNS 346
Query: 217 DHFGAYGEIESINVKTDPNTGRS 285
D+ + +PNT S
Sbjct: 347 DNSTSDNSNPDNLTSDNPNTDNS 369
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 40 ANNDNFAQDITTDNQLNGNAENGGGD-SQDHNSAEAPGRDDDRK 168
+N+DN D +T N N N EN D S +NS + DD K
Sbjct: 103 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSDDSK 144
>SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 162
++DN D DN NG+ ++ D D + +A DDD
Sbjct: 61 DSDNNYDDNDDDNDDNGDDDDNDDDDDDDDDDDADDDDDD 100
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 124 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 258
D + EA R++ R ++VG +S ET ++ F YG IE + V
Sbjct: 358 DRSFREA-SREERRIVYVGKISDETHKDDVWRRFRKYGPIEKVTV 401
>SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 49 DNFAQDITTDNQLNGNAENGG-GDSQDHNSAEAPGRDDD 162
D + D D+ + + +N G GD D+ AE G DDD
Sbjct: 821 DYYYDDDDDDDDDDDDGDNDGDGDGDDYGDAENYGEDDD 859
>SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37)
Length = 599
Score = 28.3 bits (60), Expect = 5.2
Identities = 9/30 (30%), Positives = 22/30 (73%)
Frame = +1
Query: 46 NDNFAQDITTDNQLNGNAENGGGDSQDHNS 135
ND+ A D++ ++ + G+ +NGG D+ ++++
Sbjct: 180 NDDSASDVSIEDIIYGDDDNGGDDNDNYDN 209
>SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 165 SVVIASWGLSTVMILRITATVLCISIKLV 79
++++ S G++ L ITAT+LC SI L+
Sbjct: 267 TILLESSGVTLPKALHITATILCYSISLL 295
>SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017)
Length = 691
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAENGGGDSQD 126
+++++A D DN +NG+ ++GGGD D
Sbjct: 585 DDEDYAGD--GDNDVNGDGDSGGGDDDD 610
>SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)
Length = 752
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 118 SQDHNSAEAPGRDD-DRKLFVGGLSWETTDKELRDHFGAYGEI 243
S DHN +PG DD +R++ L ++ + E+R Y EI
Sbjct: 113 SPDHNDLTSPGHDDNEREVIQDSLPIDSPENEVRLAAVLYTEI 155
>SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +1
Query: 163 RKLFVGGLSWETTDKELRDHFG--AYGEIES---INVKTDPNTGRSRGFAFIVFKAPESI 327
++ +VG LS + T ++L HFG A + S + + + +G+S GF F+ P+ +
Sbjct: 5 KRFYVGNLSVKATREDLSHHFGLDATPYLRSSCWVELAVE-KSGKSLGFGFV--NVPKHL 61
Query: 328 -DKVMAAGEHTINNKKVDPKKAKAR 399
D +M + + +K++ + A+ +
Sbjct: 62 ADHLMHLNQTKLFDKRITIEPARGK 86
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 162
+N+N +DI N EN GG+S + N + DD+
Sbjct: 147 SNNNEDEDIQEVEDDNEGKENDGGESDEENDDDDEDGDDE 186
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGN--AENGGGDSQDHN 132
NNDN+ + DN N N NG DS D+N
Sbjct: 90 NNDNYDNNGNNDNNDNYNNYDNNGNNDSNDNN 121
>SB_1065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +1
Query: 52 NFAQDITTDNQLNGNAENGGGDSQDHNSAE-APGRDDDRKLFVGGLSWETTDKELRDHFG 228
N+ DI D+ N N +N D DH E DDD + + + T ++ RD
Sbjct: 51 NYDDDIDDDDYDNDN-DNYDDDDDDHKYEEDDDDDDDDDDMMMVMMMIHTGHQQHRDRQE 109
Query: 229 AYGEIESINVKTDPNTGRS 285
+G E N D N +
Sbjct: 110 DHGVQEDPNNDNDNNNNNN 128
>SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 205 YLWSPSSAHQQKVFCRHRVLGPQH 134
YLW+PS Q +V R+R G H
Sbjct: 143 YLWTPSGLSQSQVRSRNRANGTTH 166
>SB_56231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGG 183
++D D D+ + G+ ++ GD D + + G DDD + GG
Sbjct: 248 DDDGEVDDAGGDDGVGGDNDDDRGDDGDDDEDDDRGNDDDEDDWGGG 294
>SB_43316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 277 LCLDLSLH*YSLFHRMLQNDHGAPYLWSPSSAHQQKV 167
L +D LH Y F+R L D+ A Y W S +++V
Sbjct: 153 LIVDTGLH-YQGFNRSLALDYFAKYAWDTSDGAEKEV 188
>SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 162
NN+N + +N N N N D D + + DDD
Sbjct: 87 NNNNNNNNNNNNNNNNNNNNNNNNDDDDDDDDDDDDNDDD 126
>SB_23339| Best HMM Match : I-set (HMM E-Value=1.3e-07)
Length = 423
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 162
NN N ++ DN + +A+N D D+N+ + G DD
Sbjct: 14 NNGNDDENNYNDNHNDKDADNKNNDDGDNNNNDKCGYKDD 53
>SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 43 NNDNFAQDITTDNQLNGN--AENGGGDSQDHN 132
NNDN+ + DN N + NG DS D+N
Sbjct: 192 NNDNYDNNDNNDNNDNNDNYDNNGNNDSNDNN 223
>SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 76 DNQLNGNAENGGGDSQDHNSAEAPGRDDD 162
DN + + ++GGGD D N + G DDD
Sbjct: 92 DNDDSNDVDDGGGDGDDDNDGD--GVDDD 118
>SB_15580| Best HMM Match : Pentapeptide (HMM E-Value=0.2)
Length = 610
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 40 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEA 144
ANN N A + N N NA N ++ + N+A A
Sbjct: 254 ANNANNANNANNANANNANANNANANNANANNANA 288
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.134 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,607,081
Number of Sequences: 59808
Number of extensions: 407581
Number of successful extensions: 2331
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2140
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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