Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0886
(710 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 342 4e-95
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 342 4e-95
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 204 1e-53
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 77 2e-15
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 42 7e-05
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 34 0.023
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 30 0.28
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 29 0.66
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 29 0.66
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 28 1.5
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 2.0
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 3.5
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 27 3.5
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 27 3.5
SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+, L-... 26 4.6
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 26 4.6
SPAC227.16c |||GINS complex subunit Psf3|Schizosaccharomyces pom... 26 4.6
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 26 6.1
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 25 8.1
SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 8.1
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 25 8.1
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 342 bits (840), Expect = 4e-95
Identities = 162/236 (68%), Positives = 185/236 (78%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSY 182
LVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVVSY
Sbjct: 504 LVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSY 563
Query: 183 RETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKY 362
RE+V+E S LSKSPNKHNR+FM A+PM + L I+ G VNPRDDFK RAR + +++
Sbjct: 564 RESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEF 623
Query: 363 EYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRG 542
+DVT+ARKIWCFGP+ TG N++VD +K V YLNEIKDSVVA F WA+KEG M EENLR
Sbjct: 624 GWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRS 683
Query: 543 VRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVA 710
RFNI DV LH DAIHRGGGQIIPT RR +YA L A P + EPV+L EIQ E A
Sbjct: 684 CRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENA 739
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 342 bits (840), Expect = 4e-95
Identities = 162/236 (68%), Positives = 185/236 (78%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSY 182
LVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVVSY
Sbjct: 504 LVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSY 563
Query: 183 RETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKY 362
RE+V+E S LSKSPNKHNR+FM A+PM + L I+ G VNPRDDFK RAR + +++
Sbjct: 564 RESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEF 623
Query: 363 EYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRG 542
+DVT+ARKIWCFGP+ TG N++VD +K V YLNEIKDSVVA F WA+KEG M EENLR
Sbjct: 624 GWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRS 683
Query: 543 VRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVA 710
RFNI DV LH DAIHRGGGQIIPT RR +YA L A P + EPV+L EIQ E A
Sbjct: 684 CRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENA 739
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 204 bits (498), Expect = 1e-53
Identities = 98/237 (41%), Positives = 142/237 (59%), Gaps = 4/237 (1%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSY 182
L++GL++ KS P+ EESGEH + G GE++++ L DL ++ I I+ SDPV +
Sbjct: 616 LLDGLRKTNKSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVARF 675
Query: 183 RETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKY 362
ET + S C S +PNK NR+ M +P+ G+ DI+ G+VN K + + + Y
Sbjct: 676 CETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNY 735
Query: 363 EYDVTEARKIWCFGPEGTGPNILVDCSKGV----QYLNEIKDSVVAGFQWAAKEGVMAEE 530
++D+ +R IW FGP+ G NIL D + LN +K+ + GFQW +EG + +E
Sbjct: 736 DWDLLASRSIWAFGPDDRGTNILRDDTLSTDVDKNVLNSVKEYIKQGFQWGTREGPLCDE 795
Query: 531 NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP 701
+R V F + DV L + I+RGGGQIIPT RR Y+ LTA PRLMEPVY+ E+ P
Sbjct: 796 TIRNVNFRLMDVVLAPEQIYRGGGQIIPTARRVCYSSFLTASPRLMEPVYMVEVHAP 852
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 77.0 bits (181), Expect = 2e-15
Identities = 39/75 (52%), Positives = 48/75 (64%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSY 182
LV GL L ++DP VQ EE+GEH++ AGE+HLE CLKDL E A I I+ S P+V Y
Sbjct: 579 LVTGLDMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVPY 638
Query: 183 RETVAEESDQLCLSK 227
RET D L +K
Sbjct: 639 RETTIATPDLLAKNK 653
Score = 39.9 bits (89), Expect = 4e-04
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 24/149 (16%)
Frame = +3
Query: 321 DDFKTRARYLTEKYEYDVTEARK----IWCFGPEGTGPNILVDCSKGVQYL--------- 461
+ F R L E+ D+ E + I FGP+ GPNIL D +K ++
Sbjct: 724 EKFYERLSKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKTKKMRDFRRQSDETKL 783
Query: 462 --NEIKDSVVAGFQWAAKEGVMAEENLRGV-----RFNIYDVTLHTDAIHRGG----GQI 608
+++ + VV FQ +G + E ++G+ +F+I D + + + GQ+
Sbjct: 784 IPSDLSEYVVTAFQLITHQGPLCAEPVQGICVSIDQFDISDDSEDSKLLTINNPQIPGQV 843
Query: 609 IPTTRRCLYACLLTAQPRLMEPVYLCEIQ 695
I + + L PRLM +Y C++Q
Sbjct: 844 ISVVKESIRHGFLGWSPRLMLAMYSCDVQ 872
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 42.3 bits (95), Expect = 7e-05
Identities = 20/66 (30%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +3
Query: 9 EGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 185
+ L R + DP + ++ ES E I++G GELHLE+ ++ + ++ + + P V++R
Sbjct: 492 KALNRFQREDPTFRVQLDNESKETIISGMGELHLEVYVERMRREYK-VDCETGKPRVAFR 550
Query: 186 ETVAEE 203
ET++++
Sbjct: 551 ETLSKK 556
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 33.9 bits (74), Expect = 0.023
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINE-ESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVS 179
L+E L + + DP + + E+G+ ++ G G +HL++ + L + V
Sbjct: 460 LLEALANMNREDPSFRYTQDLENGQLLIQGMGIMHLQVSYERLVSEFGA-RASLGKVQVG 518
Query: 180 YRETVAEESDQLCLSKSPNKHN 245
YRET+ + S + NK N
Sbjct: 519 YRETLIDVSFNSVTLSTENKEN 540
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 30.3 bits (65), Expect = 0.28
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 117 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 275
+K LEE+ + +K SD V + ++ + P +++FM PMP
Sbjct: 287 VKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKIFMDTPPMP 339
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 29.1 bits (62), Expect = 0.66
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 202 SSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGS 35
S T YDTTG+D ++ SS R WS+ P +P ++ I+ T GS
Sbjct: 117 SDYTSVYYDTTGTDDVVYEYHPSSERHKSTNDTWSTNLPT---NPTTTAIYSTSGS 169
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 29.1 bits (62), Expect = 0.66
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +3
Query: 57 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 236
+EE+ + A E C++DL++ + K+SD Y T+ ++KS
Sbjct: 198 DEETLHELFPNASEF---TCVRDLKKLEKKVK-KRSDLGNKYESTLNS-----LINKSVK 248
Query: 237 KHNRLFMKAQPMPDGL 284
KHN+L K +P+P L
Sbjct: 249 KHNKLVKKHKPLPSTL 264
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 27.9 bits (59), Expect = 1.5
Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 3/135 (2%)
Frame = +3
Query: 36 DPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQL 215
D ++ I E+ ++ + L E ++ + E I + + + +++ D
Sbjct: 413 DVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNF 472
Query: 216 CLSKSPNKHNRLFMKAQPMPDGLPEDI---DEGRVNPRDDFKTRARYLTEKYEYDVTEAR 386
+ + + L +P+ EDI +E + R+ + Y + + VT ++
Sbjct: 473 RFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSK 532
Query: 387 KIWCFGPEGTGPNIL 431
+ FGP GTG +L
Sbjct: 533 GVLFFGPPGTGKTLL 547
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 108 EICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNK 239
E+C +LE+D I +S +S + A++ DQL S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 3.5
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +3
Query: 102 HLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDG 281
HL++CL D +E+ + K + E S +L LSK + + + M
Sbjct: 475 HLKLCLSDSQEELLQLNAKLEKANIVIDEL---NSAKLKLSKQVEEESSMKDDLTEMNQR 531
Query: 282 LPEDID--EGRVNPRDDFKTRARYLTEKYEYD 371
L E I+ E VN +T + T K +Y+
Sbjct: 532 LKEQIESYENEVNSEITSRTLKEFETLKTQYE 563
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 674 RLHETGL-SS*QTCVQASSSCWNDLATTSMDGISMECYIIDVESNTTQI 531
++ ET L ++ Q + CW++L+TTS + + II + TT I
Sbjct: 191 QIQETSLGATTQEDESSDGICWDELSTTSPESSKVSEPIIQDNTQTTHI 239
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 410 LGAKAPNLTGFGNIVFVLFCKIPSAS 333
+G PNL GN +F L ++PS+S
Sbjct: 169 IGILPPNLNSIGNKMFSLKSRVPSSS 194
>SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+,
L-lysine forming] |Schizosaccharomyces pombe|chr
1|||Manual
Length = 368
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 619 VVGMIWPPPLWMASVWSVTS*MLNLTPRKFSSAITPSLAA 500
V G+ PPPL + S+ + + + + FS A+ PSL A
Sbjct: 305 VKGVTTPPPLEVISIDHLPTLLPRESSEAFSEALIPSLLA 344
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 282 LPEDIDEGRVNPRDDFKT 335
LPE IDEG+++ DD KT
Sbjct: 194 LPEKIDEGKLSDVDDGKT 211
>SPAC227.16c |||GINS complex subunit Psf3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 166
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 595 PLWMASVWSVTS*MLNLTPRKFSSAITPSLAAHWNPATTESLISLRY 455
P W+A V ++ S + P FSS + +L A+ N + + + Y
Sbjct: 43 PFWLAEVLAINSFVSIHMPAPFSSVVRNALKANPNSVSIRDITTHYY 89
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 378 EARKIWCFGPEGTGPNILVD--CSKGVQYLNE 467
E + GP G+G ++LVD S+ Q +NE
Sbjct: 574 EGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/33 (30%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -2
Query: 100 SSPAPATMCSPDSSL--IHCTMGSDLARRLRPS 8
S+ +P+T+CSPD+++ ++ G L ++ P+
Sbjct: 403 SNVSPSTICSPDNNVTFVNLAPGEKLTFKIEPN 435
>SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.4 bits (53), Expect = 8.1
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = -1
Query: 695 LNFTKIYRLHETGLSS*QTCVQASSSCWND-----LAT--TSMDGISMECYIIDVESNTT 537
L+++K++ LH +Q S S +ND LA ++ + + Y++ E +
Sbjct: 192 LSYSKVFFLH---------LLQHSDSSFNDKFLLLLANIPVTVSNVEVLLYLLQQEESLA 242
Query: 536 QILFSHNSFLSGPLESSHNRVLN 468
Q + SFL L S HN+V N
Sbjct: 243 QFDLNGKSFLYHMLVSLHNQVTN 265
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1317
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 456 YLNEIKDSVVAGFQWAAKEGVMAEENLRGVR 548
YL+ + +AGFQ G+ ++N +GVR
Sbjct: 248 YLSPVVRRYLAGFQSGFLHGLKTKDNSKGVR 278
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,140,448
Number of Sequences: 5004
Number of extensions: 69252
Number of successful extensions: 246
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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