Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0886
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 349 1e-96
04_01_0103 + 1082077-1082167,1083037-1085477 346 9e-96
02_04_0017 + 18937774-18937864,18938505-18940945 346 9e-96
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 310 1e-84
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 235 2e-62
03_05_0511 + 25056018-25059107 75 4e-14
02_04_0148 - 20198407-20201424 71 1e-12
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 49 4e-06
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 42 5e-04
04_01_0330 - 4369326-4370852 30 2.1
10_01_0323 + 3530246-3530446,3531091-3531726,3531860-3532018,353... 29 2.8
06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027 29 3.6
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 29 4.8
10_08_0621 + 19328357-19329545,19329967-19329986 28 6.4
10_08_0081 + 14710478-14710822 28 6.4
10_01_0230 - 2433082-2434674 28 6.4
07_03_0698 - 20765305-20768526 28 8.4
02_02_0340 + 9135846-9138377 28 8.4
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 28 8.4
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 349 bits (859), Expect = 1e-96
Identities = 168/239 (70%), Positives = 196/239 (82%), Gaps = 3/239 (1%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVS 179
LVEGLKRLAKSDPMV C EESGEHI+AGAGELHLEICLKDL+ED I S PVVS
Sbjct: 500 LVEGLKRLAKSDPMVLCTVEESGEHIIAGAGELHLEICLKDLQEDFMGGAEITVSPPVVS 559
Query: 180 YRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEK 359
+RETV E+S + +SKSPNKHNRL+M+A+PM +GLPE IDEGR+ PRDD K R++ L+E+
Sbjct: 560 FRETVLEKSCRTVMSKSPNKHNRLYMEARPMEEGLPEAIDEGRIGPRDDPKVRSKILSEE 619
Query: 360 YEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENL- 536
+ +D A+KIWCFGPE TGPNI+VD KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+
Sbjct: 620 FGWDKDLAKKIWCFGPETTGPNIVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMR 679
Query: 537 -RGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVA 710
RG+ F + DV LH+DAIHRGGGQIIPT RR +YA LTA+PRL+EPVYL EIQ PE A
Sbjct: 680 GRGICFEVCDVILHSDAIHRGGGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENA 738
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 346 bits (851), Expect = 9e-96
Identities = 163/237 (68%), Positives = 194/237 (81%), Gaps = 1/237 (0%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVS 179
LVEGLKRLAKSDPMV C EESGEHI+AGAGELHLEICLKDL+ED I S PVVS
Sbjct: 504 LVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVS 563
Query: 180 YRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEK 359
+RETV E+S + +SKSPNKHNRL+M+A+P+ +GL E ID+GR+ PRDD K R++ L+E+
Sbjct: 564 FRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEE 623
Query: 360 YEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLR 539
+ +D A+KIWCFGPE TGPN++VD KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+R
Sbjct: 624 FGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMR 683
Query: 540 GVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVA 710
G+ F + DV LH DAIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A
Sbjct: 684 GICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENA 740
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 346 bits (851), Expect = 9e-96
Identities = 163/237 (68%), Positives = 194/237 (81%), Gaps = 1/237 (0%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVS 179
LVEGLKRLAKSDPMV C EESGEHI+AGAGELHLEICLKDL+ED I S PVVS
Sbjct: 504 LVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVS 563
Query: 180 YRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEK 359
+RETV E+S + +SKSPNKHNRL+M+A+P+ +GL E ID+GR+ PRDD K R++ L+E+
Sbjct: 564 FRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEE 623
Query: 360 YEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLR 539
+ +D A+KIWCFGPE TGPN++VD KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+R
Sbjct: 624 FGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMR 683
Query: 540 GVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVA 710
G+ F + DV LH DAIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A
Sbjct: 684 GICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENA 740
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 310 bits (760), Expect = 1e-84
Identities = 147/245 (60%), Positives = 187/245 (76%), Gaps = 9/245 (3%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVS 179
LVEGLKRLAKSDP+V C EESGEH++AG G+LHLEIC+KDL+ED I P+++
Sbjct: 506 LVEGLKRLAKSDPLVVCTIEESGEHVIAGVGQLHLEICIKDLQEDFMGGAEIIVGPPIIT 565
Query: 180 YRETVAEESDQLCLSKSPNKHNRLFMKAQPMP-DGLPED-------IDEGRVNPRDDFKT 335
YRETV + S + +SKSPNKHNRL+M+A+P+ + L +D ID+ R+ P+DD K
Sbjct: 566 YRETVTKNSCRTVMSKSPNKHNRLYMEARPLDKEDLQQDEPSLCKAIDDERIGPKDDIKE 625
Query: 336 RARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEG 515
R + L+E++ +D A+KIW FGPE GPN+LVD KGVQYL+EIKDSVVAGFQWA+KEG
Sbjct: 626 RGKILSEEFGWDKDLAKKIWAFGPETKGPNLLVDMCKGVQYLSEIKDSVVAGFQWASKEG 685
Query: 516 VMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQ 695
+AEEN+RGV F + DVTLH+D+IHRGGGQ+IPT RR +YA LTA PRLMEP+Y +IQ
Sbjct: 686 ALAEENMRGVCFELCDVTLHSDSIHRGGGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQ 745
Query: 696 CPEVA 710
P+ A
Sbjct: 746 VPKTA 750
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 235 bits (576), Expect = 2e-62
Identities = 110/237 (46%), Positives = 158/237 (66%), Gaps = 4/237 (1%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSY 182
+VEGL++++KS P+ EESGEH + G GEL+L+ +KDL E ++ + +K +DPVV++
Sbjct: 627 MVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVTF 686
Query: 183 RETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKY 362
ETV + S C +++PNK N++ M A+P+ GL EDI+ G V+ K + ++Y
Sbjct: 687 CETVVDTSSMKCFAETPNKRNKITMVAEPLEKGLAEDIENGLVSLDSRQKEITDFFRQRY 746
Query: 363 EYDVTEARKIWCFGPEGTGPNILVDCSKGVQ----YLNEIKDSVVAGFQWAAKEGVMAEE 530
++DV AR IW FGPE GPNIL+D + V+ LN +KDS+V GFQW A+EG + +E
Sbjct: 747 QWDVLAARSIWAFGPEKQGPNILLDDTLSVEVDKNLLNAVKDSIVQGFQWGAREGPLCDE 806
Query: 531 NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP 701
+R V+F I + + + +HRGGGQIIPT RR +Y+ L A PRLMEPVY EIQ P
Sbjct: 807 PIRNVKFKILNANIAPEPLHRGGGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQTP 863
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSY 182
LV+GLK L ++DP V+ + GEH++A AGE+HLE C KDLEE A + + SDP+VS+
Sbjct: 553 LVKGLKLLNRADPFVEYTVSQRGEHVLAAAGEIHLERCKKDLEERFAKVKLVVSDPLVSF 612
Query: 183 RETVAEESDQLCLS-KSPNK 239
+ET+ E L S K+P +
Sbjct: 613 KETIEGEGLALIESLKAPRE 632
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Frame = +3
Query: 468 IKDSVVAGFQWAAKEGVMAEENLRGVRFNI--YDVTLHTDAIHRG------GGQIIPTTR 623
+++ +V+GFQ A G + +E + G+ F + Y H+DA + GQ+I +
Sbjct: 815 LRNCIVSGFQLATNAGPLCDEPMWGLVFVVEPYIFCDHSDAANHSEQYNIFSGQVITAVK 874
Query: 624 RCLYACLLTAQPRLMEPVYLCEIQCP 701
++ +PRL+E +Y CE+ P
Sbjct: 875 EACREAVVQNKPRLVEAMYFCELTTP 900
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/67 (44%), Positives = 49/67 (73%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSY 182
LV+GLK L ++DP ++ E GEH++A AGE+HLE C+K+L+E A + ++ S P+VS+
Sbjct: 533 LVKGLKLLNQADPFIEYTVSERGEHVLAAAGEIHLEHCIKNLQERFARVQLEVSKPLVSF 592
Query: 183 RETVAEE 203
++T+ E
Sbjct: 593 KDTIQGE 599
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +3
Query: 468 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTL---------HTDAIHRGGGQIIPTT 620
+K+S+ GFQ A G + E G+ F + L +D GQII
Sbjct: 790 VKNSIATGFQLATNAGPLCGEPTWGLIFLVKPYILPDSADASNNQSDHYSTFSGQIITAV 849
Query: 621 RRCLYACLLTAQPRLMEPVYLCEIQCP 701
R A +L ++PRL+EP+Y CE+ P
Sbjct: 850 REACQAAILESKPRLVEPMYFCELTTP 876
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Frame = +3
Query: 9 EGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 185
+ L R K DP + ++ ESGE I++G GELHL+I ++ + ++ + K P V++R
Sbjct: 496 KALNRFQKEDPTFRVGLDPESGETIISGMGELHLDIYVERIRREYK-VDAKVGKPRVNFR 554
Query: 186 ETVAE--ESDQLCLSKS--PNKHNRLFMKAQPMP 275
ET+ + E D L +S ++ R+ +P+P
Sbjct: 555 ETITQRAEFDYLHKKQSGGQGQYGRVCGYIEPLP 588
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCI-NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVS 179
+ GL +LA+ DP +EE+ + ++ G GELHL+I + L+ + + P V+
Sbjct: 474 MATGLIKLAQEDPSFHFSRDEETNQTVIEGMGELHLDIIVDRLKREFR-VEANVGAPQVN 532
Query: 180 YRETVAEESD 209
YRE++++ S+
Sbjct: 533 YRESISKISE 542
>04_01_0330 - 4369326-4370852
Length = 508
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 616 VGMIWPPPLWMASVWSVTS 560
+G IWPPP+W S TS
Sbjct: 487 IGKIWPPPVWFKRCTSATS 505
>10_01_0323 +
3530246-3530446,3531091-3531726,3531860-3532018,
3532276-3532569,3557747-3557941,3558875-3559095,
3559190-3559373,3559797-3559973,3561319-3561824,
3561880-3562060
Length = 917
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 566 YIIDVESNTTQILFSHNSFLSGPLESSHNRVLNFIEVLNSFGAIHQ 429
Y I++ I+ S+N L G LES H+R L+ V A+H+
Sbjct: 644 YAINIAHRRVDIMDSNNYNLIGTLESDHHRALSKRIVKRLSDALHE 689
>06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027
Length = 178
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 382 PVRFGALAPRVPAPTSWWIAPKEFSTSMKLRTLLWLDSSGPLRK 513
P R PR+ PTS + P+E +T+ + W D G +R+
Sbjct: 58 PARLRVARPRIQRPTSSHVEPEEVTTASR-----WRDGRGSVRR 96
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 201 ESDQLCLSKSPNKHNRLFMKAQPMPDGLPE 290
E + LCL PN+H + + A+ +P LPE
Sbjct: 42 EKENLCLYGFPNEHWEVNLPAEEVPPELPE 71
>10_08_0621 + 19328357-19329545,19329967-19329986
Length = 402
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 369 DVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEG 515
DVT +R+I P G G I + GV +L S+V F+W G
Sbjct: 322 DVTGSREIRMM-PFGAGRRICAGLNVGVMHLEYFVGSMVMEFEWKEVAG 369
>10_08_0081 + 14710478-14710822
Length = 114
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -2
Query: 235 LGDFERQSWSDSSATVSRYDTTGSDFLIGMQAWSS-SRSLRQISRWSSPAPAT 80
+ R SWSD V+R T+ + + W+ R +R S WSS AP T
Sbjct: 1 MSHLRRLSWSDQ--VVARQPTSEEEDVDAGGRWTEVRRKVRPHSWWSSNAPTT 51
>10_01_0230 - 2433082-2434674
Length = 530
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +3
Query: 369 DVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVR 548
D+T R+I P G G I +L ++VA F+W A EG + + +
Sbjct: 452 DITGTREIRMM-PFGAGRRICPGLGVATLHLEYFVANMVAAFEWRAAEGEAVDVDGEKLE 510
Query: 549 FNI 557
F +
Sbjct: 511 FTV 513
>07_03_0698 - 20765305-20768526
Length = 1073
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +3
Query: 534 LRGVRFNIYDVTLHTDAIHRG----GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQ 695
L G + ++ D+ L D +HRG ++ P +L P+L+E +++C I+
Sbjct: 870 LSGTKASLIDLFLQVDKLHRGLLSLSIRMDPPGNWDAIDAILLRPPKLLESLHICSIR 927
>02_02_0340 + 9135846-9138377
Length = 843
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 175 TTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCS 71
TTGSD L G+Q + R+L I+ P +CS
Sbjct: 801 TTGSDVLDGLQPHYNLRALGIINHGGPTGPGWLCS 835
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 521 HNSFLSGPLESSHNRVLNFIEVLNSF 444
HN L+ +E+SH VL FI +L SF
Sbjct: 183 HNGNLTNRMETSHEEVLPFIFLLLSF 208
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,739,585
Number of Sequences: 37544
Number of extensions: 515380
Number of successful extensions: 1640
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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