Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0886
(710 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 346 1e-95
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 224 4e-59
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 224 4e-59
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 219 2e-57
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 72 4e-13
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 49 4e-06
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 49 4e-06
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 41 7e-04
At5g26210.1 68418.m03119 PHD finger family protein contains Pfam... 30 1.7
At5g64220.1 68418.m08067 calmodulin-binding protein similar to a... 29 3.0
At1g67560.1 68414.m07697 lipoxygenase family protein similar to ... 29 3.0
At1g70160.1 68414.m08073 expressed protein similar to hypothetic... 29 4.0
At5g17300.1 68418.m02026 myb family transcription factor similar... 28 5.3
At5g15580.1 68418.m01824 expressed protein unknown protein F14P3... 28 5.3
At1g51930.1 68414.m05854 zinc finger (C3HC4-type RING finger) fa... 28 5.3
At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger) fa... 28 7.0
At3g59570.1 68416.m06647 RabGAP/TBC domain-containing protein si... 28 7.0
At1g70890.1 68414.m08179 major latex protein-related / MLP-relat... 28 7.0
At5g38500.1 68418.m04654 hypothetical protein contains Pfam prof... 27 9.3
At5g07990.1 68418.m00930 flavonoid 3'-monooxygenase / flavonoid ... 27 9.3
At3g42790.1 68416.m04474 PHD finger family protein contains PHD-... 27 9.3
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 346 bits (850), Expect = 1e-95
Identities = 162/237 (68%), Positives = 194/237 (81%), Gaps = 1/237 (0%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVS 179
LVEGLKRLAKSDPMV C EESGEHIVAGAGELHLEICLKDL++D I KSDPVVS
Sbjct: 504 LVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVS 563
Query: 180 YRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEK 359
+RETV + S + +SKSPNKHNRL+M+A+PM +GL E ID+GR+ PRDD K R++ L E+
Sbjct: 564 FRETVCDRSTRTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGRIGPRDDPKIRSKILAEE 623
Query: 360 YEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLR 539
+ +D A+KIW FGPE TGPN++VD KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+R
Sbjct: 624 FGWDKDLAKKIWAFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGPLAEENMR 683
Query: 540 GVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVA 710
G+ F + DV LH+DAIHRGGGQ+IPT RR +YA +TA+PRL+EPVY+ EIQ PE A
Sbjct: 684 GICFEVCDVVLHSDAIHRGGGQVIPTARRVIYASQITAKPRLLEPVYMVEIQAPEGA 740
>At1g06220.2 68414.m00656 elongation factor Tu family protein similar
to Cryptosporidium parvum elongation factor-2 GB:U21667
GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 224 bits (548), Expect = 4e-59
Identities = 107/237 (45%), Positives = 154/237 (64%), Gaps = 4/237 (1%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSY 182
+VEGL++++KS P+ EESGEH + G GEL+L+ +KDL E ++ + +K +DPVVS+
Sbjct: 617 MVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSF 676
Query: 183 RETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKY 362
ETV E S C +++PNK N++ M A+P+ GL EDI+ G V+ + K + KY
Sbjct: 677 CETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVVSIDWNRKQLGDFFRTKY 736
Query: 363 EYDVTEARKIWCFGPEGTGPNILVDCSKGVQ----YLNEIKDSVVAGFQWAAKEGVMAEE 530
++D+ AR IW FGP+ GPNIL+D + + + +KDS+V GFQW A+EG + +E
Sbjct: 737 DWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDSIVQGFQWGAREGPLCDE 796
Query: 531 NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP 701
+R V+F I D + + +HRG GQ+IPT RR Y+ L A PRLMEPVY EIQ P
Sbjct: 797 PIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMATPRLMEPVYYVEIQTP 853
>At1g06220.1 68414.m00655 elongation factor Tu family protein similar
to Cryptosporidium parvum elongation factor-2 GB:U21667
GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 224 bits (548), Expect = 4e-59
Identities = 107/237 (45%), Positives = 154/237 (64%), Gaps = 4/237 (1%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSY 182
+VEGL++++KS P+ EESGEH + G GEL+L+ +KDL E ++ + +K +DPVVS+
Sbjct: 617 MVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSF 676
Query: 183 RETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKY 362
ETV E S C +++PNK N++ M A+P+ GL EDI+ G V+ + K + KY
Sbjct: 677 CETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVVSIDWNRKQLGDFFRTKY 736
Query: 363 EYDVTEARKIWCFGPEGTGPNILVDCSKGVQ----YLNEIKDSVVAGFQWAAKEGVMAEE 530
++D+ AR IW FGP+ GPNIL+D + + + +KDS+V GFQW A+EG + +E
Sbjct: 737 DWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDSIVQGFQWGAREGPLCDE 796
Query: 531 NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP 701
+R V+F I D + + +HRG GQ+IPT RR Y+ L A PRLMEPVY EIQ P
Sbjct: 797 PIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMATPRLMEPVYYVEIQTP 853
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 219 bits (534), Expect = 2e-57
Identities = 106/237 (44%), Positives = 152/237 (64%), Gaps = 4/237 (1%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSY 182
+VEGL++++KS P+ EESGEH + G GEL+L+ +KDL E ++ + +K +DPVVS+
Sbjct: 603 MVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIIKDLRELYSEVQVKVADPVVSF 662
Query: 183 RETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKY 362
ETV E S C +++PNK N+L M A+P+ GL EDI+ G V+ + + KY
Sbjct: 663 CETVVESSSMKCFAETPNKKNKLTMIAEPLDRGLAEDIENGVVSIDWNRVQLGDFFRTKY 722
Query: 363 EYDVTEARKIWCFGPEGTGPNILVDCSKGVQ----YLNEIKDSVVAGFQWAAKEGVMAEE 530
++D+ AR IW FGP+ G NIL+D + + + +KDS+V GFQW A+EG + +E
Sbjct: 723 DWDLLAARSIWAFGPDKQGTNILLDDTLPTEVDRNLMMGVKDSIVQGFQWGAREGPLCDE 782
Query: 531 NLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCP 701
+R V+F I D + + +HRG GQ+IPT RR Y+ L A PRLMEPVY EIQ P
Sbjct: 783 PIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMATPRLMEPVYYVEIQTP 839
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 71.7 bits (168), Expect = 4e-13
Identities = 32/71 (45%), Positives = 49/71 (69%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSY 182
L++GL+ L ++DP V+ GEH++A AGE+HLE C+KDL+E A + ++ S P+VSY
Sbjct: 554 LMKGLRLLNRADPFVEITVSARGEHVLAAAGEVHLERCVKDLKERFAKVNLEVSPPLVSY 613
Query: 183 RETVAEESDQL 215
RET+ + L
Sbjct: 614 RETIEGDGSNL 624
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Frame = +3
Query: 468 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYD-----VTLHTDAIHRGG---GQIIPTTR 623
++ S+V+GFQ A G + +E + G+ F I + TD G GQ++ +
Sbjct: 801 LESSIVSGFQLATASGPLCDEPMWGLAFTIESHLAPAEDVETDKPENFGIFTGQVMTAVK 860
Query: 624 RCLYACLLTAQPRLMEPVYLCEIQ-CPE 704
A +L PR++E +Y CE+ PE
Sbjct: 861 DACRAAVLQTNPRIVEAMYFCELNTAPE 888
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Frame = +3
Query: 9 EGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 185
+ L R K DP + ++ ESG+ I++G GELHL+I ++ + ++ + P V++R
Sbjct: 480 KALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERMRREYK-VDATVGKPRVNFR 538
Query: 186 ETVAE--ESDQLCLSKS--PNKHNRLFMKAQPMPDGLPEDID 299
ET+ + E D L +S ++ R+ +P+P G E +
Sbjct: 539 ETITQRAEFDYLHKKQSGGAGQYGRVTGYVEPLPPGSKEKFE 580
Score = 30.7 bits (66), Expect = 1.00
Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 9/191 (4%)
Frame = +3
Query: 156 KKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKT 335
+K DP ++R + ES Q +S H ++++ + + + RVN R+
Sbjct: 486 QKEDP--TFRVGLDPESGQTIISGMGELHLDIYVERMRREYKVDATVGKPRVNFRETITQ 543
Query: 336 RAR--YLTEKYEYDVTEARKIWCFG---PEGTGPNI-LVDCSKGVQYLNEIKDSVVAGFQ 497
RA YL +K + ++ + P G+ + G + ++ GF+
Sbjct: 544 RAEFDYLHKKQSGGAGQYGRVTGYVEPLPPGSKEKFEFENMIVGQAIPSGFIPAIEKGFK 603
Query: 498 WAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYA---CLLTAQPRLM 668
AA G + + +R + L A H + +YA C A+P ++
Sbjct: 604 EAANSGSLIGHPVENLR-----IVLTDGASHAVDSSELAFKMAAIYAFRLCYTAARPVIL 658
Query: 669 EPVYLCEIQCP 701
EPV L E++ P
Sbjct: 659 EPVMLVELKVP 669
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Frame = +3
Query: 9 EGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 185
+ L R K DP + ++ ESG+ I++G GELHL+I ++ + ++ + P V++R
Sbjct: 480 KALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERMRREYK-VDATVGKPRVNFR 538
Query: 186 ETVAE--ESDQLCLSKS--PNKHNRLFMKAQPMPDGLPEDID 299
ET+ + E D L +S ++ R+ +P+P G E +
Sbjct: 539 ETITQRAEFDYLHKKQSGGAGQYGRVTGYVEPLPPGSKEKFE 580
Score = 30.7 bits (66), Expect = 1.00
Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 9/191 (4%)
Frame = +3
Query: 156 KKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKT 335
+K DP ++R + ES Q +S H ++++ + + + RVN R+
Sbjct: 486 QKEDP--TFRVGLDPESGQTIISGMGELHLDIYVERMRREYKVDATVGKPRVNFRETITQ 543
Query: 336 RAR--YLTEKYEYDVTEARKIWCFG---PEGTGPNI-LVDCSKGVQYLNEIKDSVVAGFQ 497
RA YL +K + ++ + P G+ + G + ++ GF+
Sbjct: 544 RAEFDYLHKKQSGGAGQYGRVTGYVEPLPPGSKEKFEFENMIVGQAIPSGFIPAIEKGFK 603
Query: 498 WAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYA---CLLTAQPRLM 668
AA G + + +R + L A H + +YA C A+P ++
Sbjct: 604 EAANSGSLIGHPVENLR-----IVLTDGASHAVDSSELAFKMAAIYAFRLCYTAARPVIL 658
Query: 669 EPVYLCEIQCP 701
EPV L E++ P
Sbjct: 659 EPVMLVELKVP 669
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 LVEGLKRLAKSDPMVQCI-NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVS 179
+ GL +LA+ DP +EE + ++ G GELHLEI + L+ + + P V+
Sbjct: 510 MATGLIKLAQEDPSFHFSRDEEMNQTVIEGMGELHLEIIVDRLKREFK-VEANVGAPQVN 568
Query: 180 YRETVAE 200
YRE++++
Sbjct: 569 YRESISK 575
>At5g26210.1 68418.m03119 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 255
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 201 ESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDI 296
E + LCL PN+H + + A+ +P LPE +
Sbjct: 44 EKENLCLYGHPNEHWEVNLPAEEVPPELPEPV 75
>At5g64220.1 68418.m08067 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from[Nicotiana tabacum]
Length = 1050
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = +3
Query: 258 KAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVD 437
K P+P + +D+ E + + R + E++E D I EG GPNIL +
Sbjct: 610 KEPPLPGTIEKDLTE--------LEAKERLIREEFE-DKLYLWLIHKVTEEGKGPNILDE 660
Query: 438 CSKGVQYLNEIKDSVVAGFQWAAK 509
+GV +L + G+ WA K
Sbjct: 661 DGQGVLHL-----AAALGYDWAIK 679
>At1g67560.1 68414.m07697 lipoxygenase family protein similar to
13-lipoxygenase GB:CAA65269 [Solanum tuberosum],
gi:1654140 [Lycopersicon esculentum]
Length = 917
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +3
Query: 222 SKSPNKHNRLFMKAQPM-----PDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDV 374
SK+ N R+ ++QP PDG+ E ++ V+ R D K + Y+YDV
Sbjct: 204 SKNDNPQARIIFRSQPCLPSETPDGIKELREKDLVSVRGDGKGERKPHERIYDYDV 259
>At1g70160.1 68414.m08073 expressed protein similar to hypothetical
protein GI:4455225 from [Arabidopsis thaliana]
Length = 523
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/81 (25%), Positives = 30/81 (37%)
Frame = +3
Query: 57 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 236
NE+ E IV + E+ LKD + D + T A E + L K
Sbjct: 272 NEKGEEIIVVIPWDEWWELTLKDNSNPQVALLPLHPDIRAKFNNTAAWEYARSMLGKPYG 331
Query: 237 KHNRLFMKAQPMPDGLPEDID 299
HN +F + D P +D
Sbjct: 332 YHNMIFSWIDTLGDNYPPPLD 352
>At5g17300.1 68418.m02026 myb family transcription factor similar to
CCA1 [Arabidopsis thaliana] GI:4090569; contains Pfam
profile PF00249: Myb-like DNA-binding domain
Length = 387
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 205 DSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPAT 80
D+ + S T GS+ L + + S +RSL +S S PA T
Sbjct: 154 DTQSPTSVLSTVGSEALCSLDSSSPNRSLSPVSSASPPAALT 195
>At5g15580.1 68418.m01824 expressed protein unknown protein F14P3.18
- Arabidopsis thaliana, EMBL:AC009755
Length = 927
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 308 RESPR*LQDSRSVSYRKVRIRCYRSP*DLV 397
+E+PR DSRS S+R R C P +LV
Sbjct: 223 KETPRLSLDSRSNSFRSARSSCSPEPQELV 252
>At1g51930.1 68414.m05854 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 132
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 54 INEESGEHIVAGAGELHLEICLKDLEEDH 140
I EE G G G+ ICL++ E+DH
Sbjct: 63 IKEEEGGREEEGGGKRFCPICLEEYEDDH 91
>At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 161
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 87 GAGELHLEICLKDLEEDHACIPIKK 161
G E+ ICL++LE+ H I IKK
Sbjct: 111 GFDEIGCSICLEELEDGHEIIRIKK 135
>At3g59570.1 68416.m06647 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 720
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 191 GLTVRHDRVRLLDWNASMVLLKILKTDLKMEFSSTSDNV 75
G TV+ DRV W +++ +++TD +EF N+
Sbjct: 348 GGTVKEDRVSEWLWTLHRIVVDVVRTDSHLEFYEDPGNL 386
>At1g70890.1 68414.m08179 major latex protein-related / MLP-related
low similarity to major latex protein {Papaver
somniferum}[GI:294062] ; contains Pfam profile PF00407:
Pathogenesis-related protein Bet v I family
Length = 158
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -1
Query: 272 HGLSLHE*TVVLVGRL*ETELVRFLSYG-LTVRHDRVRLLDWNASMVLLKILKTDLKMEF 96
HG LHE VG + + +++ G LTV +++ +D +++ K+L+ DL E+
Sbjct: 44 HGCELHEGDWGKVGSI---VIWKYVHDGKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEY 100
Query: 95 SS 90
S
Sbjct: 101 KS 102
>At5g38500.1 68418.m04654 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 411
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 129 EEDHACIPIKKSDPVVSYRETVAEESD--QLCLSKSPNKHNRLFMKAQPMPDGL 284
EE + +K + S ++TV+EE D + LS P K +K Q P+G+
Sbjct: 25 EEQRRRLLAEKREDSKSQKKTVSEEDDSEKRFLSHVPRKKRSSLVKRQQKPNGV 78
>At5g07990.1 68418.m00930 flavonoid 3'-monooxygenase / flavonoid
3'-hydroxylase (F3'H) / cytochrome P450 75B1 (CYP75B1) /
transparent testa 7 protein (TT7) identical to SP|Q9SD85
Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid
3'-hydroxylase) (AtF3'H) (Cytochrome P450 75B1)
(TRANSPARENT TESTA 7 protein) {Arabidopsis thaliana};
similar to gi:10334806, gi:10334808
Length = 513
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 405 PEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEE 530
P G G I S G++ + + ++V GF W GV E+
Sbjct: 437 PFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEK 478
>At3g42790.1 68416.m04474 PHD finger family protein contains
PHD-finger domain, INTERPRO:IPR001965
Length = 250
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 105 LEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGL 284
+E KD + I + V + + E + LCL PN+ + + A+ +P L
Sbjct: 13 VEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWEVNLPAEEVPPEL 72
Query: 285 PE 290
PE
Sbjct: 73 PE 74
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,859,519
Number of Sequences: 28952
Number of extensions: 386942
Number of successful extensions: 1192
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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