Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0885
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   150   1e-38
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   150   1e-38
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   136   1e-34
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.4  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   4.6  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  150 bits (363), Expect = 1e-38
 Identities = 69/88 (78%), Positives = 79/88 (89%)
 Frame = +3

Query: 414 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 593
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 594 FDNRMVNHFVQEFKRKYKKDLATNKRAL 677
           FDNR+V +  Q+FK+K+K D++ N RAL
Sbjct: 61  FDNRLVEYCTQDFKKKHKADISGNPRAL 88



 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = +2

Query: 680 RLRTACERAKRTLSSSTQASIEI 748
           RLRT CERAKRTLSS+TQASIEI
Sbjct: 90  RLRTQCERAKRTLSSATQASIEI 112


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  150 bits (363), Expect = 1e-38
 Identities = 69/88 (78%), Positives = 79/88 (89%)
 Frame = +3

Query: 414 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 593
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 594 FDNRMVNHFVQEFKRKYKKDLATNKRAL 677
           FDNR+V +  Q+FK+K+K D++ N RAL
Sbjct: 61  FDNRLVEYCTQDFKKKHKADISGNPRAL 88



 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = +2

Query: 680 RLRTACERAKRTLSSSTQASIEI 748
           RLRT CERAKRTLSS+TQASIEI
Sbjct: 90  RLRTQCERAKRTLSSATQASIEI 112


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  136 bits (330), Expect = 1e-34
 Identities = 63/110 (57%), Positives = 86/110 (78%)
 Frame = +3

Query: 414 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 593
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGED 59

Query: 594 FDNRMVNHFVQEFKRKYKKDLATNKRALSVCVLHVKGQRGPCHRPHKRAL 743
           FD +++++F++  K+K+KKD+  +K+AL      V+  +      HK  L
Sbjct: 60  FDQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTL 109



 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +2

Query: 629 VQEEIQKGPRYQQESS*RLRTACERAKRTLSSSTQASIEI 748
           V+++ +K  R  +++  +LR   E+AKR LSS  + ++ I
Sbjct: 72  VKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTI 111


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +3

Query: 186 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 311
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 369 TKDAGTISGLNVLRIINEPTAA 434
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
 Frame = +2

Query: 257 FH-GAYENEGNCRSL------SRQNCAECSYHGSRVLQ*LSKTSHKRCR 382
           FH GA+  EG C+S       +  + +EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,129
Number of Sequences: 336
Number of extensions: 4165
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)