Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0885
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 390 e-110
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 378 e-106
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 342 3e-95
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 314 9e-87
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 263 2e-71
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 155 6e-39
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 112 4e-26
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 77 2e-15
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 31 0.23
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.31
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 30 0.31
SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch... 29 0.71
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 0.94
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.2
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 27 3.8
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 5.0
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 25 8.7
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 25 8.7
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 25 8.7
SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces ... 25 8.7
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 25 8.7
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al... 25 8.7
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 8.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 390 bits (961), Expect = e-110
Identities = 183/225 (81%), Positives = 204/225 (90%)
Frame = +3
Query: 3 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 182
RTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+
Sbjct: 34 RTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVI 93
Query: 183 SDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQR 362
S GKP ++V YKGE KTF PEE+SSMVL KM+ETAEAYLG V +AV+TVPAYFNDSQR
Sbjct: 94 SKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQR 153
Query: 363 QATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG 542
QATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGTFDVS+LTIE+G
Sbjct: 154 QATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEG 213
Query: 543 IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRAL 677
IFEVK+TAGDTHLGGEDFD+R+VNHF+QEFKRK KKD+ N RA+
Sbjct: 214 IFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAV 258
Score = 45.6 bits (103), Expect = 8e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 680 RLRTACERAKRTLSSSTQASIEI 748
RLRTACERAKRTLSSS QASIEI
Sbjct: 260 RLRTACERAKRTLSSSAQASIEI 282
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 378 bits (931), Expect = e-106
Identities = 178/225 (79%), Positives = 200/225 (88%)
Frame = +3
Query: 3 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 182
RTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+
Sbjct: 34 RTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVI 93
Query: 183 SDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQR 362
GKP I+V +KGE KTF PEE+SSMVL KM+E+AEA+LG V +AV+TVPAYFNDSQR
Sbjct: 94 EKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQR 153
Query: 363 QATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG 542
QATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGTFDVS+LTIE+G
Sbjct: 154 QATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEG 213
Query: 543 IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRAL 677
IFEVK+TAGDTHLGGEDFD+R+VNHF QEFKRK KKD+ N RA+
Sbjct: 214 IFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAV 258
Score = 45.6 bits (103), Expect = 8e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 680 RLRTACERAKRTLSSSTQASIEI 748
RLRTACERAKRTLSSS QASIEI
Sbjct: 260 RLRTACERAKRTLSSSAQASIEI 282
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 342 bits (841), Expect = 3e-95
Identities = 160/225 (71%), Positives = 188/225 (83%)
Frame = +3
Query: 3 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 182
RTTPS+VAFT+TERL+GDAAKNQ AMNP NT+FDAKRLIGR++ED Q D+KHWPF+V+
Sbjct: 38 RTTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVI 97
Query: 183 SDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQR 362
+ G P I+V Y GE K F +E+S+MVLTKMKE +EA L K V+ AVITVPAYF+DSQR
Sbjct: 98 DNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQR 157
Query: 363 QATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG 542
ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTFDVS+L I+ G
Sbjct: 158 AATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGG 217
Query: 543 IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRAL 677
+FEV +TAGDTHLGGEDFDN +V HF+QEFKRK K D++ + RAL
Sbjct: 218 VFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRAL 262
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +2
Query: 680 RLRTACERAKRTLSSSTQASIEI 748
RLR+ACERAKR LSS TQ ++E+
Sbjct: 264 RLRSACERAKRALSSVTQTTVEV 286
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 314 bits (771), Expect = 9e-87
Identities = 141/225 (62%), Positives = 188/225 (83%)
Frame = +3
Query: 3 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 182
R TPSYVAFT+ ERL+G+AAKNQ NP NTIFD KRLIGRKF++ T+ D+K +PF +V
Sbjct: 67 RITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIV 126
Query: 183 SDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQR 362
+D +P ++V G+ K F PEE+S+M+L+KMK+TAEAYLGK V +AV+TVPAYFND+QR
Sbjct: 127 NDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQR 186
Query: 363 QATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG 542
QATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGGTFDVS+L+I++G
Sbjct: 187 QATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLSIDNG 245
Query: 543 IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRAL 677
+FEV +T+GDTHLGGEDFDNR++N+ + + RK D+ + +A+
Sbjct: 246 VFEVLATSGDTHLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAM 290
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 680 RLRTACERAKRTLSSSTQASIEI 748
+L+ E+AKRTLSS IEI
Sbjct: 292 KLKREVEKAKRTLSSQKSVRIEI 314
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 263 bits (645), Expect = 2e-71
Identities = 128/226 (56%), Positives = 165/226 (73%), Gaps = 1/226 (0%)
Frame = +3
Query: 3 RTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 179
RTTPS VAFT D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ D+K P+++
Sbjct: 82 RTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKI 141
Query: 180 VSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 359
V + KT+ P ++ +L+KM+ETA YLGK V+NAV+TVPAYFNDSQ
Sbjct: 142 VEHSNGD---AWLEARGKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQ 198
Query: 360 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 539
RQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTFD+SIL + +
Sbjct: 199 RQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGTFDISILELNN 256
Query: 540 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRAL 677
G+FEV+ST GDTHLGGEDFD +V H V+ FK+ DL+ ++ A+
Sbjct: 257 GVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAV 302
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 155 bits (376), Expect = 6e-39
Identities = 85/229 (37%), Positives = 130/229 (56%), Gaps = 5/229 (2%)
Frame = +3
Query: 3 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEV 179
R+TPS V++ + R +G+AAK+ A N NT+ KRL GR ++D ++ + ++
Sbjct: 37 RSTPSLVSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKL 96
Query: 180 VSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 359
G KV Y E+ F ++ + TK+K AEA L +V + VI++PA+F D Q
Sbjct: 97 TEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQ 156
Query: 360 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGGTFDVSIL 527
R+A +A I+GLN LR++N+ AAA+ YG+ K E R V I D G + VSI+
Sbjct: 157 RRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIV 216
Query: 528 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRA 674
G F +KST D +LG + D ++++F EFK KYK D+ +N +A
Sbjct: 217 EFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKA 265
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 112 bits (270), Expect = 4e-26
Identities = 63/232 (27%), Positives = 126/232 (54%), Gaps = 6/232 (2%)
Frame = +3
Query: 3 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 182
R PS +++ + G A+ Q+ N +N++ + + L+G+ ++ T+ H+ V
Sbjct: 56 RQIPSILSYHGDQEYHGVQARGQLVRNADNSVTNFRDLLGKSHDELTLHHC--HYSANPV 113
Query: 183 SDGGKPKIKVAYKGED------KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 344
+ G+ K+ + ++ K E S L ++ E+AE +LG V V++VP Y
Sbjct: 114 NVEGQIGFKITVQEDEESDPKEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVY 173
Query: 345 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 524
F D+QR+A + A +GL VL++I++P A +A ++ ++ V++ + G +VS+
Sbjct: 174 FTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGATRSEVSV 233
Query: 525 LTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALS 680
++++ G+ + ++ D +LGGE + +VN F +EF++K D N R+L+
Sbjct: 234 VSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLA 285
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 77.4 bits (182), Expect = 2e-15
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 15/241 (6%)
Frame = +3
Query: 3 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRK-FEDATVQADMKHWPFEV 179
R S VAF ER+ G A N P ++I + K L+ E VQ +P
Sbjct: 55 RKEQSAVAFKGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQ 114
Query: 180 VSDGGKPKIKVAYK-GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDS 356
+ + + +++ +++ + EE+ +M + AE + + + V+TVP +FN+
Sbjct: 115 LVENEETTSGISFVISDEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNEL 174
Query: 357 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGERNVLIFDLGGGTFDVSIL-- 527
QR +A I +VL +I++ A AI Y L + T +I+D G G+ +++
Sbjct: 175 QRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSGSGSTSATVISF 234
Query: 528 -TIE-------DGIFEVKSTA-GDT-HLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRAL 677
T+E I +++ A G T L G + + +++ F +K+ DL+ N RAL
Sbjct: 235 DTVEGSSLGKKQNITRIRALASGFTLKLSGNEINRKLIGFMKNSFYQKHGIDLSHNHRAL 294
Query: 678 S 680
+
Sbjct: 295 A 295
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 30.7 bits (66), Expect = 0.23
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 749 LSQCSLVWTMTRSSLPFHMQYANAKSSL 666
+S C ++WTM+ PFHM A +S+
Sbjct: 265 MSFCGVIWTMSGYDAPFHMSEETANASV 292
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.31
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 21 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 200
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 201 KIKVAYKGEDKTFFPE 248
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 30.3 bits (65), Expect = 0.31
Identities = 36/157 (22%), Positives = 65/157 (41%)
Frame = -3
Query: 598 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGS 419
S SS P S + DF+S I + + +S +P S +S+ S S P + + ++ S
Sbjct: 541 SSSSIP--TSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSST--SSPSSTSLSISS 596
Query: 418 LMIRRTFKPEMVPASFVACL*ESLKYAGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGK 239
TF S + I++ T+L + S + +S+ + S
Sbjct: 597 SSTSSTFSSAST---------SSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSS 647
Query: 238 KVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSN 128
+LSS + + + SL+T S+ T+ SS+
Sbjct: 648 SILSSSIST---IPISSSLSTYSSSVIPSSSTLVSSS 681
>SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 891
Score = 29.1 bits (62), Expect = 0.71
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Frame = -3
Query: 673 ALLLVARSFLYFLLNSWTKWFTMRLSKSSPP-KWVSP--AVDFTSKIPSSMVRMDTSKVP 503
AL+ +A LY LLN K S SSPP SP FT S+ M +S P
Sbjct: 679 ALITIALDSLYVLLNMRAKSTPNSTSFSSPPTPHRSPFSGQAFTGMGLSNYSLMSSSSFP 738
Query: 502 PPRSK-ISTFRSPVPFL-SRP*AIAAAVGSLMIRRTFKP-EMVPASFVACL*ESLK 344
+S S F S P + ++ +IA+ M+ P + +PA C SL+
Sbjct: 739 SAQSSPTSPFLSGTPSIANQSSSIASLQFGRMVDSLVGPVQPIPAQTTGCSVHSLQ 794
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.7 bits (61), Expect = 0.94
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 598 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 488
+KSSP K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 598 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 452
+ S PP P + IP PPPRS ST R P P S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 673 ALLLVARSFLYFLLNSWTKWFTMRLSKSSPPKWVSPAVDFTS 548
AL+ VAR F + LLN+ + +T+R+ + V + FTS
Sbjct: 726 ALVKVARDFGFTLLNTKNRRYTIRIRGENKNFRVLDIIPFTS 767
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.2 bits (55), Expect = 5.0
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +3
Query: 450 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 620
LDK G+ I GG T SIL +GI VK E F+N F
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKF 104
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 599 QSHGEPLCPGVQEEIQKGPRYQQESS 676
QS G+PL PG + GP + SS
Sbjct: 599 QSIGDPLPPGAMANVSAGPSSVRSSS 624
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 25.4 bits (53), Expect = 8.7
Identities = 18/72 (25%), Positives = 29/72 (40%)
Frame = -3
Query: 586 PPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGSLMIR 407
PP S K P V VP P S S R P+L I+ + G+L+++
Sbjct: 416 PPSIASSPESKRRKCPKKFVARPP--VPHPTSLYSQIRIGCPYLKPKLVISKSFGTLIVK 473
Query: 406 RTFKPEMVPASF 371
+ ++ +F
Sbjct: 474 NHNQLSLLKCTF 485
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 634 LNSWTKWFTMRLSKSSPPKWVSPAVDF 554
LN K+ SK P W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 25.4 bits (53), Expect = 8.7
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 280 RKLPKLISAKLCRMQLSRFPRTSMTLKDKPQKMQVP-SQA*TFSESSMNP 426
RK+ + + M+ RFP +S K K Q+P S T + SS +P
Sbjct: 98 RKIQDSLIRQRTTMRQGRFPSSSSEFPPKNSKYQLPGSMPNTGASSSQDP 147
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 25.4 bits (53), Expect = 8.7
Identities = 28/138 (20%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Frame = +3
Query: 255 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAA 434
SS+ + ++KE + T ++ + ++N +Q + DA + L + +E A
Sbjct: 15 SSLKVPEIKEKEKINAINTYEDVANSEDEFYN-AQDKILFDADNGEQADELELSDEELVA 73
Query: 435 AIAYGLDKKGTGERNVLIFD-LGGGTFDVSILTIEDGIFEVKS--TAGDTHLGGEDFDNR 605
+ ++ G E N+ + L G D E+ +++ K + ++ GG+D+DN
Sbjct: 74 LESSSDEEDGNAEENLSENEELSGKKKDA---VNEEELYDNKGWGRSAKSYYGGDDYDNE 130
Query: 606 MVNHFVQEFKRKYKKDLA 659
+ EF + ++ A
Sbjct: 131 DYSEEDDEFDARMEEQEA 148
>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 252 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 374
++ ++ K A LGK + FN+SQ+QAT+
Sbjct: 57 INEPIVYKSSNNAYIVLGKVTVEDMAAQARAFNESQKQATE 97
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 502 AVPSTCPSLPSRMVSSR*NPPPATPTW 582
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,258,209
Number of Sequences: 5004
Number of extensions: 69886
Number of successful extensions: 269
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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