Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0885
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 393 e-110
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 392 e-109
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 318 3e-87
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 247 9e-66
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 186 2e-47
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 4e-40
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 103 1e-22
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 7e-19
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 54 1e-07
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 32 0.57
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.3
SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) 30 2.3
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.3
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 29 3.0
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.0
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 4.0
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 4.0
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 29 4.0
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 28 7.0
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 9.3
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 9.3
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 393 bits (968), Expect = e-110
Identities = 183/225 (81%), Positives = 206/225 (91%)
Frame = +3
Query: 3 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 182
RTTPSYVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+D V DM HWPF V+
Sbjct: 36 RTTPSYVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVI 95
Query: 183 SDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQR 362
+G +PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+DSQR
Sbjct: 96 REGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQR 155
Query: 363 QATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG 542
QATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+LTIEDG
Sbjct: 156 QATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDG 215
Query: 543 IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRAL 677
IFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+ NKRA+
Sbjct: 216 IFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPNKRAM 260
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +2
Query: 680 RLRTACERAKRTLSSSTQASIEI 748
RLRTACERAKRTLSSSTQASIEI
Sbjct: 262 RLRTACERAKRTLSSSTQASIEI 284
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 392 bits (966), Expect = e-109
Identities = 184/226 (81%), Positives = 208/226 (92%), Gaps = 1/226 (0%)
Frame = +3
Query: 3 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 182
RTTPSYV FTDTERL+GDAAKNQVA+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++
Sbjct: 36 RTTPSYVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKII 95
Query: 183 SDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQR 362
SD KPKI+V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFNDSQR
Sbjct: 96 SDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQR 155
Query: 363 QATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG 542
QATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+DG
Sbjct: 156 QATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDG 215
Query: 543 -IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRAL 677
+FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD++ N RA+
Sbjct: 216 SLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAM 261
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +2
Query: 680 RLRTACERAKRTLSSSTQASIEI 748
RLRTACERAKRTLSSST+ASIE+
Sbjct: 263 RLRTACERAKRTLSSSTEASIEV 285
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 318 bits (781), Expect = 3e-87
Identities = 150/226 (66%), Positives = 187/226 (82%), Gaps = 1/226 (0%)
Frame = +3
Query: 3 RTTPSYVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 179
R TPSYVAFT+ ERLIGD AKNQ+ NP NT+FDAKRLIGR ++D +VQ D+K +PF+V
Sbjct: 733 RITPSYVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKV 792
Query: 180 VSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 359
V KP ++V K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+Q
Sbjct: 793 VDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQ 852
Query: 360 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 539
RQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LTI++
Sbjct: 853 RQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDN 911
Query: 540 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRAL 677
G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K++ + RA+
Sbjct: 912 GVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRKDNRAV 957
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 247 bits (604), Expect = 9e-66
Identities = 119/143 (83%), Positives = 130/143 (90%)
Frame = +3
Query: 249 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 428
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 429 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 608
AAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN M
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNM 330
Query: 609 VNHFVQEFKRKYKKDLATNKRAL 677
V+ FV++FK+KYKKD+ NKRAL
Sbjct: 331 VDFFVKQFKQKYKKDITPNKRAL 353
Score = 196 bits (478), Expect = 2e-50
Identities = 103/152 (67%), Positives = 113/152 (74%), Gaps = 25/152 (16%)
Frame = +3
Query: 3 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 182
RTTPSYVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV
Sbjct: 36 RTTPSYVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVV 95
Query: 183 SDGGKPKIKVAYKGEDKTFFPEEV-------------------------SSMVLTKMKET 287
++ G+PK+KV YKGE KTFF EEV SSMVL KMKET
Sbjct: 96 NEAGRPKVKVEYKGETKTFFAEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKET 155
Query: 288 AEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 383
AEAYLG V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 156 AEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +2
Query: 680 RLRTACERAKRTLSSSTQASIEI 748
RLRTACERAKRTLSSSTQASIEI
Sbjct: 355 RLRTACERAKRTLSSSTQASIEI 377
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 186 bits (453), Expect = 2e-47
Identities = 96/223 (43%), Positives = 137/223 (61%), Gaps = 1/223 (0%)
Frame = +3
Query: 3 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 182
+ PS VAFTD L+G+ A +Q +NP NTI+DAKR IG+ F + K + F V
Sbjct: 65 KVVPSLVAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVT 124
Query: 183 SDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 359
+D G V KG PEE+ V+ K++ AE L TV AV++VPA F+ Q
Sbjct: 125 TDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQ 184
Query: 360 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 539
R AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+
Sbjct: 185 RNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQG 243
Query: 540 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNK 668
G+F + AG+ LGG+DF+ R + + +Q +++ + L ++
Sbjct: 244 GMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQLTCSE 286
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 161 bits (392), Expect = 4e-40
Identities = 86/202 (42%), Positives = 122/202 (60%), Gaps = 4/202 (1%)
Frame = +3
Query: 81 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 257
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 258 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 437
+M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA +
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVS 237
Query: 438 IAYGLDKKG---TGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 608
+AYG+ K+ RNV+ D+G + V I G +V STA + +LGG DFD +
Sbjct: 238 LAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVL 297
Query: 609 VNHFVQEFKRKYKKDLATNKRA 674
V HF QEFK KYK D+ ++ +A
Sbjct: 298 VEHFAQEFKTKYKIDVHSSIKA 319
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 3 RTTPSYVAFTDTERLIGDAAKNQ 71
R TPS+V+ D +RLIG + KNQ
Sbjct: 33 RCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 103 bits (248), Expect = 1e-22
Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 26/118 (22%)
Frame = +3
Query: 204 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 383
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 384 TISGLN------------------------VLRIINEPTAAAIAYGLDKK--GTGERN 479
TI+GL+ VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 62 TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 91.5 bits (217), Expect = 7e-19
Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 18/179 (10%)
Frame = +3
Query: 198 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 377
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 378 AGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL------ 527
A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G + +I+
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIVGYSMTK 186
Query: 528 TIEDGIFE------VKSTAGDTHLGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALS 680
T + GI E +K D LGG D R+ +H VQ FK+ K+K ++ + RA++
Sbjct: 187 TKDRGISETAPQLVIKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMA 245
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 85.8 bits (203), Expect = 3e-17
Identities = 36/66 (54%), Positives = 51/66 (77%)
Frame = +3
Query: 480 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 659
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
Query: 660 TNKRAL 677
+ AL
Sbjct: 62 KDSMAL 67
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Frame = +3
Query: 471 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR---- 638
+ VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLL 212
Query: 639 -KYKKDLATNKRA 674
K+K D TNKR+
Sbjct: 213 WKWKIDPLTNKRS 225
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 429 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 596
A A L +G E + D G GT VS + +E+G +++ D H+ G F
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 477 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 596
+ LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +3
Query: 417 NEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 596
N P A + GT E +I DLG G + + + E G V +TH+ G F
Sbjct: 3007 NAPVGKVSATVIAPSGT-ESKAVISDLGKGNYAIRFVPKEFGDHLVNVKFDETHIPGSPF 3065
Query: 597 DNRM 608
R+
Sbjct: 3066 KIRV 3069
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 31.9 bits (69), Expect = 0.57
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = -3
Query: 661 VARSFLYFLLNSWTKWFTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIS 482
V R+ + N+ +F +L P KW D T I +V PPPR +
Sbjct: 543 VGRALGFERFNALGFYFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRDGTA 602
Query: 481 TFRSPVPFLSRP 446
+ +PF+S+P
Sbjct: 603 KL-ATLPFVSQP 613
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 480 VLIFDLGGGTFDVSILTIEDGIFEVK 557
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)
Length = 1318
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = -3
Query: 661 VARSFLYFLLNSWTKWFTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIS 482
V R+ + N+ + +L P KW P D +S P V + + PP S
Sbjct: 336 VGRALGFERFNALGYYLATKLQTEDPTKW-PPRYDDSSHFPHLWVVLSYDESTPPPRDGS 394
Query: 481 TFRSPVPFLSRP 446
+ PF+S+P
Sbjct: 395 AKPATQPFVSQP 406
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 486 IFDLGGGTFDVSILTIEDGIFEV 554
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 29.5 bits (63), Expect = 3.0
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Frame = +2
Query: 227 RQNLFPRGSQFHGAYENEGNCRSLSRQNCAECSY---HG----SRVLQ*LSKTSHKRCRY 385
R+++FP+G H +Y C L R S+ HG S L+ K + C +
Sbjct: 1366 RRHVFPKGHVAHRSYHVYSICALLRRYRLTHSSFLLHHGQTGNSGTLRSFCKFIMRECGW 1425
Query: 386 HLRLERSPN---HQ*T----HCCCDCLRS*QKGYW 469
+R HQ CCC C R + YW
Sbjct: 1426 RVRAGTDACVIFHQFDDAIRECCCLCCRGRRGKYW 1460
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 577 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 461
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 102 RILCCWGSSPPGSWRH 55
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 102 RILCCWGSSPPGSWRH 55
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Frame = +3
Query: 264 VLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 413
V K T+E Y+G T + NA +T+P YF + +K G G+ +
Sbjct: 994 VTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--A 1051
Query: 414 INEPTAAAIAYGLDKKGTG 470
+++ I+Y LD+K TG
Sbjct: 1052 MSKERNQEISYKLDRKWTG 1070
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 493 TSAAVPSTCPSLPSRMVSSR*NPPPATP 576
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 292 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 113
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 112 RLASNIVL 89
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 554 HLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVSNRSSSG 423
H+EDT DG DG E +E K + S SN+ G
Sbjct: 486 HIEDTTWDGSDGQREAGFSEQKAERSSSGGNRTTHGASNKPRDG 529
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = -3
Query: 622 TKWFTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP* 443
+ W KS K P +S + SS TSK PP + +ST SP
Sbjct: 1244 SSWMVTNCQKSC--KRCPPEPPTSSIMQSSSNIPTTSKTPPSSTCLSTAVSPAAGADSNN 1301
Query: 442 AIAAAVGSLMIRRTF 398
A+ A+ SL++ F
Sbjct: 1302 AVNVAISSLVLPSLF 1316
>SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 27.9 bits (59), Expect = 9.3
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 6/210 (2%)
Frame = -3
Query: 631 NSWTKWFTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 452
NS T ++ SSP + +V +S SSM T+ P S ++T S L+
Sbjct: 658 NSTTSTLAEAVAISSPVLPTTTSVLTSSMESSSMATTSTTSAPSLESSMTT-NSTTSTLA 716
Query: 451 RP*AIAAAVG----SLMIRRTFKPEMVPASFVACL*ESLKYAGTVITAFCTVLPR*ASAV 284
+ AI+++V S++ M S SL+ + T + T+ A +
Sbjct: 717 QAVAISSSVSPTTTSVLTSSMEFSSMATTSTTTT--PSLESSMTTNSTTSTLAEAVAISS 774
Query: 283 SFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRP-MRRL 107
+ +T LTSS + + T L S+TT+ ++ SS + P +
Sbjct: 775 PVLPTTTSVLTSSMESSSIATTSTTSTPSLESSMTTNSTTSTLAEAVAISSPVLPTTTSV 834
Query: 106 ASNIVLLGFIATWFLAASP-MRRSVSVNAT 20
++ + IAT ++P + S++ N+T
Sbjct: 835 LTSSMESSSIATTSTTSTPSLESSMTTNST 864
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +2
Query: 29 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 169
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 166 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 20
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,445,382
Number of Sequences: 59808
Number of extensions: 564579
Number of successful extensions: 1934
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1923
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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