Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0885
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...   137   4e-34
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   3.3  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   3.3  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   5.8  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   5.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.8  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   7.6  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   7.6  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score =  137 bits (331), Expect = 4e-34
 Identities = 65/75 (86%), Positives = 71/75 (94%)
 Frame = +3

Query: 318 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 497
           +AVITVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK   GERNVLIFDL
Sbjct: 1   DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDL 60

Query: 498 GGGTFDVSILTIEDG 542
           GGGTFDVSILTI++G
Sbjct: 61  GGGTFDVSILTIDEG 75


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -3

Query: 577 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 479
           W+ P    T+ +P++         PPP +  +T
Sbjct: 221 WIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTT 253


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -3

Query: 577 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 479
           W+ P    T+ +P++         PPP +  +T
Sbjct: 222 WIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTT 254


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 577 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 479
           W+ P    T+  P++         PPP +  +T
Sbjct: 222 WIDPTATTTTHAPTTTTTWSDQPPPPPTTTTTT 254


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 577 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 479
           W+ P    T+ +P +         PPP +  +T
Sbjct: 222 WIDPTATTTTHVPPTTTTWSDLPPPPPTTTTTT 254


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 617  LCPGVQEEIQKGPRYQQESS*RL 685
            L PG+QE I +  R QQE+  R+
Sbjct: 2077 LSPGLQEVIDRFVRIQQENGHRI 2099


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/37 (24%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 619 KWFTMRLSKSSPPKWVSPAVDFTSKIPSS-MVRMDTS 512
           +WF  +++ S+  +WV+   +   ++  + +VR+D S
Sbjct: 426 RWFAQQITSSTDARWVAIQGNPVVRVQKTVLVRLDRS 462


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 14/70 (20%)
 Frame = -3

Query: 574 VSPAVDFTSKIPSSMVRMDTSKVPPP---RSKI---------STFRS-PVPF-LSRP*AI 437
           +SP  +F++    S++ ++ +  PPP   RSK           T RS PVPF L+ P A 
Sbjct: 439 ISPPAEFSNGSSKSLLLLNGNGPPPPVPERSKTPNSIYLSQNGTPRSTPVPFALAPPPAA 498

Query: 436 AAAVGSLMIR 407
           + A G   +R
Sbjct: 499 SPAFGDRSVR 508


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 843,067
Number of Sequences: 2352
Number of extensions: 17650
Number of successful extensions: 61
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)