Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0880
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17DQ2 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_A5DZQ8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.21
UniRef50_A4HF62 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_P46589 Cluster: Adherence factor; n=2; Candida albicans... 36 1.1
UniRef50_A2SJS0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q2UKV0 Cluster: Predicted RNA-binding protein; n=17; Fu... 35 1.5
UniRef50_Q8A623 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q24175 Cluster: CG6157-PA; n=3; Sophophora|Rep: CG6157-... 34 2.6
UniRef50_Q16YZ3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_A7STE7 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.4
UniRef50_P0A5D9 Cluster: Uncharacterized protein Rv1148c/MT1183;... 34 3.4
UniRef50_UPI00006CFCBF Cluster: B-box zinc finger family protein... 33 4.5
UniRef50_Q7JR34 Cluster: GH08706p; n=3; Coelomata|Rep: GH08706p ... 33 4.5
UniRef50_Q23BR6 Cluster: PX domain containing protein; n=1; Tetr... 33 4.5
UniRef50_UPI00006CFEE2 Cluster: hypothetical protein TTHERM_0071... 33 6.0
UniRef50_Q4TC05 Cluster: Chromosome undetermined SCAF7064, whole... 33 6.0
UniRef50_Q4S905 Cluster: Chromosome 7 SCAF14703, whole genome sh... 33 6.0
UniRef50_Q4S066 Cluster: Chromosome undetermined SCAF14784, whol... 33 6.0
UniRef50_A5G0Z4 Cluster: Uncharacterized protein-like protein; n... 33 6.0
UniRef50_Q5KES5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_UPI00015B42DE Cluster: PREDICTED: similar to conserved ... 33 7.9
UniRef50_UPI00006CD15B Cluster: hypothetical protein TTHERM_0012... 33 7.9
UniRef50_A0GBP9 Cluster: Rne; ribonuclease E; n=1; Burkholderia ... 33 7.9
UniRef50_Q4CQ86 Cluster: ATPase, putative; n=3; Trypanosoma cruz... 33 7.9
UniRef50_Q0U8M3 Cluster: Putative uncharacterized protein; n=3; ... 33 7.9
UniRef50_P20659 Cluster: Protein trithorax; n=4; Drosophila mela... 33 7.9
>UniRef50_Q17DQ2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 631
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Frame = +3
Query: 306 THSAKFPIEREVILSSGEKNSKVPILQEAR-------KRGRLGAVAPDTPPKTLSAWTHS 464
THS+KFPIERE++LSS + SK+P++ + R R + AV PD P K AW +
Sbjct: 36 THSSKFPIERELVLSSNKNASKIPLMHDNRNTSIPLLNRSTVSAVGPDLPTKQTQAWNQA 95
Query: 465 E 467
+
Sbjct: 96 Q 96
>UniRef50_A5DZQ8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 324
Score = 37.9 bits (84), Expect = 0.21
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +3
Query: 420 APDTPPKTLSAWTHSENQAGTSADYRQYHENYNYNMQQNQSGTRNGNYDSPKPP 581
A +PP S+ TH+ N +Y N NYN QNQ+ T N N+ S P
Sbjct: 121 AEHSPP---SSPTHASNHYSRGNNYHSQSHNPNYNQNQNQNHTSNHNHHSMNKP 171
>UniRef50_A4HF62 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 1539
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 251 TGGGAAWSPSASRTCRPAHTLRKISYRTRSDI---IFRRKEFQSANTSRGSKTRQTRR 415
+ AA +AS CRP+ T + SY+T + + RR++ S T RGS T +R
Sbjct: 570 SSSAAAACAAASVICRPSQTCTRDSYKTSASVAPATSRRRKNSSVGTGRGSDTTTLKR 627
>UniRef50_P46589 Cluster: Adherence factor; n=2; Candida
albicans|Rep: Adherence factor - Candida albicans
(Yeast)
Length = 612
Score = 35.5 bits (78), Expect = 1.1
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Frame = +3
Query: 315 AKFPIEREVILSSG-EKNSKVPILQEARKRGRLGAVAPDTPPKTLSAWTHSENQAGTSAD 491
A F + E I+ S EK +++ ++ + A A +PP + S + NQ
Sbjct: 429 ASFGVNEETIIESQKEKKLTEKTIEQREQQRKKRASANHSPPDSDSITNTNNNQQEVKYI 488
Query: 492 YRQYHENYNYNMQQNQ-SGTRNGNYDSPKPPVPAKTYGTKIDATNNS 629
QY +NY + NQ +G+ S PP P++ ++ N +
Sbjct: 489 DPQY-KNYQSQLMPNQNTGSGATKISSTTPPPPSQALSNNVNTMNKN 534
>UniRef50_A2SJS0 Cluster: Putative uncharacterized protein; n=1;
Methylibium petroleiphilum PM1|Rep: Putative
uncharacterized protein - Methylibium petroleiphilum
(strain PM1)
Length = 159
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 534 SAACCNCSSRGIVCSRPMCRLGSPSESRLRVFLVG 430
S +C CS I+ SR +CR+G+P ESR R+ G
Sbjct: 86 SNSCARCSKPLILGSRNVCRVGTPGESRRRLGRAG 120
>UniRef50_Q2UKV0 Cluster: Predicted RNA-binding protein; n=17;
Fungi/Metazoa group|Rep: Predicted RNA-binding protein -
Aspergillus oryzae
Length = 707
Score = 35.1 bits (77), Expect = 1.5
Identities = 24/69 (34%), Positives = 31/69 (44%)
Frame = +3
Query: 384 QEARKRGRLGAVAPDTPPKTLSAWTHSENQAGTSADYRQYHENYNYNMQQNQSGTRNGNY 563
++A KR R V D+ PK L T + ADY + ENYN N +GNY
Sbjct: 18 KDAAKRKR-EEVPEDSLPKRLKPSTDESTEINQGADYIPFDENYNENY--------DGNY 68
Query: 564 DSPKPPVPA 590
D + PA
Sbjct: 69 DENQADAPA 77
>UniRef50_Q8A623 Cluster: Putative uncharacterized protein; n=1;
Bacteroides thetaiotaomicron|Rep: Putative
uncharacterized protein - Bacteroides thetaiotaomicron
Length = 429
Score = 34.3 bits (75), Expect = 2.6
Identities = 26/94 (27%), Positives = 39/94 (41%)
Frame = +3
Query: 330 EREVILSSGEKNSKVPILQEARKRGRLGAVAPDTPPKTLSAWTHSENQAGTSADYRQYHE 509
+ + L G+ ++ + A +RG PD P H E Q G SADY Q E
Sbjct: 220 DARLALQDGKPKAETEGRENAEERGSGRRGRPDRP--------HREKQEGLSADYSQ-SE 270
Query: 510 NYNYNMQQNQSGTRNGNYDSPKPPVPAKTYGTKI 611
N+ + ++ + PKP V A Y +I
Sbjct: 271 RQEGNLHEGGRHWKHQQTEQPKPVVSAFAYWQEI 304
>UniRef50_Q24175 Cluster: CG6157-PA; n=3; Sophophora|Rep: CG6157-PA
- Drosophila melanogaster (Fruit fly)
Length = 649
Score = 34.3 bits (75), Expect = 2.6
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 9/105 (8%)
Frame = -1
Query: 543 HSDSAACCNCSSRGIVCSRPMCRLGSPSESRLRVFLVGC----REPRRRVCRVFEPLEVL 376
HS+S C C IV R C++ L F VG EP R+C VF +
Sbjct: 279 HSNS--CAGCRKEHIVGIRFRCQVCRDISLCLPCFAVGFAGGRHEPGHRMCEVFVEDQPP 336
Query: 375 ALWNSFLLKIISLLVL-----*EILRSVCAGRQVREALGLQAAPP 256
W L ++ LV+ E R C ++ ALG AA P
Sbjct: 337 LRWTRHLARLCGWLVMPRKTQEEERRGFCNAQESGPALGQSAATP 381
>UniRef50_Q16YZ3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 692
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 492 YRQYHENYNYNMQQNQSGTRNGNYDSPKPPVPAKTYGTKIDATNNS 629
Y Q H +YN + QQ+Q RN NY++ P + G+K D+T N+
Sbjct: 497 YNQSHSSYNPHSQQSQ--YRNDNYNNNNPSSGGR--GSKYDSTTNT 538
>UniRef50_A7STE7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1240
Score = 33.9 bits (74), Expect = 3.4
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +3
Query: 345 LSSGEKNSKVPILQEARKRGRLGAVAPDTPPKTLSAWTHSENQAGTSADYRQYHENYNYN 524
LS+ +++ +LQ RGR AVAP ++S EN ++ N
Sbjct: 1009 LSTAKRDDTESLLQTPEARGRSVAVAP-ARGLSVSGSVQRENNIKVEHSVKETSSGMPNN 1067
Query: 525 MQQNQSGTRNGNYDSPKPPVPAKT 596
+ + G NGN SP+P P +T
Sbjct: 1068 NSEFEKGRDNGN--SPEPHFPKET 1089
>UniRef50_P0A5D9 Cluster: Uncharacterized protein Rv1148c/MT1183;
n=35; Mycobacterium|Rep: Uncharacterized protein
Rv1148c/MT1183 - Mycobacterium tuberculosis
Length = 454
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 382 FKRLENAADSAPWLPTPHQKHSQPGLTRRTKPA 480
+K +NA WLP PH H QP + R PA
Sbjct: 410 WKTRKNAHGDTEWLPPPHLDHGQPRINRYHHPA 442
>UniRef50_UPI00006CFCBF Cluster: B-box zinc finger family protein;
n=1; Tetrahymena thermophila SB210|Rep: B-box zinc finger
family protein - Tetrahymena thermophila SB210
Length = 2680
Score = 33.5 bits (73), Expect = 4.5
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Frame = +3
Query: 333 REVILSSGEKNSKVPILQEARKRGRLGAVAPDTPPKTLSAWTHSENQAGTSADYRQYH-E 509
+++I E K+ IL ++RK+ ++ A++P + + ++++ T + Q +
Sbjct: 2454 KDMIFMIFELTKKIIILIKSRKKLKVQALSPCSDKAKSQPMQYEKDESETKSKQNQIIVD 2513
Query: 510 NYNYNMQ-----QNQSGTRNGNYDSPKPPVPAKTYGTKIDATNNSQQITVT 647
N N + Q QSG ++ +P + TY K + N Q +T T
Sbjct: 2514 NDQANFEDKYDIQKQSGKMRNSFLAPPSIISFLTYNDKRNLKNQYQDVTAT 2564
>UniRef50_Q7JR34 Cluster: GH08706p; n=3; Coelomata|Rep: GH08706p -
Drosophila melanogaster (Fruit fly)
Length = 1102
Score = 33.5 bits (73), Expect = 4.5
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +3
Query: 435 PKTLSAWTHSENQAGTSADYRQYHENY-NYNMQQNQSGTRNGNYDSPKPPVPAKTYGTKI 611
P+ SA H E AG D R+ E + N N Q SG N SP PP T
Sbjct: 625 PRPTSALNHLE--AGWEDDQRRAQEPHINVNAQIRLSGGATANSTSPSPPSNVTTATLHS 682
Query: 612 DATNNSQQ 635
+ NN Q
Sbjct: 683 SSANNLNQ 690
>UniRef50_Q23BR6 Cluster: PX domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: PX domain containing
protein - Tetrahymena thermophila SB210
Length = 1167
Score = 33.5 bits (73), Expect = 4.5
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 453 WTHSEN---QAGTSADYRQYHENYNYNMQQNQSGTRNGNYDSPKPPVPAKTYGTKIDATN 623
+T+SE Q T+ DY QY N N+Q +Q+ N NY++P V K +K++ N
Sbjct: 293 YTNSEQNMYQQQTTLDYGQYRSQNNSNLQNHQN--PNQNYNNPHAAVAHKQ--SKLEEEN 348
Query: 624 NSQ 632
S+
Sbjct: 349 TSR 351
>UniRef50_UPI00006CFEE2 Cluster: hypothetical protein TTHERM_00715680;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00715680 - Tetrahymena thermophila SB210
Length = 2075
Score = 33.1 bits (72), Expect = 6.0
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = +3
Query: 450 AWTHSENQAGTSADYRQYHENYNYNMQQNQSGTRNGNYDS-------PKPPVPAKTYGTK 608
A + ++Q A+Y+ Y N +Y +QQNQ GN S KPP ++Y +K
Sbjct: 1807 AMNYQQDQNQQEANYQGYDYNPDYELQQNQYDQNFGNQISYRSRGYFRKPPT-HRSYKSK 1865
Query: 609 IDATNNS 629
I + +NS
Sbjct: 1866 ISSEDNS 1872
>UniRef50_Q4TC05 Cluster: Chromosome undetermined SCAF7064, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7064, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 824
Score = 33.1 bits (72), Expect = 6.0
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Frame = +3
Query: 324 PIEREVILSSGEKNSKVPILQEARKRGRLGAVAPDTPPKTLSAWTHSENQAGTSADYRQ- 500
P +RE +L + + +A G GAV+ + + L+AW + A T +R+
Sbjct: 445 PADRERLLGMRRPSGRASAPPQAAPPGAAGAVSAELQQEALAAWRGLQTSAQTFQPFRKN 504
Query: 501 -----YHENYNYNMQQNQSG-TRNGNYDSPKPP 581
+E Y +QQ G T G +PP
Sbjct: 505 PSKQARYELYLSRLQQGDKGETGTGGPAGQRPP 537
>UniRef50_Q4S905 Cluster: Chromosome 7 SCAF14703, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 7
SCAF14703, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 280
Score = 33.1 bits (72), Expect = 6.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 559 TTILPNPQCPPKHTAPKLTPRIIHNRLRLP 648
++ LPNP PP T+ L P +HN +++P
Sbjct: 15 SSYLPNPPSPPSSTSASLPPSPLHNDIQVP 44
>UniRef50_Q4S066 Cluster: Chromosome undetermined SCAF14784, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14784,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 299
Score = 33.1 bits (72), Expect = 6.0
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Frame = -1
Query: 546 YHSDSAACCNCSSRGIVCSRPMCRLGSPSESRLRVFLVGCREPRRRVCRVFEPLEVLALW 367
Y S SA C C+ G VC RP C P +R+R + C V E + + ++
Sbjct: 56 YPSPSACPCTCTVDGPVCVRPKCPRVHPRCTRIRY---------QACCPVCEAMARVCVY 106
Query: 366 NSFLLKIISLLVL*EILRSVC-AGRQVREALGLQAAPPPVLGASYTVGH-CRVCQ 208
+++ L R C A R+V ++ P + +Y H C VC+
Sbjct: 107 GGRTYRLLEEFRLSRCERCRCGANREVYCSIS-DCPAPQCVNPTYEPNHCCPVCR 160
>UniRef50_A5G0Z4 Cluster: Uncharacterized protein-like protein;
n=21; Proteobacteria|Rep: Uncharacterized protein-like
protein - Acidiphilium cryptum (strain JF-5)
Length = 808
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 369 WNSFLLKIISLLVL*EILRSVCAGRQVREALGLQAAPPP 253
W F L +S E V G+ + +ALGLQ +PPP
Sbjct: 414 WGRFKLAAVSSFAFVEATGPVYVGKLLADALGLQVSPPP 452
>UniRef50_Q5KES5 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1215
Score = 33.1 bits (72), Expect = 6.0
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = +2
Query: 386 RGSKTRQTRRRGSRHPTKNTLSLDSLGEPSRHIGRLQTIPRELQLQHAAESEW 544
R + Q + + S+ P +NT++ D+ G + +G +T+P+ + ++W
Sbjct: 27 RALQASQAQPKASQLPARNTVAADNYGNRPKQLGARRTLPQPVNATSNIRAQW 79
>UniRef50_UPI00015B42DE Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 770
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -1
Query: 231 VGHCRV---CQCRWRRRMNHLMYNNRYNHDVIAITDAFDFRLIHKTQIIETLKCSRKTMK 61
VG C++ CQ ++ L+ N Y + V+ ++ FDF LI + +T++ + MK
Sbjct: 599 VGDCQIPLACQMFLEKKGKELLMKNLYRNFVLHVSSLFDFGLISPVILYQTIQKLQDLMK 658
>UniRef50_UPI00006CD15B Cluster: hypothetical protein
TTHERM_00128370; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00128370 - Tetrahymena
thermophila SB210
Length = 2063
Score = 32.7 bits (71), Expect = 7.9
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 489 DYRQYHENYNYNMQQNQSGTRNGNYDSPKPPVPAKTYGTKIDATNNSQQIT 641
D+ ++ N + Q+N +N Y S PP+P K + +++ +NSQ I+
Sbjct: 112 DFDFMEKSMNNSQQKNSLNEQNA-YQSQHPPLPPKKQNSNMNSQSNSQNIS 161
>UniRef50_A0GBP9 Cluster: Rne; ribonuclease E; n=1; Burkholderia
phytofirmans PsJN|Rep: Rne; ribonuclease E -
Burkholderia phytofirmans PsJN
Length = 457
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 192 RMNHLMYNNRYNHDVIAITDAFDFRLIHKTQIIE 91
RM +N R HD++A D F++R +H TQ E
Sbjct: 220 RMPAQQFNQRRLHDLLACLDLFEYRRLHDTQADE 253
>UniRef50_Q4CQ86 Cluster: ATPase, putative; n=3; Trypanosoma
cruzi|Rep: ATPase, putative - Trypanosoma cruzi
Length = 138
Score = 32.7 bits (71), Expect = 7.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 528 ACCNCSSRGIVCSRPMCRLGSPSESRLRVFLVGCREPRRRVCR 400
+CC RG VCS P C +P+++ + L C P R+ R
Sbjct: 44 SCCTLPVRGAVCSPPNCSTRTPTDTLMTTAL--CASPAARMRR 84
>UniRef50_Q0U8M3 Cluster: Putative uncharacterized protein; n=3;
Eukaryota|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1113
Score = 32.7 bits (71), Expect = 7.9
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 317 KISYRTRSDIIFRRKEFQSANTSRG-SKTRQTRRRGSRHPTKNTLSLDSLGEPSRHIGRL 493
KI Y+T D I +RK ++ R KT + + P + T + +++ E + RL
Sbjct: 751 KIKYKTLDDKIRKRKMSDASTDDRSIKKTPNVSAKSTPAPPERTATPEAVRERRQEEQRL 810
Query: 494 QTIPRELQLQHAAESE 541
+T R+ + AA+ E
Sbjct: 811 ETEARKRAAEAAAQEE 826
>UniRef50_P20659 Cluster: Protein trithorax; n=4; Drosophila
melanogaster|Rep: Protein trithorax - Drosophila
melanogaster (Fruit fly)
Length = 3726
Score = 32.7 bits (71), Expect = 7.9
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 435 PKTLSAWTHSENQAGTSADYRQYHENYNYNMQQNQSGTRNGNYDSPK-PPVP 587
PK L + S+N G+ + + + Y + QQ Q RN N + P+ P+P
Sbjct: 1545 PKALQFSSGSDNGLGSDGESQNSDDVYEFKDQQQQQQQRNANMNKPRVKPLP 1596
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,295,904
Number of Sequences: 1657284
Number of extensions: 14491921
Number of successful extensions: 56814
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 51408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56437
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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