Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0880
(648 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 30 0.019
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 30 0.019
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 25 0.54
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 25 0.54
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 25 0.54
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 25 0.54
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 25 0.71
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 25 0.71
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 24 0.94
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 24 0.94
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 23 2.9
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 22 3.8
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 22 5.0
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 22 5.0
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 21 6.6
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 21 8.7
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 21 8.7
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 8.7
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 8.7
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 21 8.7
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 29.9 bits (64), Expect = 0.019
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +3
Query: 303 HTHSAKFPIEREVILSSGEKNSKVPILQEARKRGRLGAVAPDTPPKTLSA--WTHSENQA 476
H A + ++ + E + KV + G ++P+ P T +A + Q
Sbjct: 412 HEPGAAYYQNENMLQKNAEYSGKVGYYENNHYNGDPNYISPEVFPNTNNAIMTPPASVQT 471
Query: 477 GTSADYRQYHENYNYNMQQNQSGTRNGNYDS 569
+S +Y +H+ Y+ QNQ N +S
Sbjct: 472 ESSDNYNSFHQFYSSESSQNQVAPTGENSNS 502
Score = 22.6 bits (46), Expect = 2.9
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +3
Query: 417 VAPDTPPKTLSAWTHSENQAGTSADYR--QYHENYNYNMQQN 536
V+ PP H NQ + +YR + H +Y M QN
Sbjct: 269 VSNTIPPFASRGSMHFPNQYQMNQEYRTDRKHTQQHYQMNQN 310
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 29.9 bits (64), Expect = 0.019
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +3
Query: 303 HTHSAKFPIEREVILSSGEKNSKVPILQEARKRGRLGAVAPDTPPKTLSA--WTHSENQA 476
H A + ++ + E + KV + G ++P+ P T +A + Q
Sbjct: 360 HEPGAAYYQNENMLQKNAEYSGKVGYYENNHYNGDPNYISPEVFPNTNNAIMTPPASVQT 419
Query: 477 GTSADYRQYHENYNYNMQQNQSGTRNGNYDS 569
+S +Y +H+ Y+ QNQ N +S
Sbjct: 420 ESSDNYNSFHQFYSSESSQNQVAPTGENSNS 450
Score = 22.6 bits (46), Expect = 2.9
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +3
Query: 417 VAPDTPPKTLSAWTHSENQAGTSADYR--QYHENYNYNMQQN 536
V+ PP H NQ + +YR + H +Y M QN
Sbjct: 217 VSNTIPPFASRGSMHFPNQYQMNQEYRTDRKHTQQHYQMNQN 258
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 25.0 bits (52), Expect = 0.54
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 501 YHENYNYNMQQNQSGTRNGNYDSPK 575
YH + NYN +G GNY P+
Sbjct: 64 YHNHQNYNSNVLSNGYGYGNYYHPQ 88
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 25.0 bits (52), Expect = 0.54
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 501 YHENYNYNMQQNQSGTRNGNYDSPK 575
YH + NYN +G GNY P+
Sbjct: 64 YHNHQNYNSNVLSNGYGYGNYYHPQ 88
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 25.0 bits (52), Expect = 0.54
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 501 YHENYNYNMQQNQSGTRNGNYDSPK 575
YH + NYN +G GNY P+
Sbjct: 64 YHNHQNYNSNVLSNGYGYGNYYHPQ 88
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 25.0 bits (52), Expect = 0.54
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 501 YHENYNYNMQQNQSGTRNGNYDSPK 575
YH + NYN +G GNY P+
Sbjct: 64 YHNHQNYNSNVLSNGYGYGNYYHPQ 88
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 24.6 bits (51), Expect = 0.71
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 471 QAGTSADYRQYHENYNYNMQQNQSGTRNGNY 563
Q T + Y+ +N+N Q NQ+ + NY
Sbjct: 197 QYDTESSYQFNDPQFNFNYQYNQAYSNYNNY 227
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 24.6 bits (51), Expect = 0.71
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 471 QAGTSADYRQYHENYNYNMQQNQSGTRNGNY 563
Q T + Y+ +N+N Q NQ+ + NY
Sbjct: 217 QYDTESSYQFNDPQFNFNYQYNQAYSNYNNY 247
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 24.2 bits (50), Expect = 0.94
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 255 PVLGASYTVGHCRVCQCRWRRRMNHLMYNN 166
P + T G+ VC+ RWR+ N + + N
Sbjct: 364 PSINDDGTCGNGYVCEHRWRQIFNMVGFRN 393
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 24.2 bits (50), Expect = 0.94
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 255 PVLGASYTVGHCRVCQCRWRRRMNHLMYNN 166
P + T G+ VC+ RWR+ N + + N
Sbjct: 365 PSINDDGTCGNGYVCEHRWRQIFNMVGFRN 394
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 22.6 bits (46), Expect = 2.9
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +3
Query: 417 VAPDTPPKTLSAWTHSENQAGTSADYR--QYHENYNYNMQQN 536
V+ PP H NQ + +YR + H +Y M QN
Sbjct: 400 VSNTIPPFASRGSMHFPNQYQMNQEYRTDRKHTQQHYQMNQN 441
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 22.2 bits (45), Expect = 3.8
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = -1
Query: 546 YHSDSAACCNCSSRGIVCSRPMCRLGSPSESRLRVFLVGCREPRRRVC 403
YH+ S AC +C C R C G ++ + V P VC
Sbjct: 66 YHTLSKACYDCPYNTQDCYREDCIPGDGNKRSIIVVNRKMPGPSVEVC 113
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = +3
Query: 411 GAVAPD-TPPKTLSAWTHSENQAGTSADYRQYHENYNYNMQQNQSGTRNGNYDSPKPP 581
G + P +PP T + + + Q+H+ ++ G + N PP
Sbjct: 147 GVLGPTGSPPLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPP 204
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = +3
Query: 411 GAVAPD-TPPKTLSAWTHSENQAGTSADYRQYHENYNYNMQQNQSGTRNGNYDSPKPP 581
G + P +PP T + + + Q+H+ ++ G + N PP
Sbjct: 149 GVLGPTGSPPLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPP 206
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 259 RRCLESQRLPDLPPC 303
+ C ES+ + D PPC
Sbjct: 1 KNCSESKAICDNPPC 15
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 344 YHFSFYRKFCGV 309
YH YRKFC +
Sbjct: 29 YHKEKYRKFCRI 40
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/25 (24%), Positives = 16/25 (64%)
Frame = -1
Query: 126 DFRLIHKTQIIETLKCSRKTMKGFN 52
++ L+ +++ L+C+ T +GF+
Sbjct: 167 EYILMQTNKLVLALECNNSTSEGFD 191
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/25 (24%), Positives = 16/25 (64%)
Frame = -1
Query: 126 DFRLIHKTQIIETLKCSRKTMKGFN 52
++ L+ +++ L+C+ T +GF+
Sbjct: 167 EYILMQTNKLVLALECNNSTSEGFD 191
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/25 (24%), Positives = 16/25 (64%)
Frame = -1
Query: 126 DFRLIHKTQIIETLKCSRKTMKGFN 52
++ L+ +++ L+C+ T +GF+
Sbjct: 167 EYILMQTNKLVLALECNNSTSEGFD 191
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +3
Query: 570 PKPPVPAKTYGTKIDATNNSQQITVT 647
P PP P++ K NN+ ++ T
Sbjct: 72 PSPPAPSELPALKSRKLNNNNVVSST 97
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,623
Number of Sequences: 336
Number of extensions: 3478
Number of successful extensions: 24
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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