Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0880
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D21852-1|BAA04878.2| 974|Homo sapiens KIAA0029 protein. 31 3.5
BC041093-1|AAH41093.1| 1099|Homo sapiens R3H domain containing 1... 31 3.5
AC011893-1|AAX88922.1| 314|Homo sapiens unknown protein. 31 3.5
U71268-1|AAD00180.1| 575|Homo sapiens potential transcriptional... 30 6.2
U71267-1|AAD00179.1| 642|Homo sapiens potential transcriptional... 30 6.2
AY620824-1|AAT39519.1| 768|Homo sapiens AIDA-1bDelta Ank-2 prot... 30 6.2
AY283057-1|AAP38184.2| 750|Homo sapiens AIDA-1bDAnk protein. 30 6.2
AY281131-1|AAP37612.1| 1249|Homo sapiens AIDA-1b protein. 30 6.2
AL360182-1|CAI15474.1| 226|Homo sapiens MAX interactor 1 protein. 30 6.2
AK074671-1|BAC11125.1| 565|Homo sapiens protein ( Homo sapiens ... 30 6.2
AF180475-1|AAF29829.1| 433|Homo sapiens Not4-Np protein. 30 6.2
AF145204-1|AAD33951.1| 955|Homo sapiens E2a-Pbx1-associated pro... 30 6.2
BC096320-1|AAH96320.1| 797|Homo sapiens solute carrier family 6... 30 8.2
BC096319-1|AAH96319.1| 797|Homo sapiens solute carrier family 6... 30 8.2
AF352733-1|AAK29670.1| 797|Homo sapiens glycine type 2 transpor... 30 8.2
AF117999-1|AAK12641.1| 797|Homo sapiens sodium- and chloride-de... 30 8.2
AF085412-1|AAC95145.1| 797|Homo sapiens glycine transporter GLY... 30 8.2
>D21852-1|BAA04878.2| 974|Homo sapiens KIAA0029 protein.
Length = 974
Score = 31.1 bits (67), Expect = 3.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 283 LPDLPP-CTHTPQNFL*NEK*YYLQEKRIPKCQYFKRLENAADSAPWLPTP 432
+P+ P C H+P + N+ YY +R KC F ++N +P L +P
Sbjct: 712 VPNNPQSCAHSPPQWKQNK--YYCDHQRGQKCVEFSSVDNIVQHSPQLSSP 760
>BC041093-1|AAH41093.1| 1099|Homo sapiens R3H domain containing 1
protein.
Length = 1099
Score = 31.1 bits (67), Expect = 3.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 283 LPDLPP-CTHTPQNFL*NEK*YYLQEKRIPKCQYFKRLENAADSAPWLPTP 432
+P+ P C H+P + N+ YY +R KC F ++N +P L +P
Sbjct: 837 VPNNPQSCAHSPPQWKQNK--YYCDHQRGQKCVEFSSVDNIVQHSPQLSSP 885
>AC011893-1|AAX88922.1| 314|Homo sapiens unknown protein.
Length = 314
Score = 31.1 bits (67), Expect = 3.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 283 LPDLPP-CTHTPQNFL*NEK*YYLQEKRIPKCQYFKRLENAADSAPWLPTP 432
+P+ P C H+P + N+ YY +R KC F ++N +P L +P
Sbjct: 52 VPNNPQSCAHSPPQWKQNK--YYCDHQRGQKCVEFSSVDNIVQHSPQLSSP 100
>U71268-1|AAD00180.1| 575|Homo sapiens potential transcriptional
repressor NOT4Hp protein.
Length = 575
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 447 SAWTHSENQAGTSADYRQYHENYNYNMQQNQSGTRNGNYDSPKPPV-PAKTYGTKIDATN 623
+++T E QAG +Y Q Y + N G+ D K V P + Y T ID +
Sbjct: 221 ASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPS 280
Query: 624 NSQQI 638
+S I
Sbjct: 281 DSLSI 285
>U71267-1|AAD00179.1| 642|Homo sapiens potential transcriptional
repressor NOT4Hp protein.
Length = 642
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 447 SAWTHSENQAGTSADYRQYHENYNYNMQQNQSGTRNGNYDSPKPPV-PAKTYGTKIDATN 623
+++T E QAG +Y Q Y + N G+ D K V P + Y T ID +
Sbjct: 221 ASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPS 280
Query: 624 NSQQI 638
+S I
Sbjct: 281 DSLSI 285
>AY620824-1|AAT39519.1| 768|Homo sapiens AIDA-1bDelta Ank-2
protein.
Length = 768
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +2
Query: 311 LRKISYRTRSDIIFRRKEFQSANTSRGSKTRQTRRRGSRHPTKNTLSLDSLGEPSRHIGR 490
++KI + S IF +K Q N + TR TR GSR+ + ++ E + +GR
Sbjct: 237 VKKIKPKVVSRTIFHKKSNQLENHTIVG-TRSTRS-GSRNGDQWVMNAGGFVERACTLGR 294
Query: 491 LQTIPRELQLQHAAES 538
++++P+ L H ++S
Sbjct: 295 IRSLPKALIDMHLSKS 310
>AY283057-1|AAP38184.2| 750|Homo sapiens AIDA-1bDAnk protein.
Length = 750
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +2
Query: 311 LRKISYRTRSDIIFRRKEFQSANTSRGSKTRQTRRRGSRHPTKNTLSLDSLGEPSRHIGR 490
++KI + S IF +K Q N + TR TR GSR+ + ++ E + +GR
Sbjct: 227 VKKIKPKVVSRTIFHKKSNQLENHTIVG-TRSTRS-GSRNGDQWVMNAGGFVERACTLGR 284
Query: 491 LQTIPRELQLQHAAES 538
++++P+ L H ++S
Sbjct: 285 IRSLPKALIDMHLSKS 300
>AY281131-1|AAP37612.1| 1249|Homo sapiens AIDA-1b protein.
Length = 1249
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +2
Query: 311 LRKISYRTRSDIIFRRKEFQSANTSRGSKTRQTRRRGSRHPTKNTLSLDSLGEPSRHIGR 490
++KI + S IF +K Q N + TR TR GSR+ + ++ E + +GR
Sbjct: 662 VKKIKPKVVSRTIFHKKSNQLENHTIVG-TRSTRS-GSRNGDQWVMNAGGFVERACTLGR 719
Query: 491 LQTIPRELQLQHAAES 538
++++P+ L H ++S
Sbjct: 720 IRSLPKALIDMHLSKS 735
>AL360182-1|CAI15474.1| 226|Homo sapiens MAX interactor 1 protein.
Length = 226
Score = 30.3 bits (65), Expect = 6.2
Identities = 35/137 (25%), Positives = 52/137 (37%), Gaps = 3/137 (2%)
Frame = +1
Query: 199 PPALAHSTVSHRIGCPQHRRRRCLESQRLPDLPPCTHTPQNFL*NEK*YYLQ--EKRIPK 372
PPAL + CP E+ + Q L E YL+ EK K
Sbjct: 35 PPALPEDPAGAKPRCPFSDIFNTSENSMEKHINTFLQNVQILL--EAASYLEQIEKENKK 92
Query: 373 CQYFKRLENAADSAPWLPTPHQKHSQPGLTRRTKPAHRPXXXXXXXXXXXXCSRIRVVLE 552
C++ A S P +P+P +HS+P RR A + + +R+ LE
Sbjct: 93 CEH-----GYASSFPSMPSPRLQHSKP--PRRLSRAQKHSSGSSNTSTANRRAHLRLCLE 145
Query: 553 MATTILP-NPQCPPKHT 600
++P P C +HT
Sbjct: 146 RLKVLIPLGPDC-TRHT 161
>AK074671-1|BAC11125.1| 565|Homo sapiens protein ( Homo sapiens
cDNA FLJ90190 fis, clone MAMMA1001094, highly similar to
Human potential transcriptional repressor NOT4Hp (NOT4H)
mRNA. ).
Length = 565
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 447 SAWTHSENQAGTSADYRQYHENYNYNMQQNQSGTRNGNYDSPKPPV-PAKTYGTKIDATN 623
+++T E QAG +Y Q Y + N G+ D K V P + Y T ID +
Sbjct: 19 ASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPS 78
Query: 624 NSQQI 638
+S I
Sbjct: 79 DSLSI 83
>AF180475-1|AAF29829.1| 433|Homo sapiens Not4-Np protein.
Length = 433
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 447 SAWTHSENQAGTSADYRQYHENYNYNMQQNQSGTRNGNYDSPKPPV-PAKTYGTKIDATN 623
+++T E QAG +Y Q Y + N G+ D K V P + Y T ID +
Sbjct: 221 ASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPS 280
Query: 624 NSQQI 638
+S I
Sbjct: 281 DSLSI 285
>AF145204-1|AAD33951.1| 955|Homo sapiens E2a-Pbx1-associated
protein protein.
Length = 955
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +2
Query: 311 LRKISYRTRSDIIFRRKEFQSANTSRGSKTRQTRRRGSRHPTKNTLSLDSLGEPSRHIGR 490
++KI + S IF +K Q N + TR TR GSR+ + ++ E + +GR
Sbjct: 368 VKKIKPKVVSRTIFHKKSNQLENHTIVG-TRSTRS-GSRNGDQWVMNAGGFVERACTLGR 425
Query: 491 LQTIPRELQLQHAAES 538
++++P+ L H ++S
Sbjct: 426 IRSLPKALIDMHLSKS 441
>BC096320-1|AAH96320.1| 797|Homo sapiens solute carrier family 6
(neurotransmitter transporter, glycine), member 5
protein.
Length = 797
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 297 RQVREALGLQAAPPPVLGASYTVGHCRVCQCR 202
R +REA G QA+PPP HC++ R
Sbjct: 95 RDLREAQGAQASPPPGSSGPGNALHCKIPSLR 126
>BC096319-1|AAH96319.1| 797|Homo sapiens solute carrier family 6
(neurotransmitter transporter, glycine), member 5
protein.
Length = 797
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 297 RQVREALGLQAAPPPVLGASYTVGHCRVCQCR 202
R +REA G QA+PPP HC++ R
Sbjct: 95 RDLREAQGAQASPPPGSSGPGNALHCKIPSLR 126
>AF352733-1|AAK29670.1| 797|Homo sapiens glycine type 2 transporter
variant SC6 protein.
Length = 797
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 297 RQVREALGLQAAPPPVLGASYTVGHCRVCQCR 202
R +REA G QA+PPP HC++ R
Sbjct: 95 RDLREAQGAQASPPPGSSGPGNALHCKIPSLR 126
>AF117999-1|AAK12641.1| 797|Homo sapiens sodium- and
chloride-dependent glycine transporter type II protein.
Length = 797
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 297 RQVREALGLQAAPPPVLGASYTVGHCRVCQCR 202
R +REA G QA+PPP HC++ R
Sbjct: 95 RDLREAQGAQASPPPGSSGPGNALHCKIPSLR 126
>AF085412-1|AAC95145.1| 797|Homo sapiens glycine transporter GLYT2
protein.
Length = 797
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 297 RQVREALGLQAAPPPVLGASYTVGHCRVCQCR 202
R +REA G QA+PPP HC++ R
Sbjct: 95 RDLREAQGAQASPPPGSSGPGNALHCKIPSLR 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,882,444
Number of Sequences: 237096
Number of extensions: 2258499
Number of successful extensions: 7227
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7227
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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